BLASTX nr result

ID: Coptis25_contig00003677 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003677
         (1470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK37128.1| unknown [Medicago truncatula]                          326   8e-87
ref|XP_003610353.1| hypothetical protein MTR_4g131190 [Medicago ...   323   5e-86
ref|XP_002523496.1| conserved hypothetical protein [Ricinus comm...   322   1e-85
ref|XP_002324550.1| predicted protein [Populus trichocarpa] gi|2...   322   2e-85
ref|XP_004146693.1| PREDICTED: UPF0549 protein C20orf43 homolog ...   320   5e-85

>gb|AFK37128.1| unknown [Medicago truncatula]
          Length = 361

 Score =  326 bits (836), Expect = 8e-87
 Identities = 197/358 (55%), Positives = 220/358 (61%), Gaps = 45/358 (12%)
 Frame = -2

Query: 1421 QIFIQSPDLKIPTLPLTITQNSXXXXXXXXXXXXXXPSLYFTLNGKPLSDFSH----PIP 1254
            QI +QSPDL+I   P ++T +                S YFTLNGKPLSD ++     I 
Sbjct: 7    QILVQSPDLQIH--PKSVTGDETLSDLKHSIFPNSQSSFYFTLNGKPLSDDTNFSTSRIA 64

Query: 1253 NFSTLILHIKTLXXXXXXGSTCAESRDCYLNMYAVKKPDKVDPNEARLSRWTNCALSFEP 1074
              STL+L  +        GSTCAESRDCYL MYA KKPDKVDPNE RLS+W NCALS EP
Sbjct: 65   PLSTLVLQSRLRGGGGDGGSTCAESRDCYLKMYAEKKPDKVDPNEQRLSKWQNCALSNEP 124

Query: 1073 LKPPCVLDKLGNLFNKEVLVHALLSKKLPKEFGYIKGLKDMITLSLD----ESGSGFFQC 906
            L+ PCV+DKLGN+FNKE L  ALL KKLPKEFGYIKGLKDMI + L+    E     F+C
Sbjct: 125  LREPCVIDKLGNIFNKESLAEALLGKKLPKEFGYIKGLKDMIKIKLESVPGEDDGAKFRC 184

Query: 905  PVSGLEFNGKCKFYVLRTCGHVLSGKALKEVKSSGCLVCRKEFTEEDKIVINGNVEEVAV 726
            PV+G EFNGK KF+ LR CGHVLS KALKEVKSS CLVC +EF E DKIVINGN EEV V
Sbjct: 185  PVAGREFNGKYKFFALRNCGHVLSAKALKEVKSSACLVCHEEFGEGDKIVINGNEEEVEV 244

Query: 725  LRXXXXXXXXXXXXXXXKR------HCVDGESL-----------VEVKKGSVKKLKTG-- 603
            LR               K+        VDG SL           + V+K S K  K G  
Sbjct: 245  LRERMEEEKAKVREKKTKKVKNNDSEAVDGLSLEASKLTGTKHGLNVEKASAKVDKNGKV 304

Query: 602  --------GGL----------VAPVNATKEVYASIFTSSRKSEFKETYSCRSLPLGRN 483
                    GG           +AP NAT EVYASIFTSSRKSEFKETYSCRSLPLGRN
Sbjct: 305  ANGNKGVNGGAAAAKRFKATDIAPANAT-EVYASIFTSSRKSEFKETYSCRSLPLGRN 361


>ref|XP_003610353.1| hypothetical protein MTR_4g131190 [Medicago truncatula]
            gi|355511408|gb|AES92550.1| hypothetical protein
            MTR_4g131190 [Medicago truncatula]
          Length = 459

 Score =  323 bits (829), Expect = 5e-86
 Identities = 196/355 (55%), Positives = 219/355 (61%), Gaps = 45/355 (12%)
 Frame = -2

Query: 1421 QIFIQSPDLKIPTLPLTITQNSXXXXXXXXXXXXXXPSLYFTLNGKPLSDFSH----PIP 1254
            QI +QSPDL+I   P ++T +                S YFTLNGKPLSD ++     I 
Sbjct: 7    QILVQSPDLQIH--PKSVTGDETLSDLKHSIFPNSQSSFYFTLNGKPLSDDTNFSTSRIA 64

Query: 1253 NFSTLILHIKTLXXXXXXGSTCAESRDCYLNMYAVKKPDKVDPNEARLSRWTNCALSFEP 1074
              STL+L  +        GSTCAESRDCYL MYA KKPDKVDPNE RLS+W NCALS EP
Sbjct: 65   PLSTLVLQSRLRGGGGDGGSTCAESRDCYLKMYAEKKPDKVDPNEQRLSKWQNCALSNEP 124

