BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003683
         (1560 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276200.2| PREDICTED: isocitrate dehydrogenase [NADP]-l...   756   0.0  
emb|CBI34891.3| unnamed protein product [Vitis vinifera]              756   0.0  
ref|XP_003581407.1| PREDICTED: isocitrate dehydrogenase [NADP], ...   755   0.0  
ref|XP_003618179.1| Isocitrate dehydrogenase-like protein [Medic...   749   0.0  
ref|XP_002873679.1| hypothetical protein ARALYDRAFT_488300 [Arab...   744   0.0  

>ref|XP_002276200.2| PREDICTED: isocitrate dehydrogenase [NADP]-like [Vitis vinifera]
          Length = 486

 Score =  756 bits (1952), Expect = 0.0
 Identities = 376/467 (80%), Positives = 410/467 (87%), Gaps = 6/467 (1%)
 Frame = -2

Query: 1547 RLGAMS--TFTPSPSSLALKTSPFSINSNSHYLNTLSLKPHT---NFFRNASLRCFASSS 1383
            R GAMS     PS SSLALK    SI+S+  + N +  K  +   + F NASLRCFAS++
Sbjct: 10   RFGAMSGAAIFPSSSSLALKNPNLSISSDQRFFNGILFKNGSILHDRFPNASLRCFASAA 69

Query: 1382 -IDRIKVYNPIVEMDGDEMARVMWKMIKDKLINPYLDLDIKYYDLGILNRDATDDKVTVE 1206
              DR++V NPIVEMDGDEMAR+MW+MIKDKLI PYLDLDI+Y+DLGILNRDATDDKVTVE
Sbjct: 70   TFDRVRVQNPIVEMDGDEMARIMWRMIKDKLIFPYLDLDIRYFDLGILNRDATDDKVTVE 129

Query: 1205 SALATLKYNVAVKCATITPDEGRVKEFGLKSMWRSPNGTIRNILNGTVFREPILCKNIPR 1026
            SA ATLKYNVAVKCATITPDE RVKEFGLKSMWRSPNGTIRNILNGTVFREPILC+N+PR
Sbjct: 130  SAEATLKYNVAVKCATITPDEARVKEFGLKSMWRSPNGTIRNILNGTVFREPILCQNVPR 189

Query: 1025 IVSGWKKAICIGRHAFGDQYRATDAVISGPGKLKMVFVPAEGGTPVELDVHEFKGPGIAL 846
            IV GWKK ICIGRHAFGDQYRATD V+ GPGKLK+VF P  G  PVEL+V++FKGPGIAL
Sbjct: 190  IVPGWKKPICIGRHAFGDQYRATDTVVEGPGKLKLVFAPENGDPPVELNVYDFKGPGIAL 249

Query: 845  AMYNVDESIRAFAESSMAMALEKKWPLYLSTKNTILKKYDGRFKDIFQEAYEENWKQKFE 666
            AMYNVDESIRAFAESSM++A  KKWPLYLSTKNTILKKYDGRFKDIFQ+ YEENWKQKFE
Sbjct: 250  AMYNVDESIRAFAESSMSLAFAKKWPLYLSTKNTILKKYDGRFKDIFQDVYEENWKQKFE 309

Query: 665  ENSIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLLSSDG 486
            E+SIWYEHRLIDDMVAYALKS+GGYVWACKNYDGDVQSD LAQGFGSLGLMTSVLLSSDG
Sbjct: 310  EHSIWYEHRLIDDMVAYALKSDGGYVWACKNYDGDVQSDLLAQGFGSLGLMTSVLLSSDG 369

Query: 485  KTLEAEAAHGTVTRHFRLDQKGQETSTNSIASIFAWTRGLEHRGKLDKHEQLLDFVSNLE 306
            KTLEAEAAHGTVTRHFR  QKG ETSTNSIASIFAWTRGLEHR KLDK+E+LLDFV  LE
Sbjct: 370  KTLEAEAAHGTVTRHFRQYQKGLETSTNSIASIFAWTRGLEHRAKLDKNERLLDFVHKLE 429

