BLASTX nr result

ID: Coptis25_contig00003588 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003588
         (1342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272420.1| PREDICTED: WUSCHEL-related homeobox 8 [Vitis...   371   e-100
emb|CAN84082.1| hypothetical protein VITISV_018997 [Vitis vinifera]   360   6e-97
ref|XP_002279942.1| PREDICTED: WUSCHEL-related homeobox 13-like ...   335   2e-89
ref|XP_002272863.1| PREDICTED: WUSCHEL-related homeobox 13-like ...   333   8e-89
emb|CBI37641.3| unnamed protein product [Vitis vinifera]              329   1e-87

>ref|XP_002272420.1| PREDICTED: WUSCHEL-related homeobox 8 [Vitis vinifera]
            gi|297745565|emb|CBI40730.3| unnamed protein product
            [Vitis vinifera]
          Length = 279

 Score =  371 bits (953), Expect = e-100
 Identities = 183/247 (74%), Positives = 210/247 (85%), Gaps = 1/247 (0%)
 Frame = -1

Query: 1102 GMMYVKVMTDEQMELLRKQISIYATICEQLVEMHKSITSQQDFAGMRLGNVYYDPLTTSA 923
            G +YVKVMTDEQMELLR+QIS+YATICEQLVEMHK+IT+QQD AGMRLGN+Y DPL  SA
Sbjct: 30   GGLYVKVMTDEQMELLRRQISVYATICEQLVEMHKAITTQQDLAGMRLGNIYCDPLMASA 89

Query: 922  GHKISTRQRWTPTPMQLQILEHIFDQGTGTPSKQKIKDITNELTQHGPISETNVYNWFQN 743
            GHKIS+RQRWTPTP+QLQILE IFDQG GTPSKQKIK+IT ELTQHG ISETNVYNWFQN
Sbjct: 90   GHKISSRQRWTPTPVQLQILERIFDQGNGTPSKQKIKEITTELTQHGQISETNVYNWFQN 149

Query: 742  RRARSKRKQTGVGPNNAESEVETEVESPKEKKAKPENILSNENHALGENEVCFQSSEIGS 563
            RRARSKRKQ+   PNNA+SEVET+VESPKEKK KP+NI S+EN ALG   + FQS E+GS
Sbjct: 150  RRARSKRKQSVPLPNNADSEVETDVESPKEKKTKPDNIQSHENSALGTENIYFQSPEMGS 209

Query: 562  ELHSLDQQHEKGENTFPSDGCPRSSGSLGHISFYDTLLSNPRIDHLLGKMEVPGSYNGYH 383
            E+H LD Q  KGE  FPSD   RSSGSLGH S Y+T + NPR+D L+GK+EVPGS++ Y 
Sbjct: 210  EMHCLDTQPNKGEPMFPSDRSLRSSGSLGHSSLYETGVPNPRMDQLIGKVEVPGSFSPYR 269

Query: 382  Q-GDGYE 365
            Q G+G++
Sbjct: 270  QGGEGFD 276


>emb|CAN84082.1| hypothetical protein VITISV_018997 [Vitis vinifera]
          Length = 243

 Score =  360 bits (923), Expect = 6e-97
 Identities = 177/240 (73%), Positives = 203/240 (84%), Gaps = 1/240 (0%)
 Frame = -1

Query: 1081 MTDEQMELLRKQISIYATICEQLVEMHKSITSQQDFAGMRLGNVYYDPLTTSAGHKISTR 902
            MTDEQMELLR+QIS+YATICEQLVEMHK+IT+QQD AGMRLGN+Y DPL  SAGHKIS+R
Sbjct: 1    MTDEQMELLRRQISVYATICEQLVEMHKAITTQQDLAGMRLGNIYCDPLMASAGHKISSR 60

