BLASTX nr result

ID: Coptis25_contig00003597 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003597
         (1003 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524017.1| transcription regulator, putative [Ricinus c...   143   7e-32
ref|XP_004143637.1| PREDICTED: uncharacterized protein LOC101210...   142   1e-31
gb|AFK38583.1| unknown [Lotus japonicus]                              141   3e-31
gb|AFK37245.1| unknown [Medicago truncatula]                          139   1e-30
gb|ABK23160.1| unknown [Picea sitchensis]                             139   1e-30

>ref|XP_002524017.1| transcription regulator, putative [Ricinus communis]
           gi|223536744|gb|EEF38385.1| transcription regulator,
           putative [Ricinus communis]
          Length = 174

 Score =  143 bits (360), Expect = 7e-32
 Identities = 78/105 (74%), Positives = 85/105 (80%)
 Frame = -1

Query: 601 GGVRRMSSSVRATPYHQQVNDSGSIDSPLMQSMHNKIKEQLNADVVVVEDANGDGRHVRI 422
           G V     S+RAT     VND+GSIDSPLMQSM  KIKE L+AD V+V+DA GDGRHV I
Sbjct: 70  GVVGNRRFSIRAT----HVNDAGSIDSPLMQSMEKKIKESLDADSVIVKDAYGDGRHVSI 125

Query: 421 NVISTAFEGQSAVNRQRMVYKAISEELQSVVHAVDQMITKTPAEA 287
           +VIS+AFEGQSAVNRQRMVYKAI EELQS VHAVDQM TKTPAEA
Sbjct: 126 DVISSAFEGQSAVNRQRMVYKAIWEELQSTVHAVDQMTTKTPAEA 170


>ref|XP_004143637.1| PREDICTED: uncharacterized protein LOC101210684 isoform 1 [Cucumis
           sativus]
          Length = 177

 Score =  142 bits (358), Expect = 1e-31
 Identities = 86/154 (55%), Positives = 107/154 (69%), Gaps = 1/154 (0%)
 Frame = -1

Query: 745 TVIRPYMTAAMVVRGLRISSHVAPSFNSFRSKTRPLATLFISFPP-PTAGGVRRMSSSVR 569
           +V+   +T+  V     ++  ++ S    RSK+  +A    +    P  G  R +S  +R
Sbjct: 25  SVVSRQVTSNCVCTPAVVAVIISTSTTGLRSKSSNVAKYSRANGTFPKWGSSRNLS--IR 82

Query: 568 ATPYHQQVNDSGSIDSPLMQSMHNKIKEQLNADVVVVEDANGDGRHVRINVISTAFEGQS 389
           AT    QVN+SGSIDSPLMQSM NKIKEQL+A  V V+DA GDGRHV I+V+S+AFEGQ+
Sbjct: 83  AT----QVNESGSIDSPLMQSMENKIKEQLDAQSVSVKDAYGDGRHVSIDVVSSAFEGQT 138

Query: 388 AVNRQRMVYKAISEELQSVVHAVDQMITKTPAEA 287
           AVNRQRMVYKAI EELQS VHAVDQM T+TPAEA
Sbjct: 139 AVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEA 172


>gb|AFK38583.1| unknown [Lotus japonicus]
          Length = 171

 Score =  141 bits (355), Expect = 3e-31
 Identities = 75/105 (71%), Positives = 86/105 (81%)
 Frame = -1

Query: 595 VRRMSSSVRATPYHQQVNDSGSIDSPLMQSMHNKIKEQLNADVVVVEDANGDGRHVRINV 416
           +R+ SS  RAT     +ND+GS+D PLMQSM  KIKEQLNAD V+V+DA GDGRHV I+V
Sbjct: 69  IRKFSS--RAT----NINDAGSVDLPLMQSMEKKIKEQLNADSVIVKDAYGDGRHVSIDV 122

Query: 415 ISTAFEGQSAVNRQRMVYKAISEELQSVVHAVDQMITKTPAEAEE 281
           +STAFEGQSAVNRQR+VYKAI EELQS VHAVDQM T TPAEA +
Sbjct: 123 VSTAFEGQSAVNRQRLVYKAIWEELQSTVHAVDQMTTSTPAEAAQ 167


>gb|AFK37245.1| unknown [Medicago truncatula]
          Length = 163

 Score =  139 bits (350), Expect = 1e-30
 Identities = 73/100 (73%), Positives = 82/100 (82%)
 Frame = -1

Query: 586 MSSSVRATPYHQQVNDSGSIDSPLMQSMHNKIKEQLNADVVVVEDANGDGRHVRINVIST 407
           +SS  + T     VND+GSID P++QSM  KIKEQLNA+ V V+DA GDGRHV I+V+ST
Sbjct: 60  VSSIRKFTSRATNVNDAGSIDLPIIQSMQQKIKEQLNAEAVSVKDAYGDGRHVSIDVVST 119

Query: 406 AFEGQSAVNRQRMVYKAISEELQSVVHAVDQMITKTPAEA 287
           AFEGQSAVNRQRMVYKAI EELQS VHAVDQM TKTPAEA
Sbjct: 120 AFEGQSAVNRQRMVYKAIWEELQSAVHAVDQMTTKTPAEA 159


>gb|ABK23160.1| unknown [Picea sitchensis]
          Length = 173

 Score =  139 bits (349), Expect = 1e-30
 Identities = 69/90 (76%), Positives = 80/90 (88%)
 Frame = -1

Query: 550 QVNDSGSIDSPLMQSMHNKIKEQLNADVVVVEDANGDGRHVRINVISTAFEGQSAVNRQR 371
           +V+DSGS+DSP+MQ+M NKIKEQLNAD V+V+DA GDGRHV I+VIS+AFEGQS VNRQR
Sbjct: 80  EVSDSGSMDSPMMQAMQNKIKEQLNADEVIVKDAYGDGRHVSIDVISSAFEGQSHVNRQR 139

Query: 370 MVYKAISEELQSVVHAVDQMITKTPAEAEE 281
           MVYKAI EELQ+ VHAVDQM TKTPAE  +
Sbjct: 140 MVYKAIWEELQNTVHAVDQMTTKTPAEVAQ 169


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