Query: 1073 LKPPCVLDKLGNLFNKEVLVHALLSKKLPKEFGYIKGLKDMITLSLD----ESGSGFFQC 906
            L+ PCV+DKLGN+FNKE LV ALL KKLPKEFGYIKGLKDMI + L+    E     F+C
Sbjct: 125  LREPCVIDKLGNIFNKESLVEALLGKKLPKEFGYIKGLKDMIKIKLESVPGEDDGAKFRC 184

Query: 905  PVSGLEFNGKCKFYVLRTCGHVLSGKALKEVKSSGCLVCRKEFTEEDKIVINGNVEEVAV 726
            PV+GLEFNGK KF+ LR CGHVLS KALKEVKSS CLVC +EF E DKIVINGN EEV V
Sbjct: 185  PVAGLEFNGKYKFFALRNCGHVLSAKALKEVKSSACLVCHEEFGEGDKIVINGNEEEVEV 244

Query: 725  LRXXXXXXXXXXXXXXXKR------HCVDGESL-----------VEVKKGSVKKLKTG-- 603
            LR               K+        VDG SL           + V+K S K  K G  
Sbjct: 245  LRERMEEEKAKVREKKTKKVKNNDSEAVDGLSLEASKLTGTKHGLNVEKASAKVDKNGKV 304

Query: 602  --------GGL----------VAPVNATKEVYASIFTSSRKSEFKETYSCRSLPL 492
                    GG           +AP NAT EVYASIFTSSRKSEFKETYSCRSLPL
Sbjct: 305  ANGNKGVNGGAAAAKRFKATDIAPANAT-EVYASIFTSSRKSEFKETYSCRSLPL 358


>ref|XP_002523496.1| conserved hypothetical protein [Ricinus communis]
            gi|223537203|gb|EEF38835.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 375

 Score =  322 bits (826), Expect = 1e-85
 Identities = 199/372 (53%), Positives = 221/372 (59%), Gaps = 59/372 (15%)
 Frame = -2

Query: 1421 QIFIQSPDLKIPTLPLTITQNSXXXXXXXXXXXXXXPSL---YFTLNGKPLSDFSHPIPN 1251
            QIF+Q P+ K+ TL L  TQ                 +L   +FTLNGKPL D S PIPN
Sbjct: 7    QIFLQLPNSKLQTLTLDSTQILTLHDLKLSLFPNNHQNLSSFFFTLNGKPLLD-STPIPN 65

Query: 1250 -----FSTLILHIKTLXXXXXXGSTCAESRDCYLNMYAVKKPDKVDPNEARLSRWTNCAL 1086
                  STL+LH +        G+T AESRDCYLNMYA KKPDKVDPNE RLS+W NCAL
Sbjct: 66   PQITSLSTLVLHSRLPGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQRLSKWLNCAL 125

Query: 1085 SFEPLKPPCVLDKLGNLFNKEVLVHALLSKKLPKEFGYIKGLKDMITLSL-------DES 927
            S EPL  PCV+DKLGN+FNKE LV AL+ KKLPKEFGYIKGLKDMI + L       +E 
Sbjct: 126  SNEPLMQPCVIDKLGNVFNKEALVEALIGKKLPKEFGYIKGLKDMINIKLEPIPGEKEEL 185

Query: 926  GSGFFQCPVSGLEFNGKCKFYVLRTCGHVLSGKALKEVKSSGCLVCRKEFTEEDKIVING 747
             S  F CP+SGLEFNGK KFY L+ CGHVLS KALKEVKSS CLVC KEF E DKIVING
Sbjct: 186  YSAKFHCPISGLEFNGKYKFYALKNCGHVLSAKALKEVKSSACLVCYKEFEEFDKIVING 245

Query: 746  NVEEVAVLRXXXXXXXXXXXXXXXKR------------HCVD------------------ 657
            + EEVA LR               K+             CVD                  
Sbjct: 246  SDEEVADLRERLEEERLKVHDKKSKKVKKGEVGVNGGDDCVDLDTSRLIGKKHGISDDKG 305

Query: 656  ---------GESLVEVKK-----GSVKKLKTGGGLVAPVNATKEVYASIFTSSRKSEFKE 519
                     G   VE  K     G+VKK K     +AP NATKEVYASIFTSS+KS+FKE
Sbjct: 306  VEKVVSKVVGSGKVEKVKGVGNGGAVKKFKAAD--MAPANATKEVYASIFTSSKKSDFKE 363

Query: 518  TYSCRSLPLGRN 483
            TY CRSLPLGRN
Sbjct: 364  TYMCRSLPLGRN 375


>ref|XP_002324550.1| predicted protein [Populus trichocarpa] gi|222865984|gb|EEF03115.1|
            predicted protein [Populus trichocarpa]
          Length = 346

 Score =  322 bits (825), Expect = 2e-85
 Identities = 192/342 (56%), Positives = 218/342 (63%), Gaps = 29/342 (8%)
 Frame = -2