Query: 901  QRWTPTPMQLQILEHIFDQGTGTPSKQKIKDITNELTQHGPISETNVYNWFQNRRARSKR 722
            QRWTPTP+QLQILE IFDQG GTPSKQKIK+IT ELTQHG ISETNVYNWFQNRRARSKR
Sbjct: 61   QRWTPTPVQLQILERIFDQGNGTPSKQKIKEITTELTQHGQISETNVYNWFQNRRARSKR 120

Query: 721  KQTGVGPNNAESEVETEVESPKEKKAKPENILSNENHALGENEVCFQSSEIGSELHSLDQ 542
            KQ+   PNNA+SEVET+VESPKEKK KP+NI S+EN ALG   + FQS E+GSE+H LD 
Sbjct: 121  KQSVPLPNNADSEVETDVESPKEKKTKPDNIQSHENSALGTENIYFQSPEMGSEMHCLDT 180

Query: 541  QHEKGENTFPSDGCPRSSGSLGHISFYDTLLSNPRIDHLLGKMEVPGSYNGYHQ-GDGYE 365
            Q  KGE  FPSD   RSSGSLGH S Y+  + NPR+D L+GK+EVPGS++ Y Q G+G++
Sbjct: 181  QPNKGEPMFPSDHSLRSSGSLGHSSLYEAGVPNPRMDQLIGKVEVPGSFSPYRQGGEGFD 240


>ref|XP_002279942.1| PREDICTED: WUSCHEL-related homeobox 13-like isoform 1 [Vitis
            vinifera]
          Length = 281

 Score =  335 bits (859), Expect = 2e-89
 Identities = 166/245 (67%), Positives = 193/245 (78%)
 Frame = -1

Query: 1102 GMMYVKVMTDEQMELLRKQISIYATICEQLVEMHKSITSQQDFAGMRLGNVYYDPLTTSA 923
            G++Y+KVMTD QME+LRKQIS+YATICEQLVEMHKS+TS QD AG+RLGN+Y DPL TS 
Sbjct: 39   GVLYMKVMTDAQMEILRKQISVYATICEQLVEMHKSLTSHQDLAGVRLGNLYCDPLMTST 98

Query: 922  GHKISTRQRWTPTPMQLQILEHIFDQGTGTPSKQKIKDITNELTQHGPISETNVYNWFQN 743
            GHKI+ RQRWTPTP+QLQILE IFDQG GTPSKQKIK+IT++L+QHG ISETNVYNWFQN
Sbjct: 99   GHKITARQRWTPTPVQLQILERIFDQGYGTPSKQKIKEITSDLSQHGQISETNVYNWFQN 158

Query: 742  RRARSKRKQTGVGPNNAESEVETEVESPKEKKAKPENILSNENHALGENEVCFQSSEIGS 563
            RRARSKRKQ    PNNA+SEVETEVESPK+KK K EN L  +N A    ++CFQ+ E+GS
Sbjct: 159  RRARSKRKQLVTAPNNADSEVETEVESPKDKKTKSENFLPQQNSASRPEDLCFQNPELGS 218

Query: 562  ELHSLDQQHEKGENTFPSDGCPRSSGSLGHISFYDTLLSNPRIDHLLGKMEVPGSYNGYH 383
             L  LDQQ  K E  FPSDG  + SG+L  ++FY         DH +GKMEVPGSYN Y 
Sbjct: 219  RLDFLDQQTHKEEAIFPSDGGIKPSGNLSPVAFY------AGNDHQIGKMEVPGSYNPYQ 272

Query: 382  QGDGY 368
            Q + Y
Sbjct: 273  QTEDY 277


>ref|XP_002272863.1| PREDICTED: WUSCHEL-related homeobox 13-like [Vitis vinifera]
          Length = 276

 Score =  333 bits (853), Expect = 8e-89
 Identities = 166/245 (67%), Positives = 191/245 (77%)
 Frame = -1

