BLASTX nr result

ID: Coptis25_contig00003589 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003589
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36410.1| unknown [Lotus japonicus]                              112   4e-23
emb|CBI30152.3| unnamed protein product [Vitis vinifera]              112   4e-23
ref|XP_002268987.1| PREDICTED: uncharacterized protein LOC100247...   110   1e-22
ref|XP_003537301.1| PREDICTED: uncharacterized protein LOC100804...   108   6e-22
gb|AFK37573.1| unknown [Lotus japonicus]                              107   1e-21

>gb|AFK36410.1| unknown [Lotus japonicus]
          Length = 83

 Score =  112 bits (279), Expect = 4e-23
 Identities = 48/74 (64%), Positives = 60/74 (81%), Gaps = 2/74 (2%)
 Frame = -2

Query: 457 MVCIACLLPLFLVPIVNVLPLLFDFILAKLYRAFGWEYRKPERVPPACPMKPASQ--TNN 284
           MVC+ACLLPLFLVPI+N+LPLLFDF++AK+YR FGWEYRKPER PPACP KP++   +  
Sbjct: 1   MVCVACLLPLFLVPIINLLPLLFDFLMAKIYRVFGWEYRKPERAPPACPYKPSANGVSKQ 60

Query: 283 TKVNQEPAAPSLIQ 242
            + N EPA P  ++
Sbjct: 61  AEANAEPATPEPVK 74


>emb|CBI30152.3| unnamed protein product [Vitis vinifera]
          Length = 125

 Score =  112 bits (279), Expect = 4e-23
 Identities = 53/91 (58%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
 Frame = -2

Query: 478 KQSQKQNMVCIACLLPLFLVPIVNVLPLLFDFILAKLYRAFGWEYRKPERVPPACPMKPA 299
           +  ++  MVC+ACLLPLFLVPIVN+LPLLF+ I+AK+Y  FGWEYRKPERVP ACP KPA
Sbjct: 35  QSKRRSKMVCLACLLPLFLVPIVNLLPLLFNLIMAKVYGLFGWEYRKPERVPAACPYKPA 94

Query: 298 SQTNN-TKVNQEPAAPSLIQKTGSVDDDKQD 209
           +  N+   V  EP AP  + K   V++ K D
Sbjct: 95  ANNNSKVGVETEPGAPEPVLKPVGVENSKCD 125


>ref|XP_002268987.1| PREDICTED: uncharacterized protein LOC100247006 [Vitis vinifera]
          Length = 84

 Score =  110 bits (275), Expect = 1e-22
 Identities = 53/84 (63%), Positives = 63/84 (75%), Gaps = 1/84 (1%)
 Frame = -2

Query: 457 MVCIACLLPLFLVPIVNVLPLLFDFILAKLYRAFGWEYRKPERVPPACPMKPASQTNN-T 281
           MVC+ACLLPLFLVPIVN+LPLLF+ I+AK+Y  FGWEYRKPERVP ACP KPA+  N+  
Sbjct: 1   MVCLACLLPLFLVPIVNLLPLLFNLIMAKVYGLFGWEYRKPERVPAACPYKPAANNNSKV 60

Query: 280 KVNQEPAAPSLIQKTGSVDDDKQD 209
            V  EP AP  + K   V++ K D
Sbjct: 61  GVETEPGAPEPVLKPVGVENSKCD 84


>ref|XP_003537301.1| PREDICTED: uncharacterized protein LOC100804493 [Glycine max]
          Length = 82

 Score =  108 bits (269), Expect = 6e-22
 Identities = 54/84 (64%), Positives = 65/84 (77%), Gaps = 1/84 (1%)
 Frame = -2

Query: 457 MVCIACLLPLFLVPIVNVLPLLFDFILAKLYRAFGWEYRKPERVPPACPMK-PASQTNNT 281
           MVC+ACLLPLFLVPIVN+LPLLF FI+ K+YR FGWEYRKPER PPACP K PA++ +  
Sbjct: 1   MVCLACLLPLFLVPIVNILPLLFHFIMGKIYRVFGWEYRKPERAPPACPFKPPANRVSEA 60

Query: 280 KVNQEPAAPSLIQKTGSVDDDKQD 209
           + + EP  P+   K G+V D KQD
Sbjct: 61  EADVEP-VPADPVKPGNV-DVKQD 82


>gb|AFK37573.1| unknown [Lotus japonicus]
          Length = 83

 Score =  107 bits (267), Expect = 1e-21
 Identities = 47/74 (63%), Positives = 59/74 (79%), Gaps = 2/74 (2%)
 Frame = -2

Query: 457 MVCIACLLPLFLVPIVNVLPLLFDFILAKLYRAFGWEYRKPERVPPACPMKPASQ--TNN 284
           MVC+ACLLPLFLVPI+N+LPLLFDF++AK+YR FGWEYRKPER PPA P KP++   +  
Sbjct: 1   MVCVACLLPLFLVPIINLLPLLFDFLMAKIYRVFGWEYRKPERAPPARPYKPSANGASKQ 60

Query: 283 TKVNQEPAAPSLIQ 242
            + N EPA P  ++
Sbjct: 61  AEANAEPATPEPVK 74


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