BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003635
         (1165 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004165738.1| PREDICTED: 40S ribosomal protein SA-like [Cu...   411   e-112
ref|XP_004144441.1| PREDICTED: 40S ribosomal protein SA-like [Cu...   411   e-112
gb|ABK26340.1| unknown [Picea sitchensis] gi|224285162|gb|ACN403...   407   e-111
gb|ABK24517.1| unknown [Picea sitchensis] gi|224285889|gb|ACN406...   406   e-111
gb|EAY90376.1| hypothetical protein OsI_11954 [Oryza sativa Indi...   405   e-111

>ref|XP_004165738.1| PREDICTED: 40S ribosomal protein SA-like [Cucumis sativus]
          Length = 309

 Score =  411 bits (1056), Expect = e-112
 Identities = 210/282 (74%), Positives = 228/282 (80%), Gaps = 8/282 (2%)
 Frame = +2

Query: 116 QKREDIQMMLAADVHLGTKNCDYQMERYVFKRRSDGIFIINLGKTWDKLHLAARVIVGIE 295
           QK  DIQMMLAA+VHLGTKNCD+QMERYVFKRR+DGI+IINLGKTW+KL LAARVIVGIE
Sbjct: 12  QKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIE 71

Query: 296 NPQDIIVQSARIYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQASFSEPRLLILTDPRT 475
           NPQDIIVQSAR YGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQ SF+EPRLLILTDPRT
Sbjct: 72  NPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRT 131

Query: 476 DHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVQQMRGAV 655
           DHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGK SIGCLFWLLARMV QMRG +
Sbjct: 132 DHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI 191

Query: 656 LPGKRWDVMVDLFFYREPEEAKDQEGDEIPAIPDYAAPGLQGPDTQWSNQGVDTQWTADV 835
             G +WDVMVDLFFYREPEEAK++E +E  A PDY      G     S+     QW   +
Sbjct: 192 RAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD-----QWAGQI 246

Query: 836 GDAQWN-PDLIPSQTVTPAV------VEYTQ-AAVSQEADEW 937
            DAQW  PDLIP+    P V      VE+TQ   V+  +D W
Sbjct: 247 SDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGW 288


>ref|XP_004144441.1| PREDICTED: 40S ribosomal protein SA-like [Cucumis sativus]
          Length = 309

 Score =  411 bits (1056), Expect = e-112
 Identities = 210/282 (74%), Positives = 228/282 (80%), Gaps = 8/282 (2%)
 Frame = +2

Query: 116 QKREDIQMMLAADVHLGTKNCDYQMERYVFKRRSDGIFIINLGKTWDKLHLAARVIVGIE 295
           QK  DIQMMLAA+VHLGTKNCD+QMERYVFKRR+DGI+IINLGKTW+KL LAARVIVGIE
Sbjct: 12  QKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIE 71

Query: 296 NPQDIIVQSARIYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQASFSEPRLLILTDPRT 475
           NPQDIIVQSAR YGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQ SF+EPRLLILTDPRT
Sbjct: 72  NPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRT 131

Query: 476 DHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVQQMRGAV 655
           DHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGK SIGCLFWLLARMV QMRG +
Sbjct: 132 DHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI 191

Query: 656 LPGKRWDVMVDLFFYREPEEAKDQEGDEIPAIPDYAAPGLQGPDTQWSNQGVDTQWTADV 835
             G +WDVMVDLFFYREPEEAK++E +E  A PDY      G     S+     QW   +
Sbjct: 192 RAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD-----QWAGQI 246

Query: 836 GDAQWN-PDLIPSQTVTPAV------VEYTQ-AAVSQEADEW 937
            DAQW  PDLIP+    P V      VE+TQ   V+  +D W
Sbjct: 247 SDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGW 288


>gb|ABK26340.1| unknown [Picea sitchensis] gi|224285162|gb|ACN40308.1| unknown
           [Picea sitchensis]
          Length = 319

 Score =  407 bits (1045), Expect = e-111
 Identities = 207/287 (72%), Positives = 227/287 (79%), Gaps = 6/287 (2%)
 Frame = +2

Query: 95  RKMALEIQKREDIQMMLAADVHLGTKNCDYQMERYVFKRRSDGIFIINLGKTWDKLHLAA 274
           +KM    QK  DIQMMLAADVHLGTKNCD+QMERYV+KRRSDGIFIINLGKTW+KL LAA
Sbjct: 3   QKMGGLSQKEADIQMMLAADVHLGTKNCDFQMERYVYKRRSDGIFIINLGKTWEKLQLAA 62

Query: 275 RVIVGIENPQDIIVQSARIYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQASFSEPRLL 454
           RVIV IENPQDIIVQSAR YGQRAVLKFAQYTGAHAIAGRHTPGTFTNQ+Q SF+EPRLL
Sbjct: 63  RVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQMQTSFNEPRLL 122

Query: 455 ILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMV 634
           ILTDPRTDHQPI+EAALGNIPTIAFCDTDSPM++VDIGIPANNKGK SIGCLFW+LARMV
Sbjct: 123 ILTDPRTDHQPIREAALGNIPTIAFCDTDSPMKHVDIGIPANNKGKHSIGCLFWMLARMV 182

