BLASTX nr result

ID: Coptis25_contig00003661 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003661
         (1265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264990.1| PREDICTED: uncharacterized protein At4g00950...   140   5e-31
ref|XP_002523324.1| conserved hypothetical protein [Ricinus comm...   121   3e-25
ref|XP_002321992.1| predicted protein [Populus trichocarpa] gi|2...   121   4e-25
gb|ADN33748.1| hypothetical protein [Cucumis melo subsp. melo]        109   1e-21
emb|CBI23018.3| unnamed protein product [Vitis vinifera]              104   5e-20

>ref|XP_002264990.1| PREDICTED: uncharacterized protein At4g00950 [Vitis vinifera]
            gi|147794098|emb|CAN71155.1| hypothetical protein
            VITISV_030317 [Vitis vinifera]
            gi|297745486|emb|CBI40566.3| unnamed protein product
            [Vitis vinifera]
          Length = 228

 Score =  140 bits (354), Expect = 5e-31
 Identities = 97/239 (40%), Positives = 125/239 (52%), Gaps = 13/239 (5%)
 Frame = -3

Query: 1125 MGFEAVPEPSSTPKISYFSLPSQXXXXXXXXXXXXXXPSSIPFFWEEAPGKPRXXXXXXX 946
            MG +A  +PS  PK+  FS+  Q               +S+PF WEE PGKPR       
Sbjct: 1    MGSQAESDPSYAPKLPLFSIAMQEPEPSGTQTPPLQTTASVPFRWEEEPGKPR-----PC 55

Query: 945  XXXXTFSKPSSARCLELPPRLL-SEVKSTNMPSPSTVLDGPYIARSVSHSAVF--ARERL 775
                  SK SSARCL+ PPRL  S+VK + MPSP+TVL+GPY+ARS    + F  AR+R 
Sbjct: 56   TALVALSKSSSARCLDPPPRLFSSDVKLSKMPSPTTVLEGPYVARSAFQCSSFRVARDRR 115

Query: 774  ASFQELGSISKRRESK----EKGYFAAWGRKSTKRSTRVCED-SCAISSCPSSLG----G 622
             SF   GS  + +        +G+F  WGRK+ K              S P++ G    G
Sbjct: 116  HSFGRGGSPERGQLGAMVLGRRGFFGGWGRKNHKGKREASRSLDLEEGSSPATTGDYDSG 175

Query: 621  AGDSEDITKVKITRFRRTGSLFNLSSSRPHSHLWASIYGTFKQVVPRPW-RSRKTRKDG 448
             G SE     K+TR  R+G   +LS +R  SH WAS+Y   KQVV  PW RS+K +KDG
Sbjct: 176  GGSSE-----KMTRMSRSGRYLSLSQAR--SHFWASVYEGLKQVV--PWKRSKKLKKDG 225


>ref|XP_002523324.1| conserved hypothetical protein [Ricinus communis]
            gi|223537412|gb|EEF39040.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 239

 Score =  121 bits (304), Expect = 3e-25
 Identities = 94/250 (37%), Positives = 118/250 (47%), Gaps = 23/250 (9%)
 Frame = -3

Query: 1125 MGFEAVPEPSSTPKISYFSLPSQXXXXXXXXXXXXXXPSS--IPFFWEEAPGKPRXXXXX 952
            MG EA  E SSTP++  F  P                 SS  +PF WEE PGKPR     
Sbjct: 1    MGSEAEAEDSSTPRLPLFLKPPYVQSPQRSGMLTPPLYSSAAVPFRWEEEPGKPRECSGA 60

Query: 951  XXXXXXTFSKPSSARCLELPPRLLSEVKSTNMPSPSTVLDGPYIARS----VSHSAVFAR 784
                        S +CLELPPRLL E   + +PSP+TVLDGPY  RS     S   +  R
Sbjct: 61   ITTPTDL-----SPKCLELPPRLLLEANVSKLPSPTTVLDGPYTGRSSRFQSSSFRMIRR 115

Query: 783  ERLASF--------QELGSISKRRESKEKGYFAA--WGRKSTKRSTRVCEDSCAISSCPS 634
            E   SF        Q    +  +R  K++G+  +  WGR+  K    V   S    S  S
Sbjct: 116  ECYGSFRTCSPERDQFTALVLSKRGIKDRGFLGSWRWGRRGFKGKREVAGASYVFPS--S 173

Query: 633  SL-----GGAGDSEDIT--KVKITRFRRTGSLFNLSSSRPHSHLWASIYGTFKQVVPRPW 475
            S+      G  + ++I+   V ITR RR+GS     S+   SH WA+IY   KQVV  PW
Sbjct: 174  SMDREVEDGNEEEKEISSKNVTITRIRRSGSF----STSSRSHFWATIYEGLKQVV--PW 227

Query: 474  RSRKTRKDGF 445
            RS K +KDGF
Sbjct: 228  RSGKLKKDGF 237


>ref|XP_002321992.1| predicted protein [Populus trichocarpa] gi|222868988|gb|EEF06119.1|
            predicted protein [Populus trichocarpa]
          Length = 203

 Score =  121 bits (303), Expect = 4e-25
 Identities = 88/228 (38%), Positives = 114/228 (50%), Gaps = 5/228 (2%)
 Frame = -3

