BLASTX nr result
ID: Coptis25_contig00003657
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00003657 (1057 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004143800.1| PREDICTED: chlorophyll a-b binding protein 6... 340 5e-93 emb|CBI31475.3| unnamed protein product [Vitis vinifera] 342 9e-92 ref|XP_002275552.1| PREDICTED: chlorophyll a-b binding protein 6... 342 9e-92 gb|AAA34140.1| chlorophyll a/b-binding protein [Solanum lycopers... 337 2e-91 ref|XP_003548023.1| PREDICTED: chlorophyll a-b binding protein 6... 340 3e-91 >ref|XP_004143800.1| PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic-like [Cucumis sativus] gi|449525097|ref|XP_004169556.1| PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic-like [Cucumis sativus] Length = 246 Score = 340 bits (871), Expect(2) = 5e-93 Identities = 159/172 (92%), Positives = 166/172 (96%) Frame = -3 Query: 680 LGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEWAALPGGQATYLGNP 501 LGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWV+AQEWAA+PGGQATYLG P Sbjct: 75 LGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAVPGGQATYLGQP 134 Query: 500 VPWGTLPIILAIEFLAISFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPAKFEEYKLKEI 321 VPWGTLP IL IEFLAI+FVEHQRSMEKDPEKKKYPGGAFDPLGYSKDP K +EYK+KEI Sbjct: 135 VPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEI 194 Query: 320 KNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIVIPRSIYP 165 KNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDI+IPR+I P Sbjct: 195 KNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP 246 Score = 28.9 bits (63), Expect(2) = 5e-93 Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 1/44 (2%) Frame = -2 Query: 876 MASNALRSCGVA-AVXXXXXXXXXXXXXXSIAFQGVSTNASSRF 748 MASN L SCG+A + GV+ NASSRF Sbjct: 1 MASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRF 44 >emb|CBI31475.3| unnamed protein product [Vitis vinifera] Length = 201 Score = 342 bits (877), Expect = 9e-92 Identities = 158/172 (91%), Positives = 167/172 (97%) Frame = -3 Query: 680 LGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEWAALPGGQATYLGNP 501 LGEVPENLER+KESELIHCRWAMLAVPG+LVPEALGLGNWVQAQEWAA+PGGQATYLGNP Sbjct: 30 LGEVPENLERYKESELIHCRWAMLAVPGVLVPEALGLGNWVQAQEWAAIPGGQATYLGNP 89 Query: 500 VPWGTLPIILAIEFLAISFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPAKFEEYKLKEI 321 VPWG LP ILAIEFLAI+FVEHQRSMEKD EKKKYPGGAFDPLGYSKDP KFEEYK+KEI Sbjct: 90 VPWGNLPTILAIEFLAIAFVEHQRSMEKDTEKKKYPGGAFDPLGYSKDPVKFEEYKVKEI 149 Query: 320 KNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIVIPRSIYP 165 KNGRLA+LAFVGFCVQQSAYPGTGPLENLA+HLADPWHNNIGD++IPRSI P Sbjct: 150 KNGRLAILAFVGFCVQQSAYPGTGPLENLASHLADPWHNNIGDVIIPRSIMP 201 >ref|XP_002275552.1| PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic isoform 1 [Vitis vinifera] gi|147800947|emb|CAN75566.1| hypothetical protein VITISV_032585 [Vitis vinifera] Length = 244 Score = 342 bits (877), Expect = 9e-92 Identities = 158/172 (91%), Positives = 167/172 (97%) Frame = -3 Query: 680 LGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEWAALPGGQATYLGNP 501 LGEVPENLER+KESELIHCRWAMLAVPG+LVPEALGLGNWVQAQEWAA+PGGQATYLGNP Sbjct: 73 LGEVPENLERYKESELIHCRWAMLAVPGVLVPEALGLGNWVQAQEWAAIPGGQATYLGNP 132 Query: 500 VPWGTLPIILAIEFLAISFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPAKFEEYKLKEI 321 VPWG LP ILAIEFLAI+FVEHQRSMEKD EKKKYPGGAFDPLGYSKDP KFEEYK+KEI Sbjct: 133 VPWGNLPTILAIEFLAIAFVEHQRSMEKDTEKKKYPGGAFDPLGYSKDPVKFEEYKVKEI 192 Query: 320 KNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIVIPRSIYP 165 KNGRLA+LAFVGFCVQQSAYPGTGPLENLA+HLADPWHNNIGD++IPRSI P Sbjct: 193 KNGRLAILAFVGFCVQQSAYPGTGPLENLASHLADPWHNNIGDVIIPRSIMP 244 >gb|AAA34140.1| chlorophyll a/b-binding protein [Solanum lycopersicum] gi|225895|prf||1402358A photosystem I protein CAB Length = 246 Score = 337 bits (864), Expect(2) = 2e-91 Identities = 156/172 (90%), Positives = 166/172 (96%) Frame = -3 Query: 680 LGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEWAALPGGQATYLGNP 501 LGEVP NLER+KESELIHCRWAMLAVPGI+VPEALGLGNWV+AQEWAA+PGGQATYLG P Sbjct: 74 LGEVPANLERYKESELIHCRWAMLAVPGIIVPEALGLGNWVKAQEWAAIPGGQATYLGQP 133 Query: 500 VPWGTLPIILAIEFLAISFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPAKFEEYKLKEI 321 VPWGTLP ILAIEFLAI+FVEHQRSMEKD EKKKYPGGAFDPLGYSKDPAKFEE K+KEI Sbjct: 134 VPWGTLPTILAIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGYSKDPAKFEELKVKEI 193 Query: 320 KNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIVIPRSIYP 165 KNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGD++IP+ I+P Sbjct: 194 KNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDVIIPKGIFP 245 Score = 26.2 bits (56), Expect(2) = 2e-91 Identities = 15/43 (34%), Positives = 20/43 (46%) Frame = -2 Query: 876 MASNALRSCGVAAVXXXXXXXXXXXXXXSIAFQGVSTNASSRF 748 MASN L SCG+ AV ++ +TN+ SRF Sbjct: 1 MASNTLMSCGIPAVCPSFLSSTKSKFAAAMPVSVGATNSMSRF 43 >ref|XP_003548023.1| PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic-like [Glycine max] Length = 246 Score = 340 bits (872), Expect = 3e-91 Identities = 159/172 (92%), Positives = 166/172 (96%) Frame = -3 Query: 680 LGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEWAALPGGQATYLGNP 501 LGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWV+AQEWAA+PGGQATYLGNP Sbjct: 75 LGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAVPGGQATYLGNP 134 Query: 500 VPWGTLPIILAIEFLAISFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPAKFEEYKLKEI 321 VPWGTLP ILAIEFLAISFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDP F EYK+KEI Sbjct: 135 VPWGTLPTILAIEFLAISFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPKTFHEYKVKEI 194 Query: 320 KNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIVIPRSIYP 165 KNGRLALLAFVGFCVQQSAYPGTGPLENLA HLADPWHNNIG+++IP+SI P Sbjct: 195 KNGRLALLAFVGFCVQQSAYPGTGPLENLAAHLADPWHNNIGNVIIPQSILP 246