Query: 635 QQMRGAVLPGKRWDVMVDLFFYREPEEAKDQEGDEIPA---IPDYAAPGLQGPDTQWSNQ 805
            QMRG +LPG +WD+MVDLFFYREPEEAK+ E +E P      DY AP L  P  QW   
Sbjct: 183 LQMRGTILPGHKWDIMVDLFFYREPEEAKEHEDEEAPVAEYTADYTAPALALPGDQWG-- 240

Query: 806 GVDTQWTADVGDAQW---NPDLIPSQTVTPAVVEYTQAAVSQEADEW 937
                  AD+ DAQW    P  IP+     A  ++   AV   A+ W
Sbjct: 241 -------ADIPDAQWGAPEPSAIPAVPAL-AASDWPGTAVPIAAEGW 279


>gb|ABK24517.1| unknown [Picea sitchensis] gi|224285889|gb|ACN40658.1| unknown
           [Picea sitchensis]
          Length = 319

 Score =  406 bits (1044), Expect = e-111
 Identities = 206/287 (71%), Positives = 227/287 (79%), Gaps = 6/287 (2%)
 Frame = +2

Query: 95  RKMALEIQKREDIQMMLAADVHLGTKNCDYQMERYVFKRRSDGIFIINLGKTWDKLHLAA 274
           +KM    QK  D+QMMLAADVHLGTKNCD+QMERYV+KRRSDGIFIINLGKTW+KL LAA
Sbjct: 3   QKMGGLSQKEADVQMMLAADVHLGTKNCDFQMERYVYKRRSDGIFIINLGKTWEKLQLAA 62

Query: 275 RVIVGIENPQDIIVQSARIYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQASFSEPRLL 454
           RVIV IENPQDIIVQSAR YGQRAVLKFAQYTGAHAIAGRHTPGTFTNQ+Q SF+EPRLL
Sbjct: 63  RVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQMQTSFNEPRLL 122

Query: 455 ILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMV 634
           ILTDPRTDHQPI+EAALGNIPTIAFCDTDSPM++VDIGIPANNKGK SIGCLFW+LARMV
Sbjct: 123 ILTDPRTDHQPIREAALGNIPTIAFCDTDSPMKHVDIGIPANNKGKHSIGCLFWMLARMV 182

Query: 635 QQMRGAVLPGKRWDVMVDLFFYREPEEAKDQEGDEIPA---IPDYAAPGLQGPDTQWSNQ 805
            QMRG +LPG +WD+MVDLFFYREPEEAK+ E +E P      DY AP L  P  QW   
Sbjct: 183 LQMRGTILPGHKWDIMVDLFFYREPEEAKEHEDEEAPVAEYTADYTAPALALPGDQWG-- 240

Query: 806 GVDTQWTADVGDAQW---NPDLIPSQTVTPAVVEYTQAAVSQEADEW 937
                  AD+ DAQW    P  IP+     A  ++   AV   A+ W
Sbjct: 241 -------ADIPDAQWGAPEPSAIPAVPAL-AASDWPGTAVPIAAEGW 279


>gb|EAY90376.1| hypothetical protein OsI_11954 [Oryza sativa Indica Group]
          Length = 310

 Score =  405 bits (1042), Expect = e-111
 Identities = 204/276 (73%), Positives = 220/276 (79%), Gaps = 2/276 (0%)
 Frame = +2

Query: 116 QKREDIQMMLAADVHLGTKNCDYQMERYVFKRRSDGIFIINLGKTWDKLHLAARVIVGIE 295
           Q+ +DIQMMLAADVHLGTKNCD+QMERYV+KRRSDGIFIINLGKTW+KL LAARVIV IE
Sbjct: 16  QREQDIQMMLAADVHLGTKNCDFQMERYVYKRRSDGIFIINLGKTWEKLQLAARVIVAIE 75

Query: 296 NPQDIIVQSARIYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQASFSEPRLLILTDPRT 475
           NPQDIIVQSAR YGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQ SFSEPRLLILTDPRT
Sbjct: 76  NPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRT 135

Query: 476 DHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVQQMRGAV 655
           DHQPIKE+ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMV QMRG +
Sbjct: 136 DHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGTI 195

Query: 656 LPGKRWDVMVDLFFYREPEEAKDQEGDEIPAIPDYAAPGLQG--PDTQWSNQGVDTQWTA 829
           LPG +WDVMVDLFFYR+PEEAK+QE +E    P+YAA    G  P   W           
Sbjct: 196 LPGHKWDVMVDLFFYRDPEEAKEQEEEEAAVGPEYAAVAEYGAAPTDNW----------- 244

Query: 830 DVGDAQWNPDLIPSQTVTPAVVEYTQAAVSQEADEW 937
             GD QW  ++ P         E+  A     A+ W
Sbjct: 245 --GDQQWGGEVQPPALPAAPTGEWGAAPAPVAAEGW 278