Query: 1421 QIFIQS--PDLKIPTLPLTITQNSXXXXXXXXXXXXXXP--SLYFTLNGKPLSDFSHPIP 1254
            QIFIQS  P  K  TL L  TQ                   S YFTLNGKPL D S  +P
Sbjct: 7    QIFIQSQNPQFKTQTLTLDPTQTLTLYNLKLSLITDNQNPSSFYFTLNGKPLKD-STCLP 65

Query: 1253 N-----FSTLILHIKTLXXXXXXGSTCAESRDCYLNMYAVKKPDKVDPNEARLSRWTNCA 1089
            N       TLIL ++        G+T AESRDCYLNMYA KKPDKVDP+E RLS+W NC+
Sbjct: 66   NPQITPLCTLILQVRLSGGGGDGGATGAESRDCYLNMYADKKPDKVDPHELRLSKWLNCS 125

Query: 1088 LSFEPLKPPCVLDKLGNLFNKEVLVHALLSKKLPKEFGYIKGLKDMITLSL-----DESG 924
            LS EPL+ PCV+D+LGN+FNKE LV AL+ KKLPKEFGYIKGLKDMI + L     D SG
Sbjct: 126  LSNEPLRQPCVIDRLGNMFNKEALVEALIGKKLPKEFGYIKGLKDMIDIQLEVVPGDGSG 185

Query: 923  SGFFQCPVSGLEFNGKCKFYVLRTCGHVLSGKALKEVKSSGCLVCRKEFTEEDKIVINGN 744
            +  FQCPV+GLEFNGK KF+ L+ CGHVLS KALKEVKSS CLVC KEF E DKIVING 
Sbjct: 186  NARFQCPVTGLEFNGKYKFFALKNCGHVLSAKALKEVKSSECLVCYKEFEECDKIVINGG 245

Query: 743  VEEVAVLRXXXXXXXXXXXXXXXKRHCVDGESLVEV--------KKGSVKKLKTGGGL-- 594
             EEVAVLR                +   +GE + +V        K  +VK +  GG +  
Sbjct: 246  DEEVAVLR-ERMEEERSKMKEKKMKKVKNGEGVDKVVGKVKGNGKVENVKGVSHGGSVKR 304

Query: 593  -----VAPVNATKEVYASIFTSSRKSEFKETYSCRSLPLGRN 483
                 + P NATKEVYASIFTSS+K  FKETYSCRSLPLGRN
Sbjct: 305  FKATDMVPTNATKEVYASIFTSSKKQSFKETYSCRSLPLGRN 346


>ref|XP_004146693.1| PREDICTED: UPF0549 protein C20orf43 homolog [Cucumis sativus]
            gi|449517820|ref|XP_004165942.1| PREDICTED: UPF0549
            protein C20orf43 homolog [Cucumis sativus]
          Length = 349

 Score =  320 bits (821), Expect = 5e-85
 Identities = 188/342 (54%), Positives = 215/342 (62%), Gaps = 29/342 (8%)
 Frame = -2

Query: 1421 QIFIQSPDLKI-------PTLPLTITQNSXXXXXXXXXXXXXXPSLYFTLNGKPLSDFS- 1266
            QIF+QSPDL+I       P  P    ++                S YFTLNGKPL D + 
Sbjct: 10   QIFLQSPDLQIESKIVNLPQTPAKTLEDLKFSLLTEILASRIASSFYFTLNGKPLLDSTT 69

Query: 1265 -HPIPNFSTLILHIKTLXXXXXXGSTCAESRDCYLNMYAVKKPDKVDPNEARLSRWTNCA 1089
               IP  STLIL  + L      G+T AESRDCYLNMYA KKPDKVDPNE RLS+W NCA
Sbjct: 70   ISLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQRLSKWLNCA 129

Query: 1088 LSFEPLKPPCVLDKLGNLFNKEVLVHALLSKKLPKEFGYIKGLKDMITLSL------DES 927
            LS EPL+ PCV+D LGN+FNKE LV ALL KKLPK FG+IKGLKDMI ++       +  
Sbjct: 130  LSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKINFSMIPGTESR 189

Query: 926  GSGF----FQCPVSGLEFNGKCKFYVLRTCGHVLSGKALKEVKSSGCLVCRKEFTEEDKI 759
            G+      +QCPV+GLEFNGK KF+ LRTCGHVLS KALKEVKSS CLVC  EF E DK 
Sbjct: 190  GNAISEPRYQCPVTGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCHAEFAERDKF 249

Query: 758  VINGNVEEVAVLRXXXXXXXXXXXXXXXKRHCV--------DGESLVE--VKKGSVKKLK 609
            VING+ EEV  +R               K   V        DG + V+     G+VK+ K
Sbjct: 250  VINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVERLDGGAQVKDATSNGAVKRFK 309

Query: 608  TGGGLVAPVNATKEVYASIFTSSRKSEFKETYSCRSLPLGRN 483
                 + P NATKEVYASIFTSSRKS+FKETYSCRSLPLGRN
Sbjct: 310  AAD--MVPANATKEVYASIFTSSRKSDFKETYSCRSLPLGRN 349


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