BLASTX nr result

ID: Coptis25_contig00003581 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003581
         (212 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279652.2| PREDICTED: probable receptor-like protein ki...   107   8e-22
emb|CAN69599.1| hypothetical protein VITISV_039936 [Vitis vinifera]   107   8e-22
emb|CAN76446.1| hypothetical protein VITISV_010117 [Vitis vinifera]   106   2e-21
ref|XP_002277015.2| PREDICTED: uncharacterized protein LOC100261...   102   2e-20
emb|CBI15488.3| unnamed protein product [Vitis vinifera]              102   2e-20

>ref|XP_002279652.2| PREDICTED: probable receptor-like protein kinase At1g67000-like
           [Vitis vinifera]
          Length = 637

 Score =  107 bits (268), Expect = 8e-22
 Identities = 48/72 (66%), Positives = 62/72 (86%), Gaps = 2/72 (2%)
 Frame = -2

Query: 211 VYSYGMMVLEIVGRRKNLNEGVNHSSEMYFPHWIYKSLELDED--IHGNMSKEEGEITRK 38
           VYSYGMMVLE+VG RKN+++G+NH+SE+YFPHWIYK LELDE+  + G M++EE    RK
Sbjct: 521 VYSYGMMVLEMVGGRKNIDDGINHTSEIYFPHWIYKRLELDEELGLQGFMNEEERTSARK 580

Query: 37  MVLVALWCIQTN 2
           M++V+LWCIQTN
Sbjct: 581 MIIVSLWCIQTN 592


>emb|CAN69599.1| hypothetical protein VITISV_039936 [Vitis vinifera]
          Length = 624

 Score =  107 bits (268), Expect = 8e-22
 Identities = 48/72 (66%), Positives = 62/72 (86%), Gaps = 2/72 (2%)
 Frame = -2

Query: 211 VYSYGMMVLEIVGRRKNLNEGVNHSSEMYFPHWIYKSLELDED--IHGNMSKEEGEITRK 38
           VYSYGMMVLE+VG RKN+++G+NH+SE+YFPHWIYK LELDE+  + G M++EE    RK
Sbjct: 508 VYSYGMMVLEMVGGRKNIDDGINHTSEIYFPHWIYKRLELDEELGLQGFMNEEERTSARK 567

Query: 37  MVLVALWCIQTN 2
           M++V+LWCIQTN
Sbjct: 568 MIIVSLWCIQTN 579


>emb|CAN76446.1| hypothetical protein VITISV_010117 [Vitis vinifera]
          Length = 1001

 Score =  106 bits (265), Expect = 2e-21
 Identities = 48/72 (66%), Positives = 61/72 (84%), Gaps = 2/72 (2%)
 Frame = -2

Query: 211  VYSYGMMVLEIVGRRKNLNEGVNHSSEMYFPHWIYKSLELDED--IHGNMSKEEGEITRK 38
            VYSYGMMVLE+VG RKN ++G+NH+SE+YFPHWIYK LELDE+  + G M++EE    RK
Sbjct: 885  VYSYGMMVLEMVGGRKNTDDGINHTSEIYFPHWIYKRLELDEELGLQGFMNEEERTSARK 944

Query: 37   MVLVALWCIQTN 2
            M++V+LWCIQTN
Sbjct: 945  MIIVSLWCIQTN 956


>ref|XP_002277015.2| PREDICTED: uncharacterized protein LOC100261246 [Vitis vinifera]
          Length = 1963

 Score =  102 bits (255), Expect = 2e-20
 Identities = 49/72 (68%), Positives = 57/72 (79%), Gaps = 2/72 (2%)
 Frame = -2

Query: 211  VYSYGMMVLEIVGRRKNLNEGVNHSSEMYFPHWIYKSLELDED--IHGNMSKEEGEITRK 38
            VYSYGMMVLE+VG R+N+N  V H+SE YFPHWIYK LE  ED  + G  +KEE EITRK
Sbjct: 1844 VYSYGMMVLEMVGGRQNVNGTVGHTSETYFPHWIYKHLEQQEDLGLEGIENKEENEITRK 1903

Query: 37   MVLVALWCIQTN 2
            M++V LWCIQTN
Sbjct: 1904 MIVVGLWCIQTN 1915


>emb|CBI15488.3| unnamed protein product [Vitis vinifera]
          Length = 667

 Score =  102 bits (255), Expect = 2e-20
 Identities = 49/72 (68%), Positives = 57/72 (79%), Gaps = 2/72 (2%)
 Frame = -2

Query: 211 VYSYGMMVLEIVGRRKNLNEGVNHSSEMYFPHWIYKSLELDED--IHGNMSKEEGEITRK 38
           VYSYGMMVLE+VG R+N+N  V H+SE YFPHWIYK LE  ED  + G  +KEE EITRK
Sbjct: 548 VYSYGMMVLEMVGGRQNVNGTVGHTSETYFPHWIYKHLEQQEDLGLEGIENKEENEITRK 607

Query: 37  MVLVALWCIQTN 2
           M++V LWCIQTN
Sbjct: 608 MIVVGLWCIQTN 619


Top