Query: 1134 DRKMGFEAVPEPSSTPKISYFSLPSQXXXXXXXXXXXXXXP-SSIPFFWEEAPGKPRXXX 958
            D ++G++    PS TPK+S FSL S+                +S+PF WEEAPGKPR   
Sbjct: 5    DDQLGYD----PSPTPKLSLFSLSSKLHESPAGMLTPPIHTLASVPFKWEEAPGKPRPSC 60

Query: 957  XXXXXXXXTFSKPSSARCLELPPRLLSEVKSTNMPSPSTVLDGPYIARSVSHSAVFARER 778
                      SKP  ARCLELPPRLL+E K +NMPSP+TV DGPY+ RS+S   +     
Sbjct: 61   ATQ-------SKPKFARCLELPPRLLNEAKVSNMPSPTTVFDGPYLPRSLS---LGKGRS 110

Query: 777  LASFQELGSISKRRESKEKGYFAA--WG--RKSTKRSTRVCEDSCAISSCPSSLGGAGDS 610
            L++ + LG       SKE+  F +  WG  RK+ K            +     +G     
Sbjct: 111  LSNLENLG--CGEVNSKERVTFGSGRWGFFRKNNKE---------VAAPSHGDIGVNHGG 159

Query: 609  EDITKVKITRFRRTGSLFNLSSSRPHSHLWASIYGTFKQVVPRPWRSR 466
             +  +VKITR RR  S   LS +R  SH W  I  +FK  V  PW  R
Sbjct: 160  REAVRVKITRIRRRSSFLGLSHTR--SHFWTDICESFKHAV--PWTRR 203


>gb|ADN33748.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 234

 Score =  109 bits (273), Expect = 1e-21
 Identities = 78/233 (33%), Positives = 106/233 (45%), Gaps = 5/233 (2%)
 Frame = -3

Query: 1125 MGFEAVPEPSSTP-KISYFSLPSQXXXXXXXXXXXXXXPSSIPFFWEEAPGKPRXXXXXX 949
            M F     PSSTP K+S FSLP Q                S+PF WEEAPGKPR      
Sbjct: 1    MRFVTGENPSSTPPKLSLFSLPRQPPEPPGMVTPPLHASISVPFQWEEAPGKPRPFGIIE 60

Query: 948  XXXXXTFSKPSSARCLELPPRLLSEVKSTNMPSPSTVLDGPYIARSVSHSAVF----ARE 781
                   SKP SAR L+LPPRL ++ K  +  SP+T +D P   R +S S  F       
Sbjct: 61   PN-----SKPKSARSLDLPPRLFADAKVAHFASPTTAVDEPIFGRDLSSSLSFRFPDTWA 115

Query: 780  RLASFQELGSISKRRESKEKGYFAAWGRKSTKRSTRVCEDSCAISSCPSSLGGAGDSEDI 601
                     + +  RE K+  Y  +    S +++  + +    I+         G S+  
Sbjct: 116  ETVRATATATATGTREGKDGKYVGSRRWMSFRKNKEIPKSGSEIAVTGGGDRNVGSSDGE 175

Query: 600  TKVKITRFRRTGSLFNLSSSRPHSHLWASIYGTFKQVVPRPWRSRKTRKDGFS 442
            T+VKITRFR   S F   +S+  SH  A+IYG+ KQ +   WR +    +  S
Sbjct: 176  TRVKITRFRSRRSFFRKPNSK--SHFIANIYGSLKQAI--SWRRKGDEMENIS 224


>emb|CBI23018.3| unnamed protein product [Vitis vinifera]
          Length = 194

 Score =  104 bits (259), Expect = 5e-20
 Identities = 75/206 (36%), Positives = 103/206 (50%)
 Frame = -3

Query: 1137 RDRKMGFEAVPEPSSTPKISYFSLPSQXXXXXXXXXXXXXXPSSIPFFWEEAPGKPRXXX 958
            +D++MG +    P S+PK+  +SLP +                S+PF WEEAPGKPR   
Sbjct: 2    KDQEMGSDQFL-PISSPKLPIYSLPVKKEEPPGMLTPPLQAAVSVPFEWEEAPGKPRAWN 60

Query: 957  XXXXXXXXTFSKPSSARCLELPPRLLSEVKSTNMPSPSTVLDGPYIARSVSHSAVFARER 778
                       K  SARCL+LPPR+ + VK +++ SP+TVL+GPY+ RSVS      +  
Sbjct: 61   RG--------EKARSARCLDLPPRMSARVKISDVCSPTTVLEGPYVGRSVSFGNGGGKSD 112

Query: 777  LASFQELGSISKRRESKEKGYFAAWGRKSTKRSTRVCEDSCAISSCPSSLGGAGDSEDIT 598
             A  +     S+    KE G           R   V E   ++++     GG G+ E  T
Sbjct: 113  GAKERSRFGSSRWMSLKENGEVGG------VRGGDVEEPGGSVAA-----GGGGEKE--T 159

Query: 597  KVKITRFRRTGSLFNLSSSRPHSHLW 520
            KVKITR  R GS   +SS+R  SHLW
Sbjct: 160  KVKITRMTRKGSFLGMSSTR--SHLW 183


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