BLASTX nr result
ID: Coptis25_contig00003670
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00003670 (932 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002318020.1| predicted protein [Populus trichocarpa] gi|1... 164 4e-38 ref|XP_002321566.1| predicted protein [Populus trichocarpa] gi|2... 160 4e-37 emb|CBI15083.3| unnamed protein product [Vitis vinifera] 160 5e-37 ref|XP_003634253.1| PREDICTED: snakin-2-like [Vitis vinifera] 155 1e-35 ref|XP_003549639.1| PREDICTED: snakin-2-like [Glycine max] 149 7e-34 >ref|XP_002318020.1| predicted protein [Populus trichocarpa] gi|118482787|gb|ABK93311.1| unknown [Populus trichocarpa] gi|118485213|gb|ABK94467.1| unknown [Populus trichocarpa] gi|118487438|gb|ABK95547.1| unknown [Populus trichocarpa] gi|222858693|gb|EEE96240.1| predicted protein [Populus trichocarpa] Length = 109 Score = 164 bits (414), Expect = 4e-38 Identities = 73/110 (66%), Positives = 89/110 (80%), Gaps = 3/110 (2%) Frame = +1 Query: 406 MALRVLILLAVLFFCFADVST---VEGEMAGDVSQVVVKAANKRLMQTVDCGGQCDKRCS 576 MA+R L+ + VL FC A+VS+ ++ E+ V Q+VV+ N+RLMQ +DCGG C +RCS Sbjct: 1 MAVRSLLAMMVLLFCLAEVSSDLKIDTEIP-QVFQLVVRGGNRRLMQDIDCGGLCKQRCS 59 Query: 577 VHSRPNLCKRACGTCCVRCKCVPPGTSGNREMCGSCYMDMKTHGNKTKCP 726 +HSRPNLC RACGTCCVRCKCVPPGTSGNRE+CG+CY DM THGNKTKCP Sbjct: 60 LHSRPNLCNRACGTCCVRCKCVPPGTSGNREVCGTCYTDMTTHGNKTKCP 109 >ref|XP_002321566.1| predicted protein [Populus trichocarpa] gi|222868562|gb|EEF05693.1| predicted protein [Populus trichocarpa] Length = 109 Score = 160 bits (405), Expect = 4e-37 Identities = 72/109 (66%), Positives = 85/109 (77%), Gaps = 2/109 (1%) Frame = +1 Query: 406 MALRVLILLAVLFFCFADVSTVEGEMAG--DVSQVVVKAANKRLMQTVDCGGQCDKRCSV 579 MA+R L+ L V FC A+VS+ G V Q+VV+ N+RLMQ +DCGG C +RCS+ Sbjct: 1 MAVRSLLALMVFVFCLAEVSSDLKIDTGILHVGQLVVRGGNRRLMQDIDCGGLCKQRCSL 60 Query: 580 HSRPNLCKRACGTCCVRCKCVPPGTSGNREMCGSCYMDMKTHGNKTKCP 726 HSRPN+C RACGTCCVRCKCVPPGTSGNRE+CG+CY DM THGNKTKCP Sbjct: 61 HSRPNVCTRACGTCCVRCKCVPPGTSGNREVCGTCYTDMTTHGNKTKCP 109 >emb|CBI15083.3| unnamed protein product [Vitis vinifera] Length = 111 Score = 160 bits (404), Expect = 5e-37 Identities = 71/108 (65%), Positives = 83/108 (76%), Gaps = 3/108 (2%) Frame = +1 Query: 412 LRVLILLAVLFFCFADVST---VEGEMAGDVSQVVVKAANKRLMQTVDCGGQCDKRCSVH 582 LR+L++ L A +S+ +EGE VSQVVV+ N+RLMQ +DCGG C RCS+H Sbjct: 4 LRLLLVFVALLVFLAQISSDFNIEGEEMPFVSQVVVRGGNRRLMQDIDCGGLCKDRCSLH 63 Query: 583 SRPNLCKRACGTCCVRCKCVPPGTSGNREMCGSCYMDMKTHGNKTKCP 726 SRPN+C RACGTCCVRCKCVPPGTSGNRE+CG CY DM THGNKTKCP Sbjct: 64 SRPNVCVRACGTCCVRCKCVPPGTSGNRELCGKCYTDMTTHGNKTKCP 111 >ref|XP_003634253.1| PREDICTED: snakin-2-like [Vitis vinifera] Length = 112 Score = 155 bits (392), Expect = 1e-35 Identities = 71/109 (65%), Positives = 83/109 (76%), Gaps = 4/109 (3%) Frame = +1 Query: 412 LRVLILLAVLFFCFADVST---VEGEMAGDVSQ-VVVKAANKRLMQTVDCGGQCDKRCSV 579 LR+L++ L A +S+ +EGE VSQ VVV+ N+RLMQ +DCGG C RCS+ Sbjct: 4 LRLLLVFVALLVFLAQISSDFNIEGEEMPFVSQAVVVRGGNRRLMQDIDCGGLCKDRCSL 63 Query: 580 HSRPNLCKRACGTCCVRCKCVPPGTSGNREMCGSCYMDMKTHGNKTKCP 726 HSRPN+C RACGTCCVRCKCVPPGTSGNRE+CG CY DM THGNKTKCP Sbjct: 64 HSRPNVCVRACGTCCVRCKCVPPGTSGNRELCGKCYTDMTTHGNKTKCP 112 >ref|XP_003549639.1| PREDICTED: snakin-2-like [Glycine max] Length = 115 Score = 149 bits (377), Expect = 7e-34 Identities = 68/115 (59%), Positives = 83/115 (72%), Gaps = 8/115 (6%) Frame = +1 Query: 406 MALRVLILLAVLFF-CFADVST-------VEGEMAGDVSQVVVKAANKRLMQTVDCGGQC 561 MALR L+++ +L C A VS+ + E+ ++V+ N+RLMQ +DCGG C Sbjct: 1 MALRELLMMGILLLVCLAKVSSDVNMQKEEDEELRFPNHPLIVRDGNRRLMQDIDCGGLC 60 Query: 562 DKRCSVHSRPNLCKRACGTCCVRCKCVPPGTSGNREMCGSCYMDMKTHGNKTKCP 726 RCS HSRPN+C RACGTCCVRCKCVPPGTSGNRE+CG+CY DM THGNKTKCP Sbjct: 61 KTRCSAHSRPNVCNRACGTCCVRCKCVPPGTSGNRELCGTCYTDMITHGNKTKCP 115