BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003690
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279490.2| PREDICTED: translation initiation factor IF-...   105   4e-36
ref|XP_002509907.1| mitochondrial translational initiation facto...    92   8e-33
ref|XP_002297989.1| predicted protein [Populus trichocarpa] gi|2...    92   4e-32
tpg|DAA37623.1| TPA: putative translation elongation/initiation ...    92   1e-31
ref|XP_004149759.1| PREDICTED: translation initiation factor IF-...    92   9e-31

>ref|XP_002279490.2| PREDICTED: translation initiation factor IF-2-like [Vitis vinifera]
           gi|296089697|emb|CBI39516.3| unnamed protein product
           [Vitis vinifera]
          Length = 725

 Score =  105 bits (263), Expect(2) = 4e-36
 Identities = 50/64 (78%), Positives = 60/64 (93%)
 Frame = -2

Query: 193 QSANRASIQIKVHRVIYHLLEDLGNFSVDKAPGTLETQVAGEAQVLSIFELKGRTKSQGG 14
           Q+A+RASI++K+HRVIYHLLED+GN  VDKAPGT ETQVAGEAQVL+IFELKGR+KS+G 
Sbjct: 573 QAASRASIKVKIHRVIYHLLEDIGNLIVDKAPGTFETQVAGEAQVLNIFELKGRSKSKGD 632

Query: 13  DMKI 2
           D+KI
Sbjct: 633 DVKI 636



 Score = 70.9 bits (172), Expect(2) = 4e-36
 Identities = 32/39 (82%), Positives = 36/39 (92%)
 Frame = -3

Query: 306 VFVNIVHVGVGIISQSDVDLAQACGACIVGFNIRSPPNS 190
           VFVN+VHVGVG ISQSDVDLAQAC ACIVGFN+++PP S
Sbjct: 532 VFVNVVHVGVGPISQSDVDLAQACHACIVGFNVKNPPTS 570


>ref|XP_002509907.1| mitochondrial translational initiation factor, putative [Ricinus
           communis] gi|223549806|gb|EEF51294.1| mitochondrial
           translational initiation factor, putative [Ricinus
           communis]
          Length = 458

 Score = 92.4 bits (228), Expect(2) = 8e-33
 Identities = 45/63 (71%), Positives = 55/63 (87%)
 Frame = -2

Query: 190 SANRASIQIKVHRVIYHLLEDLGNFSVDKAPGTLETQVAGEAQVLSIFELKGRTKSQGGD 11
           +A +A I+I  HRVIYHLLE++GN  VDKAPGT ETQVAGEA+VL+IFELKGR+K+ GGD
Sbjct: 307 AATQARIKIMQHRVIYHLLEEVGNLIVDKAPGTSETQVAGEAEVLNIFELKGRSKAIGGD 366

Query: 10  MKI 2
           +KI
Sbjct: 367 IKI 369



 Score = 73.2 bits (178), Expect(2) = 8e-33
 Identities = 32/39 (82%), Positives = 38/39 (97%)
 Frame = -3

Query: 306 VFVNIVHVGVGIISQSDVDLAQACGACIVGFNIRSPPNS 190
           VFVN+VHVGVG ISQSDVDLAQACGACIVGFN+++PP++
Sbjct: 265 VFVNVVHVGVGPISQSDVDLAQACGACIVGFNVKTPPSA 303


>ref|XP_002297989.1| predicted protein [Populus trichocarpa] gi|222845247|gb|EEE82794.1|
           predicted protein [Populus trichocarpa]
          Length = 588

 Score = 92.0 bits (227), Expect(2) = 4e-32
 Identities = 44/64 (68%), Positives = 56/64 (87%)
 Frame = -2

Query: 193 QSANRASIQIKVHRVIYHLLEDLGNFSVDKAPGTLETQVAGEAQVLSIFELKGRTKSQGG 14
           Q+A +A  +I  H+VIYHLL+++GN  VDKAPGTLETQVAGEA+VL+IFEL+GR+KS GG
Sbjct: 436 QAAIQAGTKIMQHQVIYHLLDEVGNLIVDKAPGTLETQVAGEAEVLNIFELRGRSKSAGG 495

Query: 13  DMKI 2
           D+KI
Sbjct: 496 DIKI 499



 Score = 71.2 bits (173), Expect(2) = 4e-32
 Identities = 33/39 (84%), Positives = 37/39 (94%)
 Frame = -3

Query: 306 VFVNIVHVGVGIISQSDVDLAQACGACIVGFNIRSPPNS 190
           VFVN+VHVGVG ISQSDVDLAQACGA IVGFN++SPP+S
Sbjct: 395 VFVNVVHVGVGPISQSDVDLAQACGAYIVGFNVKSPPSS 433


>tpg|DAA37623.1| TPA: putative translation elongation/initiation factor family
           protein [Zea mays]
          Length = 712

 Score = 91.7 bits (226), Expect(2) = 1e-31
 Identities = 43/67 (64%), Positives = 58/67 (86%)
 Frame = -2

Query: 202 PTKQSANRASIQIKVHRVIYHLLEDLGNFSVDKAPGTLETQVAGEAQVLSIFELKGRTKS 23
           P  Q+A RA+I++ +H+VIYHLLE++G   V+KAPGT ETQV+GEA+VL+IFELKGR+KS
Sbjct: 557 PITQAAARANIKVLLHKVIYHLLEEMGKAIVEKAPGTAETQVSGEAEVLNIFELKGRSKS 616

Query: 22  QGGDMKI 2
           +G D+KI
Sbjct: 617 KGPDVKI 623



 Score = 69.7 bits (169), Expect(2) = 1e-31
 Identities = 33/43 (76%), Positives = 37/43 (86%)
 Frame = -3

Query: 321 ITSFLVFVNIVHVGVGIISQSDVDLAQACGACIVGFNIRSPPN 193
           + S  VFVN+VHVGVG ISQ D+DLAQACGA IVGFNIRSPP+
Sbjct: 514 LNSAQVFVNVVHVGVGPISQHDIDLAQACGAYIVGFNIRSPPS 556


>ref|XP_004149759.1| PREDICTED: translation initiation factor IF-2-like [Cucumis
           sativus]
          Length = 724

 Score = 92.0 bits (227), Expect(2) = 9e-31
 Identities = 44/64 (68%), Positives = 55/64 (85%)
 Frame = -2

Query: 193 QSANRASIQIKVHRVIYHLLEDLGNFSVDKAPGTLETQVAGEAQVLSIFELKGRTKSQGG 14
           QSA +A  +I +HRVIYHLLED+GN  VDKAPGT ET+VAGE +VL+IFELKGR+KS+G 
Sbjct: 572 QSATQAGTKIIIHRVIYHLLEDVGNLIVDKAPGTSETRVAGEGEVLNIFELKGRSKSKGP 631

Query: 13  DMKI 2
           D++I
Sbjct: 632 DIRI 635



 Score = 66.6 bits (161), Expect(2) = 9e-31
 Identities = 30/39 (76%), Positives = 36/39 (92%)
 Frame = -3

Query: 306 VFVNIVHVGVGIISQSDVDLAQACGACIVGFNIRSPPNS 190
           VFVN+VHVGVG +SQSDVDLAQAC A IVGFN+++PP+S
Sbjct: 531 VFVNVVHVGVGPVSQSDVDLAQACKAYIVGFNVKNPPSS 569