BLASTX nr result
ID: Coptis25_contig00003653
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00003653 (609 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AEC12443.1| chromomethylase 3 [Gossypium hirsutum] 73 5e-11 ref|XP_003517640.1| PREDICTED: DNA (cytosine-5)-methyltransferas... 67 3e-09 ref|XP_002299134.1| DNA methyltransferase [Populus trichocarpa] ... 65 1e-08 gb|ABW96889.1| CMT-type DNA-methyltransferase [Elaeis guineensis] 60 2e-07 ref|XP_002892459.1| strictosidine synthase family protein [Arabi... 60 4e-07 >gb|AEC12443.1| chromomethylase 3 [Gossypium hirsutum] Length = 824 Score = 72.8 bits (177), Expect = 5e-11 Identities = 38/89 (42%), Positives = 55/89 (61%), Gaps = 11/89 (12%) Frame = +2 Query: 338 NKRKNKEKITESNSWEDNSLCRFLGEAISVDEARRRWPFRYEKK----------DGKEEE 487 N +K K+ + + ED +FLGE + +EARRRWP RY+ K +G EE Sbjct: 27 NSKKTKKDVAVN---EDEEETKFLGEPVDDEEARRRWPKRYQGKGAKKVISKSSNGDSEE 83 Query: 488 VMIARRHFSQALVHGC-VYNLYDDVHVQS 571 ++ ARRH++QA V GC ++NLYDD HV++ Sbjct: 84 IIQARRHYTQAKVDGCMIFNLYDDAHVKA 112 >ref|XP_003517640.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT3-like [Glycine max] Length = 868 Score = 66.6 bits (161), Expect = 3e-09 Identities = 36/84 (42%), Positives = 53/84 (63%), Gaps = 14/84 (16%) Frame = +2 Query: 362 ITESN-SWEDNSLCRFLGEAISVDEARRRWPFRYEKKDGK------------EEEVMIAR 502 +T+ N S + + RF+GE + +EARRRWP RY++K+ K +EE+ AR Sbjct: 61 VTDGNVSDGEGTNARFVGEPVPDEEARRRWPKRYQEKEKKQSAGPKSNRNDEDEEIQQAR 120 Query: 503 RHFSQALVHGC-VYNLYDDVHVQS 571 RH++QA V GC +Y LYDD HV++ Sbjct: 121 RHYTQAEVDGCMLYKLYDDAHVKA 144 >ref|XP_002299134.1| DNA methyltransferase [Populus trichocarpa] gi|222846392|gb|EEE83939.1| DNA methyltransferase [Populus trichocarpa] Length = 973 Score = 64.7 bits (156), Expect = 1e-08 Identities = 52/175 (29%), Positives = 78/175 (44%), Gaps = 23/175 (13%) Frame = +2 Query: 116 VSTSKRERWREFVAKREKEDLSPNVSSITDDYVDEYSDVEQKGLDDVENDQFXXXXXXXX 295 ++T+ R R E A+ E++ +PN S + + V + + E+ LD E+D Sbjct: 84 LTTATRSRLMEKEAE-EEQSTAPNRSRLREKKVKK-EETEEVFLDAEEDDTNSIDEVGAK 141 Query: 296 XXXXKGKLFVRKILNKRKNKEK----------ITESNSWEDNSLCRFLGEAISVDEARRR 445 G + K K KEK E ED + RF+G + EAR++ Sbjct: 142 MGTDNGD---SRSETKEKEKEKRGSGKTKKISTPEKAKEEDGTPARFVGNQVPDAEARKK 198 Query: 446 WPFRYEKKDGKE-------------EEVMIARRHFSQALVHGCVYNLYDDVHVQS 571 WP RY K + EE++ AR H+ +A V G +YNLYDD HVQ+ Sbjct: 199 WPHRYANKIKNKTPISKPSNSLDDSEEIIKARCHYKRAEVDGIIYNLYDDAHVQA 253 >gb|ABW96889.1| CMT-type DNA-methyltransferase [Elaeis guineensis] Length = 925 Score = 60.5 bits (145), Expect = 2e-07 Identities = 36/91 (39%), Positives = 53/91 (58%), Gaps = 13/91 (14%) Frame = +2 Query: 338 NKRKNKEKITESNSWEDNSLCRFLGEAISVDEARRRWPFRYEKKD-GK------------ 478 +K+K EK E C F+GE + DEA++RWP RY++K+ GK Sbjct: 117 SKKKGNEKEVEH--------C-FVGEPVPDDEAKKRWPERYQRKNAGKRALASASSKKSD 167 Query: 479 EEEVMIARRHFSQALVHGCVYNLYDDVHVQS 571 EEEV+ ARRH+ QA+V +YNL DD ++++ Sbjct: 168 EEEVLKARRHYWQAMVDNVIYNLNDDAYIKA 198 >ref|XP_002892459.1| strictosidine synthase family protein [Arabidopsis lyrata subsp. lyrata] gi|297338301|gb|EFH68718.1| strictosidine synthase family protein [Arabidopsis lyrata subsp. lyrata] Length = 390 Score = 59.7 bits (143), Expect = 4e-07 Identities = 25/38 (65%), Positives = 32/38 (84%) Frame = +3 Query: 45 NPLKHSSVSKYPDFEAYKVDLLPWSALPKERDGENLLQ 158 +P HSS+SK+PDF+ YK+D+ P S+LPKERD ENLLQ Sbjct: 20 DPFSHSSISKFPDFKTYKIDMPPLSSLPKERDRENLLQ 57