Query: 305  TACVETVETGKMTKDLALLMHGSKVSRDLYLNTEEFIDAVAQNLETK 165
             AC+ETVE+G MTKDLA+L+HG K S++ YLNTEEFID VA NLE K
Sbjct: 430  AACIETVESGNMTKDLAILIHGPKASKEFYLNTEEFIDTVAHNLEAK 476


>emb|CBI34891.3| unnamed protein product [Vitis vinifera]
          Length = 540

 Score =  756 bits (1952), Expect = 0.0
 Identities = 376/467 (80%), Positives = 410/467 (87%), Gaps = 6/467 (1%)
 Frame = -2

Query: 1547 RLGAMS--TFTPSPSSLALKTSPFSINSNSHYLNTLSLKPHT---NFFRNASLRCFASSS 1383
            R GAMS     PS SSLALK    SI+S+  + N +  K  +   + F NASLRCFAS++
Sbjct: 64   RFGAMSGAAIFPSSSSLALKNPNLSISSDQRFFNGILFKNGSILHDRFPNASLRCFASAA 123

Query: 1382 -IDRIKVYNPIVEMDGDEMARVMWKMIKDKLINPYLDLDIKYYDLGILNRDATDDKVTVE 1206
              DR++V NPIVEMDGDEMAR+MW+MIKDKLI PYLDLDI+Y+DLGILNRDATDDKVTVE
Sbjct: 124  TFDRVRVQNPIVEMDGDEMARIMWRMIKDKLIFPYLDLDIRYFDLGILNRDATDDKVTVE 183

Query: 1205 SALATLKYNVAVKCATITPDEGRVKEFGLKSMWRSPNGTIRNILNGTVFREPILCKNIPR 1026
            SA ATLKYNVAVKCATITPDE RVKEFGLKSMWRSPNGTIRNILNGTVFREPILC+N+PR
Sbjct: 184  SAEATLKYNVAVKCATITPDEARVKEFGLKSMWRSPNGTIRNILNGTVFREPILCQNVPR 243

Query: 1025 IVSGWKKAICIGRHAFGDQYRATDAVISGPGKLKMVFVPAEGGTPVELDVHEFKGPGIAL 846
            IV GWKK ICIGRHAFGDQYRATD V+ GPGKLK+VF P  G  PVEL+V++FKGPGIAL
Sbjct: 244  IVPGWKKPICIGRHAFGDQYRATDTVVEGPGKLKLVFAPENGDPPVELNVYDFKGPGIAL 303

Query: 845  AMYNVDESIRAFAESSMAMALEKKWPLYLSTKNTILKKYDGRFKDIFQEAYEENWKQKFE 666
            AMYNVDESIRAFAESSM++A  KKWPLYLSTKNTILKKYDGRFKDIFQ+ YEENWKQKFE
Sbjct: 304  AMYNVDESIRAFAESSMSLAFAKKWPLYLSTKNTILKKYDGRFKDIFQDVYEENWKQKFE 363

Query: 665  ENSIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLLSSDG 486
            E+SIWYEHRLIDDMVAYALKS+GGYVWACKNYDGDVQSD LAQGFGSLGLMTSVLLSSDG
Sbjct: 364  EHSIWYEHRLIDDMVAYALKSDGGYVWACKNYDGDVQSDLLAQGFGSLGLMTSVLLSSDG 423

Query: 485  KTLEAEAAHGTVTRHFRLDQKGQETSTNSIASIFAWTRGLEHRGKLDKHEQLLDFVSNLE 306
            KTLEAEAAHGTVTRHFR  QKG ETSTNSIASIFAWTRGLEHR KLDK+E+LLDFV  LE
Sbjct: 424  KTLEAEAAHGTVTRHFRQYQKGLETSTNSIASIFAWTRGLEHRAKLDKNERLLDFVHKLE 483

