BLASTX nr result

ID: Coptis25_contig00003665 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003665
         (1216 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520863.1| Alpha-expansin 8 precursor, putative [Ricinu...   414   e-113
gb|AAC33529.1| expansin [Prunus armeniaca]                            412   e-112
gb|AAG13982.1|AF297521_1 expansin 1 [Prunus avium] gi|13898651|g...   410   e-112
gb|AAR09169.1| alpha-expansin 2 [Populus tremula x Populus tremu...   409   e-112
dbj|BAC67190.1| expansin [Pyrus communis]                             407   e-111

>ref|XP_002520863.1| Alpha-expansin 8 precursor, putative [Ricinus communis]
            gi|223539994|gb|EEF41572.1| Alpha-expansin 8 precursor,
            putative [Ricinus communis]
          Length = 252

 Score =  414 bits (1063), Expect = e-113
 Identities = 191/227 (84%), Positives = 204/227 (89%)
 Frame = -2

Query: 1071 LLFTLFNIFLHGAYGDYGGWEGAHATFYXXXXXXXXXXXXXGYGNLYSQGYGTDTAALST 892
            LLF L N+ L G YGDYGGW+ AHATFY             GYGNLYSQGYGT+TAALST
Sbjct: 11   LLFFLLNLCLRGTYGDYGGWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALST 70

Query: 891  ALFNNGLSCGSCYQMRCNDDPRWCLPGTITVTATNFCPPNPAQPNDNGGWCNPPLQHFDL 712
            ALFN+GLSCGSCY+MRC++DP+WCLPGTITVTATNFCPPN AQ NDNGGWCNPPLQHFDL
Sbjct: 71   ALFNSGLSCGSCYEMRCDNDPKWCLPGTITVTATNFCPPNFAQSNDNGGWCNPPLQHFDL 130

Query: 711  AEPAFLQIAQYRAGIVPVSFRRVPCVKKGGIRFTVNGHSYFNLVLITNVAGAGDVHAVSI 532
            AEPAFLQIAQYRAGIVPVSFRR+PC KKGGIRFT+NGHSYFNLVLITNVAGAGDVH+VSI
Sbjct: 131  AEPAFLQIAQYRAGIVPVSFRRIPCAKKGGIRFTINGHSYFNLVLITNVAGAGDVHSVSI 190

Query: 531  KGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTTSDGRTITSYNVA 391
            KGSKTGWQ MSRNWGQNWQSNSY+NGQSLSFQVTTSDGRT+TSYNVA
Sbjct: 191  KGSKTGWQTMSRNWGQNWQSNSYMNGQSLSFQVTTSDGRTVTSYNVA 237


>gb|AAC33529.1| expansin [Prunus armeniaca]
          Length = 254

 Score =  412 bits (1058), Expect = e-112
 Identities = 190/227 (83%), Positives = 203/227 (89%)
 Frame = -2

Query: 1071 LLFTLFNIFLHGAYGDYGGWEGAHATFYXXXXXXXXXXXXXGYGNLYSQGYGTDTAALST 892
            L   LFN+ LHGA+ DYGGWEGAHATFY             GYGNLYSQGYGT+TAALST
Sbjct: 13   LSLVLFNLHLHGAFADYGGWEGAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALST 72

Query: 891  ALFNNGLSCGSCYQMRCNDDPRWCLPGTITVTATNFCPPNPAQPNDNGGWCNPPLQHFDL 712
            ALFNNGLSCGSCY+MRCN+DPRWC PG+I VTATNFCPPN AQ NDNGGWCNPPLQHFDL
Sbjct: 73   ALFNNGLSCGSCYEMRCNNDPRWCRPGSIIVTATNFCPPNFAQSNDNGGWCNPPLQHFDL 132

Query: 711  AEPAFLQIAQYRAGIVPVSFRRVPCVKKGGIRFTVNGHSYFNLVLITNVAGAGDVHAVSI 532
            AEPAFLQIAQYRAGIVPV+FRRVPC+KKGGIRFT+NGHSYFNLVLITNV GAGDVH+VSI
Sbjct: 133  AEPAFLQIAQYRAGIVPVTFRRVPCMKKGGIRFTINGHSYFNLVLITNVGGAGDVHSVSI 192

Query: 531  KGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTTSDGRTITSYNVA 391
            KGS+TGWQ MSRNWGQNWQSN+YLNGQSLSFQVTTSDGRT+TSYNVA
Sbjct: 193  KGSRTGWQPMSRNWGQNWQSNNYLNGQSLSFQVTTSDGRTVTSYNVA 239


>gb|AAG13982.1|AF297521_1 expansin 1 [Prunus avium] gi|13898651|gb|AAK48846.1|AF350937_1
            expansin [Prunus cerasus]
          Length = 254

 Score =  410 bits (1055), Expect = e-112
 Identities = 189/227 (83%), Positives = 203/227 (89%)
 Frame = -2

Query: 1071 LLFTLFNIFLHGAYGDYGGWEGAHATFYXXXXXXXXXXXXXGYGNLYSQGYGTDTAALST 892
            L   LFN+ LHGA+ DYGGWEGAHATFY             GYGNLYSQGYGT+TAALST
Sbjct: 13   LSLVLFNLHLHGAFADYGGWEGAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALST 72

