BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003653
         (609 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEC12443.1| chromomethylase 3 [Gossypium hirsutum]                  73   5e-11
ref|XP_003517640.1| PREDICTED: DNA (cytosine-5)-methyltransferas...    67   3e-09
ref|XP_002299134.1| DNA methyltransferase [Populus trichocarpa] ...    65   1e-08
gb|ABW96889.1| CMT-type DNA-methyltransferase [Elaeis guineensis]      60   2e-07
ref|XP_002892459.1| strictosidine synthase family protein [Arabi...    60   4e-07

>gb|AEC12443.1| chromomethylase 3 [Gossypium hirsutum]
          Length = 824

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 38/89 (42%), Positives = 55/89 (61%), Gaps = 11/89 (12%)
 Frame = +2

Query: 338 NKRKNKEKITESNSWEDNSLCRFLGEAISVDEARRRWPFRYEKK----------DGKEEE 487
           N +K K+ +  +   ED    +FLGE +  +EARRRWP RY+ K          +G  EE
Sbjct: 27  NSKKTKKDVAVN---EDEEETKFLGEPVDDEEARRRWPKRYQGKGAKKVISKSSNGDSEE 83

Query: 488 VMIARRHFSQALVHGC-VYNLYDDVHVQS 571
           ++ ARRH++QA V GC ++NLYDD HV++
Sbjct: 84  IIQARRHYTQAKVDGCMIFNLYDDAHVKA 112


>ref|XP_003517640.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT3-like [Glycine
           max]
          Length = 868

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 36/84 (42%), Positives = 53/84 (63%), Gaps = 14/84 (16%)
 Frame = +2

Query: 362 ITESN-SWEDNSLCRFLGEAISVDEARRRWPFRYEKKDGK------------EEEVMIAR 502
           +T+ N S  + +  RF+GE +  +EARRRWP RY++K+ K            +EE+  AR
Sbjct: 61  VTDGNVSDGEGTNARFVGEPVPDEEARRRWPKRYQEKEKKQSAGPKSNRNDEDEEIQQAR 120

Query: 503 RHFSQALVHGC-VYNLYDDVHVQS 571
           RH++QA V GC +Y LYDD HV++
Sbjct: 121 RHYTQAEVDGCMLYKLYDDAHVKA 144


>ref|XP_002299134.1| DNA methyltransferase [Populus trichocarpa]
           gi|222846392|gb|EEE83939.1| DNA methyltransferase
           [Populus trichocarpa]
          Length = 973

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 52/175 (29%), Positives = 78/175 (44%), Gaps = 23/175 (13%)
 Frame = +2

Query: 116 VSTSKRERWREFVAKREKEDLSPNVSSITDDYVDEYSDVEQKGLDDVENDQFXXXXXXXX 295
           ++T+ R R  E  A+ E++  +PN S + +  V +  + E+  LD  E+D          
Sbjct: 84  LTTATRSRLMEKEAE-EEQSTAPNRSRLREKKVKK-EETEEVFLDAEEDDTNSIDEVGAK 141

Query: 296 XXXXKGKLFVRKILNKRKNKEK----------ITESNSWEDNSLCRFLGEAISVDEARRR 445
                G     +   K K KEK            E    ED +  RF+G  +   EAR++
Sbjct: 142 MGTDNGD---SRSETKEKEKEKRGSGKTKKISTPEKAKEEDGTPARFVGNQVPDAEARKK 198

Query: 446 WPFRYEKKDGKE-------------EEVMIARRHFSQALVHGCVYNLYDDVHVQS 571
           WP RY  K   +             EE++ AR H+ +A V G +YNLYDD HVQ+
Sbjct: 199 WPHRYANKIKNKTPISKPSNSLDDSEEIIKARCHYKRAEVDGIIYNLYDDAHVQA 253


>gb|ABW96889.1| CMT-type DNA-methyltransferase [Elaeis guineensis]
          Length = 925

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 36/91 (39%), Positives = 53/91 (58%), Gaps = 13/91 (14%)
 Frame = +2

Query: 338 NKRKNKEKITESNSWEDNSLCRFLGEAISVDEARRRWPFRYEKKD-GK------------ 478
           +K+K  EK  E         C F+GE +  DEA++RWP RY++K+ GK            
Sbjct: 117 SKKKGNEKEVEH--------C-FVGEPVPDDEAKKRWPERYQRKNAGKRALASASSKKSD 167

Query: 479 EEEVMIARRHFSQALVHGCVYNLYDDVHVQS 571
           EEEV+ ARRH+ QA+V   +YNL DD ++++
Sbjct: 168 EEEVLKARRHYWQAMVDNVIYNLNDDAYIKA 198


>ref|XP_002892459.1| strictosidine synthase family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297338301|gb|EFH68718.1| strictosidine
           synthase family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 390

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 25/38 (65%), Positives = 32/38 (84%)
 Frame = +3

Query: 45  NPLKHSSVSKYPDFEAYKVDLLPWSALPKERDGENLLQ 158
           +P  HSS+SK+PDF+ YK+D+ P S+LPKERD ENLLQ
Sbjct: 20  DPFSHSSISKFPDFKTYKIDMPPLSSLPKERDRENLLQ 57