BLASTX nr result

ID: Coptis25_contig00003671 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003671
         (240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265408.2| PREDICTED: syntaxin-112 [Vitis vinifera]           95   7e-18
emb|CBI17497.3| unnamed protein product [Vitis vinifera]               95   7e-18
ref|XP_002521564.1| syntaxin, putative [Ricinus communis] gi|223...    92   4e-17
ref|XP_002327686.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
ref|XP_003629152.1| Phosphopantetheine adenylyltransferase [Medi...    90   2e-16

>ref|XP_002265408.2| PREDICTED: syntaxin-112 [Vitis vinifera]
          Length = 493

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 49/70 (70%), Positives = 56/70 (80%), Gaps = 5/70 (7%)
 Frame = +3

Query: 45  MASSKEPLGDSNC-----YRSVVLGGTFDRLHEGHRAFLKASALLAKQRIVIGVCDGPML 209
           +++SK+   DSN      Y +VVLGGTFDRLH+GHR FLKASA LA+ RIVIGVCDGPML
Sbjct: 3   VSNSKDSFADSNLSPPNSYGAVVLGGTFDRLHDGHRFFLKASAELARDRIVIGVCDGPML 62

Query: 210 SKKQFADLIE 239
           SKKQFA LIE
Sbjct: 63  SKKQFAGLIE 72


>emb|CBI17497.3| unnamed protein product [Vitis vinifera]
          Length = 174

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 49/70 (70%), Positives = 56/70 (80%), Gaps = 5/70 (7%)
 Frame = +3

Query: 45  MASSKEPLGDSNC-----YRSVVLGGTFDRLHEGHRAFLKASALLAKQRIVIGVCDGPML 209
           +++SK+   DSN      Y +VVLGGTFDRLH+GHR FLKASA LA+ RIVIGVCDGPML
Sbjct: 3   VSNSKDSFADSNLSPPNSYGAVVLGGTFDRLHDGHRFFLKASAELARDRIVIGVCDGPML 62

Query: 210 SKKQFADLIE 239
           SKKQFA LIE
Sbjct: 63  SKKQFAGLIE 72


>ref|XP_002521564.1| syntaxin, putative [Ricinus communis] gi|223539242|gb|EEF40835.1|
           syntaxin, putative [Ricinus communis]
          Length = 493

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 46/70 (65%), Positives = 55/70 (78%), Gaps = 5/70 (7%)
 Frame = +3

Query: 45  MASSKEPL-----GDSNCYRSVVLGGTFDRLHEGHRAFLKASALLAKQRIVIGVCDGPML 209
           MA  +EP+        N Y +VVLGGTFDRLH+GHR FLKASA LA++RIV+GVCDGPML
Sbjct: 1   MAVLEEPMVNHKISPPNSYGAVVLGGTFDRLHDGHRLFLKASAELARERIVVGVCDGPML 60

Query: 210 SKKQFADLIE 239
           + KQFADLI+
Sbjct: 61  TNKQFADLIQ 70


>ref|XP_002327686.1| predicted protein [Populus trichocarpa] gi|222836771|gb|EEE75164.1|
           predicted protein [Populus trichocarpa]
          Length = 178

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 43/58 (74%), Positives = 48/58 (82%)
 Frame = +3

Query: 66  LGDSNCYRSVVLGGTFDRLHEGHRAFLKASALLAKQRIVIGVCDGPMLSKKQFADLIE 239
           L   N Y +VVLGGTFDRLH+GHR FLKA+A LAK RIVIGVCDGPML  KQFA+LI+
Sbjct: 13  LSPPNSYSAVVLGGTFDRLHDGHRLFLKAAAELAKDRIVIGVCDGPMLKNKQFAELIQ 70


>ref|XP_003629152.1| Phosphopantetheine adenylyltransferase [Medicago truncatula]
           gi|355523174|gb|AET03628.1| Phosphopantetheine
           adenylyltransferase [Medicago truncatula]
          Length = 170

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 43/58 (74%), Positives = 48/58 (82%)
 Frame = +3

Query: 66  LGDSNCYRSVVLGGTFDRLHEGHRAFLKASALLAKQRIVIGVCDGPMLSKKQFADLIE 239
           L   N Y +VV GGTFDRLH+GHR FL ASA LAK RIVIGVCDGPML+KKQF++LIE
Sbjct: 14  LSPPNTYEAVVNGGTFDRLHDGHRLFLTASATLAKHRIVIGVCDGPMLAKKQFSELIE 71


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