Query: 305  TACVETVETGKMTKDLALLMHGSKVSRDLYLNTEEFIDAVAQNLETK 165
             AC+ETVE+G MTKDLA+L+HG K S++ YLNTEEFID VA NLE K
Sbjct: 484  AACIETVESGNMTKDLAILIHGPKASKEFYLNTEEFIDTVAHNLEAK 530


>ref|XP_003581407.1| PREDICTED: isocitrate dehydrogenase [NADP], chloroplastic-like
            [Brachypodium distachyon]
          Length = 481

 Score =  755 bits (1949), Expect = 0.0
 Identities = 376/474 (79%), Positives = 418/474 (88%), Gaps = 6/474 (1%)
 Frame = -2

Query: 1547 RLGAMSTFTPSPSSLALKTSPFSINSNSHYLNTLSLKPHTN--FFRNASLRCFASSSI-- 1380
            RL  M+    S ++ AL  +P  + +     + L+  P      FR ASLRC+A+++   
Sbjct: 9    RLIPMAPLPSSAATKALLLNPAPVPARGRLHSPLACLPAPGGRSFRGASLRCYAAAAAVA 68

Query: 1379 --DRIKVYNPIVEMDGDEMARVMWKMIKDKLINPYLDLDIKYYDLGILNRDATDDKVTVE 1206
               RIKV NPIVEMDGDEM RV+WKMIKDKLI PYL+LD+KY+DLG+LNRDATDDKVTVE
Sbjct: 69   EHQRIKVQNPIVEMDGDEMTRVIWKMIKDKLIFPYLELDVKYFDLGVLNRDATDDKVTVE 128

Query: 1205 SALATLKYNVAVKCATITPDEGRVKEFGLKSMWRSPNGTIRNILNGTVFREPILCKNIPR 1026
            SA ATL+YNVAVKCATITPDE RVKEF LKSMWRSPNGTIRNILNGTVFREPILCKNIPR
Sbjct: 129  SAEATLEYNVAVKCATITPDETRVKEFKLKSMWRSPNGTIRNILNGTVFREPILCKNIPR 188

Query: 1025 IVSGWKKAICIGRHAFGDQYRATDAVISGPGKLKMVFVPAEGGTPVELDVHEFKGPGIAL 846
            I+SGWKK ICIGRHAFGDQYRATD +I+GPGKLKMVFVP +GG PVEL+VH+FKGPG+AL
Sbjct: 189  ILSGWKKPICIGRHAFGDQYRATDTIINGPGKLKMVFVP-DGGEPVELNVHDFKGPGVAL 247

Query: 845  AMYNVDESIRAFAESSMAMALEKKWPLYLSTKNTILKKYDGRFKDIFQEAYEENWKQKFE 666
            AMYNVDESIRAFAESSMAMAL KKWPLYLSTKNTILKKYDGRFKDIFQE YEENWK+KFE
Sbjct: 248  AMYNVDESIRAFAESSMAMALSKKWPLYLSTKNTILKKYDGRFKDIFQEVYEENWKEKFE 307

Query: 665  ENSIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLLSSDG 486
            ENSIWYEHRLIDDMVAYA+KSEGGYVWACKNYDGDVQSDFLAQGFGSLGLM+SVLLSSDG
Sbjct: 308  ENSIWYEHRLIDDMVAYAVKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMSSVLLSSDG 367

Query: 485  KTLEAEAAHGTVTRHFRLDQKGQETSTNSIASIFAWTRGLEHRGKLDKHEQLLDFVSNLE 306
            KTLEAEAAHGTVTRHFRL QKGQETSTNSIASIFAWTRGLEHR KLDK+++LLDF   LE
Sbjct: 368  KTLEAEAAHGTVTRHFRLHQKGQETSTNSIASIFAWTRGLEHRAKLDKNDRLLDFTQKLE 427