Query: 891  ALFNNGLSCGSCYQMRCNDDPRWCLPGTITVTATNFCPPNPAQPNDNGGWCNPPLQHFDL 712
            ALFNNGLSCGSCY+MRCN+DPRWC PG+I VTATNFCPPN AQ NDNGGWCNPPLQHFDL
Sbjct: 73   ALFNNGLSCGSCYEMRCNNDPRWCRPGSIIVTATNFCPPNFAQSNDNGGWCNPPLQHFDL 132

Query: 711  AEPAFLQIAQYRAGIVPVSFRRVPCVKKGGIRFTVNGHSYFNLVLITNVAGAGDVHAVSI 532
            AEPAFLQIAQYRAGIVPV+FRRVPC+KKGGIRFT+NGHSYFNLVLITNV GAGDVH+VSI
Sbjct: 133  AEPAFLQIAQYRAGIVPVTFRRVPCMKKGGIRFTINGHSYFNLVLITNVGGAGDVHSVSI 192

Query: 531  KGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTTSDGRTITSYNVA 391
            KGS+TGWQ MSRNWGQNWQSN+YLNGQSLSFQVTTSDGRT+T+YNVA
Sbjct: 193  KGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFQVTTSDGRTVTNYNVA 239


>gb|AAR09169.1| alpha-expansin 2 [Populus tremula x Populus tremuloides]
          Length = 250

 Score =  409 bits (1051), Expect = e-112
 Identities = 188/226 (83%), Positives = 203/226 (89%)
 Frame = -2

Query: 1074 ILLFTLFNIFLHGAYGDYGGWEGAHATFYXXXXXXXXXXXXXGYGNLYSQGYGTDTAALS 895
            +LLF  F+  L G + DYGGW+G HATFY             GYGNLYSQGYGT TAALS
Sbjct: 10   LLLFICFH--LQGIFADYGGWQGGHATFYGGGDATGTMGGACGYGNLYSQGYGTSTAALS 67

Query: 894  TALFNNGLSCGSCYQMRCNDDPRWCLPGTITVTATNFCPPNPAQPNDNGGWCNPPLQHFD 715
            TALFNNGLSCGSCY+MRC+DDP+WCLPGTITVTATNFCPPNP+QPN+NGGWCNPPLQHFD
Sbjct: 68   TALFNNGLSCGSCYEMRCDDDPKWCLPGTITVTATNFCPPNPSQPNNNGGWCNPPLQHFD 127

Query: 714  LAEPAFLQIAQYRAGIVPVSFRRVPCVKKGGIRFTVNGHSYFNLVLITNVAGAGDVHAVS 535
            +AEPAFLQIAQYRAGIVPV+FRRVPCVKKGGIRFT+NGHSYFNLVLITNV GAGDVH+VS
Sbjct: 128  MAEPAFLQIAQYRAGIVPVAFRRVPCVKKGGIRFTINGHSYFNLVLITNVGGAGDVHSVS 187

Query: 534  IKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTTSDGRTITSYN 397
            IKGSKTGWQAMSRNWGQNWQSN+YLNGQSLSFQVTTSDGRT+TSYN
Sbjct: 188  IKGSKTGWQAMSRNWGQNWQSNTYLNGQSLSFQVTTSDGRTVTSYN 233


>dbj|BAC67190.1| expansin [Pyrus communis]
          Length = 254

 Score =  407 bits (1047), Expect = e-111
 Identities = 195/241 (80%), Positives = 208/241 (86%), Gaps = 1/241 (0%)
 Frame = -2

Query: 1110 MAIHLLYNNTLPILL-FTLFNIFLHGAYGDYGGWEGAHATFYXXXXXXXXXXXXXGYGNL 934
            MA H L  +  PI L   LFN+ LHG +  YG WEGAHATFY             GYGNL
Sbjct: 1    MAAHAL--SFAPIALSVVLFNLHLHGVFAVYGSWEGAHATFYGGGDASGTMGGACGYGNL 58

Query: 933  YSQGYGTDTAALSTALFNNGLSCGSCYQMRCNDDPRWCLPGTITVTATNFCPPNPAQPND 754
            YSQGYGT+TAALSTALFNNGLSCGSCY+MRC++DPRWC PG+I VTATNFCPPN AQ ND
Sbjct: 59   YSQGYGTNTAALSTALFNNGLSCGSCYEMRCDNDPRWCRPGSIIVTATNFCPPNFAQSND 118

Query: 753  NGGWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCVKKGGIRFTVNGHSYFNLVLI 574
            NGGWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCVKKGGIRFT+NGHSYFNLVLI
Sbjct: 119  NGGWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCVKKGGIRFTINGHSYFNLVLI 178

Query: 573  TNVAGAGDVHAVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTTSDGRTITSYNV 394
            TNVAGAGDVH+VSIKGS+TGWQ MSRNWGQNWQSNSYLNGQ+LSFQVTTSDGRT+TSYNV
Sbjct: 179  TNVAGAGDVHSVSIKGSRTGWQPMSRNWGQNWQSNSYLNGQALSFQVTTSDGRTVTSYNV 238

Query: 393  A 391
            A
Sbjct: 239  A 239


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