Query: 1102 GMMYVKVMTDEQMELLRKQISIYATICEQLVEMHKSITSQQDFAGMRLGNVYYDPLTTSA 923
            G+ YVKVMTD Q+E+LRKQIS+YATICEQLVEMHKS+TS QD AG+RLGN+Y DPL TS 
Sbjct: 34   GVFYVKVMTDAQVEILRKQISVYATICEQLVEMHKSLTSHQDLAGVRLGNLYCDPLMTST 93

Query: 922  GHKISTRQRWTPTPMQLQILEHIFDQGTGTPSKQKIKDITNELTQHGPISETNVYNWFQN 743
            GHKIS RQRWTPTP+QLQILE IFDQG GTPSKQKIK+IT++L+QHG ISETNVYNWFQN
Sbjct: 94   GHKISARQRWTPTPVQLQILERIFDQGYGTPSKQKIKEITSDLSQHGQISETNVYNWFQN 153

Query: 742  RRARSKRKQTGVGPNNAESEVETEVESPKEKKAKPENILSNENHALGENEVCFQSSEIGS 563
            RRA+SKRKQ    PNNAESEV TEVESPK++K K EN L  +N A    ++CFQ+ EIGS
Sbjct: 154  RRAQSKRKQLITMPNNAESEVATEVESPKDQKTKSENFLPQQNSASRPEDLCFQNPEIGS 213

Query: 562  ELHSLDQQHEKGENTFPSDGCPRSSGSLGHISFYDTLLSNPRIDHLLGKMEVPGSYNGYH 383
             LH LDQQ  K EN FPSDG  + SG+   ++FY         DH +GKMEVPGSYN Y 
Sbjct: 214  RLHFLDQQTHKEENIFPSDGGIKPSGNPSQVAFY------AGNDHQIGKMEVPGSYNPYQ 267

Query: 382  QGDGY 368
              + Y
Sbjct: 268  HTEDY 272


>emb|CBI37641.3| unnamed protein product [Vitis vinifera]
          Length = 239

 Score =  329 bits (843), Expect = 1e-87
 Identities = 164/241 (68%), Positives = 189/241 (78%)
 Frame = -1

Query: 1090 VKVMTDEQMELLRKQISIYATICEQLVEMHKSITSQQDFAGMRLGNVYYDPLTTSAGHKI 911
            +KVMTD QME+LRKQIS+YATICEQLVEMHKS+TS QD AG+RLGN+Y DPL TS GHKI
Sbjct: 1    MKVMTDAQMEILRKQISVYATICEQLVEMHKSLTSHQDLAGVRLGNLYCDPLMTSTGHKI 60

Query: 910  STRQRWTPTPMQLQILEHIFDQGTGTPSKQKIKDITNELTQHGPISETNVYNWFQNRRAR 731
            + RQRWTPTP+QLQILE IFDQG GTPSKQKIK+IT++L+QHG ISETNVYNWFQNRRAR
Sbjct: 61   TARQRWTPTPVQLQILERIFDQGYGTPSKQKIKEITSDLSQHGQISETNVYNWFQNRRAR 120

Query: 730  SKRKQTGVGPNNAESEVETEVESPKEKKAKPENILSNENHALGENEVCFQSSEIGSELHS 551
            SKRKQ    PNNA+SEVETEVESPK+KK K EN L  +N A    ++CFQ+ E+GS L  
Sbjct: 121  SKRKQLVTAPNNADSEVETEVESPKDKKTKSENFLPQQNSASRPEDLCFQNPELGSRLDF 180

Query: 550  LDQQHEKGENTFPSDGCPRSSGSLGHISFYDTLLSNPRIDHLLGKMEVPGSYNGYHQGDG 371
            LDQQ  K E  FPSDG  + SG+L  ++FY         DH +GKMEVPGSYN Y Q + 
Sbjct: 181  LDQQTHKEEAIFPSDGGIKPSGNLSPVAFY------AGNDHQIGKMEVPGSYNPYQQTED 234

Query: 370  Y 368
            Y
Sbjct: 235  Y 235


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