Query: 305  TACVETVETGKMTKDLALLMHGSKVSRDLYLNTEEFIDAVAQNLETKLRVPSSL 144
            +ACVETVE+GKMTKDLALL HG KV+R+ YL+TEEFIDAVAQ L+ K+++P++L
Sbjct: 428  SACVETVESGKMTKDLALLSHGPKVTREFYLSTEEFIDAVAQQLQEKIKLPAAL 481


>ref|XP_003618179.1| Isocitrate dehydrogenase-like protein [Medicago truncatula]
            gi|355493194|gb|AES74397.1| Isocitrate dehydrogenase-like
            protein [Medicago truncatula]
          Length = 482

 Score =  749 bits (1935), Expect = 0.0
 Identities = 372/458 (81%), Positives = 406/458 (88%)
 Frame = -2

Query: 1517 SPSSLALKTSPFSINSNSHYLNTLSLKPHTNFFRNASLRCFASSSIDRIKVYNPIVEMDG 1338
            +P++L   ++P S     H  N+LS   H N      LRCFASS+   I V NPIVEMDG
Sbjct: 28   NPNNLLFHSTPSSSLFLPHPPNSLSFHNH-NHNPFIPLRCFASST--PIHVANPIVEMDG 84

Query: 1337 DEMARVMWKMIKDKLINPYLDLDIKYYDLGILNRDATDDKVTVESALATLKYNVAVKCAT 1158
            DEM R++WKMIKDKLI PYLDL+IKY+DLG+LNRDAT+D+VTVESA ATLKYNVAVKCAT
Sbjct: 85   DEMTRIIWKMIKDKLIFPYLDLNIKYFDLGVLNRDATEDRVTVESAEATLKYNVAVKCAT 144

Query: 1157 ITPDEGRVKEFGLKSMWRSPNGTIRNILNGTVFREPILCKNIPRIVSGWKKAICIGRHAF 978
            ITPDE RVKEFGLKSMWRSPNGTIRNILNGTVFREPI+C+NIPRI+ GWKK ICIGRHAF
Sbjct: 145  ITPDETRVKEFGLKSMWRSPNGTIRNILNGTVFREPIICRNIPRIIPGWKKPICIGRHAF 204

Query: 977  GDQYRATDAVISGPGKLKMVFVPAEGGTPVELDVHEFKGPGIALAMYNVDESIRAFAESS 798
            GDQYRATD VI+GPGKLK+VFVP +G TPVELDVH+FKGPG+ALAMYNVDESIRAFAESS
Sbjct: 205  GDQYRATDTVINGPGKLKLVFVPEDGDTPVELDVHDFKGPGVALAMYNVDESIRAFAESS 264

Query: 797  MAMALEKKWPLYLSTKNTILKKYDGRFKDIFQEAYEENWKQKFEENSIWYEHRLIDDMVA 618
            M++A  KKWPLYLSTKNTILKKYDGRFKDIFQE YEE W+QKFEE+SIWYEHRLIDDMVA
Sbjct: 265  MSLAFTKKWPLYLSTKNTILKKYDGRFKDIFQEVYEERWRQKFEEHSIWYEHRLIDDMVA 324

Query: 617  YALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLLSSDGKTLEAEAAHGTVTRHF 438
            YALKSEGGYVWACKNYDGDVQSD LAQGFGSLGLMTSVLLSSDGKTLEAEAAHGTVTRHF
Sbjct: 325  YALKSEGGYVWACKNYDGDVQSDLLAQGFGSLGLMTSVLLSSDGKTLEAEAAHGTVTRHF 384

Query: 437  RLDQKGQETSTNSIASIFAWTRGLEHRGKLDKHEQLLDFVSNLETACVETVETGKMTKDL 258
            R  QKGQETSTNSIASIFAWTRGLEHR KLDK+E+LLDF   LE ACVETVE+GKMTKDL
Sbjct: 385  RFHQKGQETSTNSIASIFAWTRGLEHRAKLDKNEKLLDFADKLEAACVETVESGKMTKDL 444

