BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003667
         (1068 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145505.1| PREDICTED: transcription initiation factor T...   102   2e-19
ref|XP_002324907.1| predicted protein [Populus trichocarpa] gi|2...   100   5e-19
ref|XP_002515435.1| protein with unknown function [Ricinus commu...   100   8e-19
ref|XP_003526182.1| PREDICTED: transcription initiation factor T...    99   2e-18
ref|XP_003563321.1| PREDICTED: transcription initiation factor T...    98   4e-18

>ref|XP_004145505.1| PREDICTED: transcription initiation factor TFIID subunit 5-like
           [Cucumis sativus] gi|449485181|ref|XP_004157092.1|
           PREDICTED: transcription initiation factor TFIID subunit
           5-like [Cucumis sativus]
          Length = 674

 Score =  102 bits (253), Expect = 2e-19
 Identities = 52/66 (78%), Positives = 57/66 (86%), Gaps = 1/66 (1%)
 Frame = +2

Query: 140 LASGSADCTVKLWDVTASTKAPKLDE-KVGCTNRLRSLKTLPTKCSPVYTEQFSRRNLLF 316
           LASGSADCTVKLWDVT+STK P+ DE K G  NRLRSLKTLPTK +PVY+ +FSRRNLLF
Sbjct: 603 LASGSADCTVKLWDVTSSTKPPRTDENKTGTPNRLRSLKTLPTKSTPVYSLRFSRRNLLF 662

Query: 317 AAGVLS 334
           AAG LS
Sbjct: 663 AAGALS 668


>ref|XP_002324907.1| predicted protein [Populus trichocarpa] gi|222866341|gb|EEF03472.1|
           predicted protein [Populus trichocarpa]
          Length = 675

 Score =  100 bits (250), Expect = 5e-19
 Identities = 52/66 (78%), Positives = 57/66 (86%), Gaps = 1/66 (1%)
 Frame = +2

Query: 140 LASGSADCTVKLWDVTASTKAPKLDE-KVGCTNRLRSLKTLPTKCSPVYTEQFSRRNLLF 316
           LASGSADCTVKLWDVT STKAP+ +E K G TNRLR LKTLPTK +PVYT +FSRRNLLF
Sbjct: 607 LASGSADCTVKLWDVTTSTKAPRTEESKSGNTNRLRLLKTLPTKSTPVYTLRFSRRNLLF 666

Query: 317 AAGVLS 334
           AAG L+
Sbjct: 667 AAGALA 672


>ref|XP_002515435.1| protein with unknown function [Ricinus communis]
           gi|223545379|gb|EEF46884.1| protein with unknown
           function [Ricinus communis]
          Length = 670

 Score =  100 bits (248), Expect = 8e-19
 Identities = 52/66 (78%), Positives = 57/66 (86%), Gaps = 1/66 (1%)
 Frame = +2

Query: 140 LASGSADCTVKLWDVTASTKAPKLDE-KVGCTNRLRSLKTLPTKCSPVYTEQFSRRNLLF 316
           LASGSADCTVKLWDVT+STK  K +E K G  NRLRSLKTLPTK +PVY+ +FSRRNLLF
Sbjct: 602 LASGSADCTVKLWDVTSSTKVTKAEESKSGSANRLRSLKTLPTKSTPVYSLRFSRRNLLF 661

Query: 317 AAGVLS 334
           AAGVLS
Sbjct: 662 AAGVLS 667


>ref|XP_003526182.1| PREDICTED: transcription initiation factor TFIID subunit 5-like
           [Glycine max]
          Length = 663

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 48/65 (73%), Positives = 54/65 (83%)
 Frame = +2

Query: 140 LASGSADCTVKLWDVTASTKAPKLDEKVGCTNRLRSLKTLPTKCSPVYTEQFSRRNLLFA 319
           +ASGSADCTVKLWDV  STK  + +EK G  NRLRSLKTLPTK +PVY+ +FSRRNLLFA
Sbjct: 596 IASGSADCTVKLWDVNTSTKVSRAEEKGGSANRLRSLKTLPTKSTPVYSLRFSRRNLLFA 655

Query: 320 AGVLS 334
           AG LS
Sbjct: 656 AGALS 660


>ref|XP_003563321.1| PREDICTED: transcription initiation factor TFIID subunit 5-like
           [Brachypodium distachyon]
          Length = 682

 Score = 97.8 bits (242), Expect = 4e-18
 Identities = 52/66 (78%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
 Frame = +2

Query: 140 LASGSADCTVKLWDVTASTKAPKLDE-KVGCTNRLRSLKTLPTKCSPVYTEQFSRRNLLF 316
           LASGSADCTVKLWDV +STKA KLD+ K G TNRLR LK LPTK SPVY  +FSRRNLLF
Sbjct: 614 LASGSADCTVKLWDVASSTKALKLDDTKGGSTNRLRLLKALPTKSSPVYNLRFSRRNLLF 673

Query: 317 AAGVLS 334
           AAG LS
Sbjct: 674 AAGALS 679