BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003657
         (1057 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143800.1| PREDICTED: chlorophyll a-b binding protein 6...   340   5e-93
emb|CBI31475.3| unnamed protein product [Vitis vinifera]              342   9e-92
ref|XP_002275552.1| PREDICTED: chlorophyll a-b binding protein 6...   342   9e-92
gb|AAA34140.1| chlorophyll a/b-binding protein [Solanum lycopers...   337   2e-91
ref|XP_003548023.1| PREDICTED: chlorophyll a-b binding protein 6...   340   3e-91

>ref|XP_004143800.1| PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic-like
           [Cucumis sativus] gi|449525097|ref|XP_004169556.1|
           PREDICTED: chlorophyll a-b binding protein 6A,
           chloroplastic-like [Cucumis sativus]
          Length = 246

 Score =  340 bits (871), Expect(2) = 5e-93
 Identities = 159/172 (92%), Positives = 166/172 (96%)
 Frame = -3

Query: 680 LGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEWAALPGGQATYLGNP 501
           LGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWV+AQEWAA+PGGQATYLG P
Sbjct: 75  LGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAVPGGQATYLGQP 134

Query: 500 VPWGTLPIILAIEFLAISFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPAKFEEYKLKEI 321
           VPWGTLP IL IEFLAI+FVEHQRSMEKDPEKKKYPGGAFDPLGYSKDP K +EYK+KEI
Sbjct: 135 VPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEI 194

Query: 320 KNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIVIPRSIYP 165
           KNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDI+IPR+I P
Sbjct: 195 KNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP 246



 Score = 28.9 bits (63), Expect(2) = 5e-93
 Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
 Frame = -2

Query: 876 MASNALRSCGVA-AVXXXXXXXXXXXXXXSIAFQGVSTNASSRF 748
           MASN L SCG+A                  +   GV+ NASSRF
Sbjct: 1   MASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRF 44


>emb|CBI31475.3| unnamed protein product [Vitis vinifera]
          Length = 201

 Score =  342 bits (877), Expect = 9e-92
 Identities = 158/172 (91%), Positives = 167/172 (97%)
 Frame = -3

Query: 680 LGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEWAALPGGQATYLGNP 501
           LGEVPENLER+KESELIHCRWAMLAVPG+LVPEALGLGNWVQAQEWAA+PGGQATYLGNP
Sbjct: 30  LGEVPENLERYKESELIHCRWAMLAVPGVLVPEALGLGNWVQAQEWAAIPGGQATYLGNP 89

Query: 500 VPWGTLPIILAIEFLAISFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPAKFEEYKLKEI 321
           VPWG LP ILAIEFLAI+FVEHQRSMEKD EKKKYPGGAFDPLGYSKDP KFEEYK+KEI
Sbjct: 90  VPWGNLPTILAIEFLAIAFVEHQRSMEKDTEKKKYPGGAFDPLGYSKDPVKFEEYKVKEI 149

Query: 320 KNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIVIPRSIYP 165
           KNGRLA+LAFVGFCVQQSAYPGTGPLENLA+HLADPWHNNIGD++IPRSI P
Sbjct: 150 KNGRLAILAFVGFCVQQSAYPGTGPLENLASHLADPWHNNIGDVIIPRSIMP 201


>ref|XP_002275552.1| PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic
           isoform 1 [Vitis vinifera] gi|147800947|emb|CAN75566.1|
           hypothetical protein VITISV_032585 [Vitis vinifera]
          Length = 244

 Score =  342 bits (877), Expect = 9e-92
 Identities = 158/172 (91%), Positives = 167/172 (97%)
 Frame = -3

Query: 680 LGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEWAALPGGQATYLGNP 501
           LGEVPENLER+KESELIHCRWAMLAVPG+LVPEALGLGNWVQAQEWAA+PGGQATYLGNP
Sbjct: 73  LGEVPENLERYKESELIHCRWAMLAVPGVLVPEALGLGNWVQAQEWAAIPGGQATYLGNP 132

Query: 500 VPWGTLPIILAIEFLAISFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPAKFEEYKLKEI 321
           VPWG LP ILAIEFLAI+FVEHQRSMEKD EKKKYPGGAFDPLGYSKDP KFEEYK+KEI
Sbjct: 133 VPWGNLPTILAIEFLAIAFVEHQRSMEKDTEKKKYPGGAFDPLGYSKDPVKFEEYKVKEI 192

Query: 320 KNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIVIPRSIYP 165
           KNGRLA+LAFVGFCVQQSAYPGTGPLENLA+HLADPWHNNIGD++IPRSI P
Sbjct: 193 KNGRLAILAFVGFCVQQSAYPGTGPLENLASHLADPWHNNIGDVIIPRSIMP 244


>gb|AAA34140.1| chlorophyll a/b-binding protein [Solanum lycopersicum]
           gi|225895|prf||1402358A photosystem I protein CAB
          Length = 246

 Score =  337 bits (864), Expect(2) = 2e-91
 Identities = 156/172 (90%), Positives = 166/172 (96%)
 Frame = -3

Query: 680 LGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEWAALPGGQATYLGNP 501
           LGEVP NLER+KESELIHCRWAMLAVPGI+VPEALGLGNWV+AQEWAA+PGGQATYLG P
Sbjct: 74  LGEVPANLERYKESELIHCRWAMLAVPGIIVPEALGLGNWVKAQEWAAIPGGQATYLGQP 133

Query: 500 VPWGTLPIILAIEFLAISFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPAKFEEYKLKEI 321
           VPWGTLP ILAIEFLAI+FVEHQRSMEKD EKKKYPGGAFDPLGYSKDPAKFEE K+KEI
Sbjct: 134 VPWGTLPTILAIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGYSKDPAKFEELKVKEI 193

Query: 320 KNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIVIPRSIYP 165
           KNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGD++IP+ I+P
Sbjct: 194 KNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDVIIPKGIFP 245



 Score = 26.2 bits (56), Expect(2) = 2e-91
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = -2

Query: 876 MASNALRSCGVAAVXXXXXXXXXXXXXXSIAFQGVSTNASSRF 748
           MASN L SCG+ AV              ++     +TN+ SRF
Sbjct: 1   MASNTLMSCGIPAVCPSFLSSTKSKFAAAMPVSVGATNSMSRF 43


>ref|XP_003548023.1| PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic-like
           [Glycine max]
          Length = 246

 Score =  340 bits (872), Expect = 3e-91
 Identities = 159/172 (92%), Positives = 166/172 (96%)
 Frame = -3

Query: 680 LGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEWAALPGGQATYLGNP 501
           LGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWV+AQEWAA+PGGQATYLGNP
Sbjct: 75  LGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAVPGGQATYLGNP 134

Query: 500 VPWGTLPIILAIEFLAISFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPAKFEEYKLKEI 321
           VPWGTLP ILAIEFLAISFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDP  F EYK+KEI
Sbjct: 135 VPWGTLPTILAIEFLAISFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPKTFHEYKVKEI 194

Query: 320 KNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIVIPRSIYP 165
           KNGRLALLAFVGFCVQQSAYPGTGPLENLA HLADPWHNNIG+++IP+SI P
Sbjct: 195 KNGRLALLAFVGFCVQQSAYPGTGPLENLAAHLADPWHNNIGNVIIPQSILP 246