Query: 257  ALLMHGSKVSRDLYLNTEEFIDAVAQNLETKLRVPSSL 144
            ALL+HG KVSR+ YLNTEEFIDAVA NLE KLR P+++
Sbjct: 445  ALLIHGPKVSREFYLNTEEFIDAVASNLERKLREPATV 482


>ref|XP_002873679.1| hypothetical protein ARALYDRAFT_488300 [Arabidopsis lyrata subsp.
            lyrata] gi|297319516|gb|EFH49938.1| hypothetical protein
            ARALYDRAFT_488300 [Arabidopsis lyrata subsp. lyrata]
          Length = 492

 Score =  744 bits (1921), Expect = 0.0
 Identities = 362/426 (84%), Positives = 392/426 (92%), Gaps = 1/426 (0%)
 Frame = -2

Query: 1433 HTNFFRNASLRCFASSS-IDRIKVYNPIVEMDGDEMARVMWKMIKDKLINPYLDLDIKYY 1257
            H    R +++RCFASS   DRI+V NPIVEMDGDEM RV+W MIK+KLI PYLDLDIKY+
Sbjct: 62   HVQSHRASAVRCFASSGGSDRIQVQNPIVEMDGDEMTRVIWSMIKEKLILPYLDLDIKYF 121

Query: 1256 DLGILNRDATDDKVTVESALATLKYNVAVKCATITPDEGRVKEFGLKSMWRSPNGTIRNI 1077
            DLGILNRDATDDKVTVESA A LKYNVA+KCATITPDEGRVKEFGLKSMWRSPNGTIRNI
Sbjct: 122  DLGILNRDATDDKVTVESAEAALKYNVAIKCATITPDEGRVKEFGLKSMWRSPNGTIRNI 181

Query: 1076 LNGTVFREPILCKNIPRIVSGWKKAICIGRHAFGDQYRATDAVISGPGKLKMVFVPAEGG 897
            L+GTVFREPI+C NIPR+V GWKK ICIGRHAFGDQYRATD VI GPGKLKMVFVP +G 
Sbjct: 182  LDGTVFREPIMCSNIPRLVPGWKKPICIGRHAFGDQYRATDTVIKGPGKLKMVFVPEDGN 241

Query: 896  TPVELDVHEFKGPGIALAMYNVDESIRAFAESSMAMALEKKWPLYLSTKNTILKKYDGRF 717
             PVELDV++FKGPG+ALAMYNVDESIRAFAESSMAMAL KKWPLYLSTKNTILKKYDGRF
Sbjct: 242  APVELDVYDFKGPGVALAMYNVDESIRAFAESSMAMALTKKWPLYLSTKNTILKKYDGRF 301

Query: 716  KDIFQEAYEENWKQKFEENSIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQ 537
            KDIFQE YE NWKQKFEE+SIWYEHRLIDDMVAYA+KSEGGYVWACKNYDGDVQSD LAQ
Sbjct: 302  KDIFQEVYEANWKQKFEEHSIWYEHRLIDDMVAYAVKSEGGYVWACKNYDGDVQSDLLAQ 361

Query: 536  GFGSLGLMTSVLLSSDGKTLEAEAAHGTVTRHFRLDQKGQETSTNSIASIFAWTRGLEHR 357
            GFGSLGLMTS+LLS+DGKTLE+EAAHGTVTRHFRL QKGQETSTNSIASIFAWTRGLEHR
Sbjct: 362  GFGSLGLMTSILLSADGKTLESEAAHGTVTRHFRLHQKGQETSTNSIASIFAWTRGLEHR 421

Query: 356  GKLDKHEQLLDFVSNLETACVETVETGKMTKDLALLMHGSKVSRDLYLNTEEFIDAVAQN 177
             KLDK+E+L+DFV  LE++CV TVETGKMTKDLALL+HG KVSRDL+LNTEEFIDAVA  
Sbjct: 422  AKLDKNEKLMDFVKKLESSCVNTVETGKMTKDLALLIHGPKVSRDLFLNTEEFIDAVASK 481

Query: 176  LETKLR 159
            L+T+L+
Sbjct: 482  LKTQLK 487