BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003666
         (781 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145505.1| PREDICTED: transcription initiation factor T...    92   1e-16
ref|XP_002324907.1| predicted protein [Populus trichocarpa] gi|2...    92   1e-16
ref|XP_002515435.1| protein with unknown function [Ricinus commu...    90   5e-16
ref|XP_003526182.1| PREDICTED: transcription initiation factor T...    89   8e-16
ref|XP_003563321.1| PREDICTED: transcription initiation factor T...    87   4e-15

>ref|XP_004145505.1| PREDICTED: transcription initiation factor TFIID subunit 5-like
           [Cucumis sativus] gi|449485181|ref|XP_004157092.1|
           PREDICTED: transcription initiation factor TFIID subunit
           5-like [Cucumis sativus]
          Length = 674

 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 45/59 (76%), Positives = 51/59 (86%), Gaps = 1/59 (1%)
 Frame = +1

Query: 316 DCTVKLWDVTASTKAPKMDE-KVGCTNRLRSLKTLPTKCSPVYTVQFSRRNLLFAAGVL 489
           DCTVKLWDVT+STK P+ DE K G  NRLRSLKTLPTK +PVY+++FSRRNLLFAAG L
Sbjct: 609 DCTVKLWDVTSSTKPPRTDENKTGTPNRLRSLKTLPTKSTPVYSLRFSRRNLLFAAGAL 667


>ref|XP_002324907.1| predicted protein [Populus trichocarpa] gi|222866341|gb|EEF03472.1|
           predicted protein [Populus trichocarpa]
          Length = 675

 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 46/59 (77%), Positives = 51/59 (86%), Gaps = 1/59 (1%)
 Frame = +1

Query: 316 DCTVKLWDVTASTKAPKMDE-KVGCTNRLRSLKTLPTKCSPVYTVQFSRRNLLFAAGVL 489
           DCTVKLWDVT STKAP+ +E K G TNRLR LKTLPTK +PVYT++FSRRNLLFAAG L
Sbjct: 613 DCTVKLWDVTTSTKAPRTEESKSGNTNRLRLLKTLPTKSTPVYTLRFSRRNLLFAAGAL 671


>ref|XP_002515435.1| protein with unknown function [Ricinus communis]
           gi|223545379|gb|EEF46884.1| protein with unknown
           function [Ricinus communis]
          Length = 670

 Score = 90.1 bits (222), Expect = 5e-16
 Identities = 45/59 (76%), Positives = 51/59 (86%), Gaps = 1/59 (1%)
 Frame = +1

Query: 316 DCTVKLWDVTASTKAPKMDE-KVGCTNRLRSLKTLPTKCSPVYTVQFSRRNLLFAAGVL 489
           DCTVKLWDVT+STK  K +E K G  NRLRSLKTLPTK +PVY+++FSRRNLLFAAGVL
Sbjct: 608 DCTVKLWDVTSSTKVTKAEESKSGSANRLRSLKTLPTKSTPVYSLRFSRRNLLFAAGVL 666


>ref|XP_003526182.1| PREDICTED: transcription initiation factor TFIID subunit 5-like
           [Glycine max]
          Length = 663

 Score = 89.4 bits (220), Expect = 8e-16
 Identities = 42/58 (72%), Positives = 48/58 (82%)
 Frame = +1

Query: 316 DCTVKLWDVTASTKAPKMDEKVGCTNRLRSLKTLPTKCSPVYTVQFSRRNLLFAAGVL 489
           DCTVKLWDV  STK  + +EK G  NRLRSLKTLPTK +PVY+++FSRRNLLFAAG L
Sbjct: 602 DCTVKLWDVNTSTKVSRAEEKGGSANRLRSLKTLPTKSTPVYSLRFSRRNLLFAAGAL 659


>ref|XP_003563321.1| PREDICTED: transcription initiation factor TFIID subunit 5-like
           [Brachypodium distachyon]
          Length = 682

 Score = 87.0 bits (214), Expect = 4e-15
 Identities = 44/59 (74%), Positives = 49/59 (83%), Gaps = 1/59 (1%)
 Frame = +1

Query: 316 DCTVKLWDVTASTKAPKMDE-KVGCTNRLRSLKTLPTKCSPVYTVQFSRRNLLFAAGVL 489
           DCTVKLWDV +STKA K+D+ K G TNRLR LK LPTK SPVY ++FSRRNLLFAAG L
Sbjct: 620 DCTVKLWDVASSTKALKLDDTKGGSTNRLRLLKALPTKSSPVYNLRFSRRNLLFAAGAL 678