BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003578
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29964.3| unnamed protein product [Vitis vinifera]              157   9e-37
ref|XP_002276675.1| PREDICTED: pre-mRNA-splicing factor rse1-lik...   149   2e-34
ref|XP_004136549.1| PREDICTED: pre-mRNA-splicing factor RSE1-lik...   140   1e-31
ref|XP_002531586.1| spliceosomal protein sap, putative [Ricinus ...   132   2e-29
ref|XP_003553635.1| PREDICTED: uncharacterized protein LOC100799...   132   4e-29

>emb|CBI29964.3| unnamed protein product [Vitis vinifera]
          Length = 1363

 Score =  157 bits (397), Expect = 9e-37
 Identities = 74/107 (69%), Positives = 93/107 (86%)
 Frame = -3

Query: 356  QRLVADCALMDMDTAVVSDWRGNIIVLSCTTHLEENASPESNLTLSCSYYIGETVTSIRK 177
            QRLVADC LMD+DTAVVSD +G+I VLSC+ HLE+NASPE NLTL+CSYY+GE   SI+K
Sbjct: 1152 QRLVADCILMDVDTAVVSDRKGSIAVLSCSNHLEDNASPECNLTLNCSYYMGEIAMSIKK 1211

Query: 176  GSFSYKLPVDDVVKSCDGADKSLESAQNSIVASTLLGSVMILIPISR 36
            GSFSYKLP DDV+K CDG++  ++ ++NSI+A TLLGS+++LIPISR
Sbjct: 1212 GSFSYKLPADDVLKGCDGSNTIIDFSENSIMAGTLLGSIIMLIPISR 1258


>ref|XP_002276675.1| PREDICTED: pre-mRNA-splicing factor rse1-like [Vitis vinifera]
          Length = 1387

 Score =  149 bits (376), Expect = 2e-34
 Identities = 75/120 (62%), Positives = 93/120 (77%), Gaps = 13/120 (10%)
 Frame = -3

Query: 356  QRLVADCALMDMDTAVVSDWRGNIIVLSCTTHLEE-------------NASPESNLTLSC 216
            QRLVADC LMD+DTAVVSD +G+I VLSC+ HLEE             NASPE NLTL+C
Sbjct: 1166 QRLVADCILMDVDTAVVSDRKGSIAVLSCSNHLEELHGFKFLIISCPDNASPECNLTLNC 1225

Query: 215  SYYIGETVTSIRKGSFSYKLPVDDVVKSCDGADKSLESAQNSIVASTLLGSVMILIPISR 36
            SYY+GE   SI+KGSFSYKLP DDV+K CDG++  ++ ++NSI+A TLLGS+++LIPISR
Sbjct: 1226 SYYMGEIAMSIKKGSFSYKLPADDVLKGCDGSNTIIDFSENSIMAGTLLGSIIMLIPISR 1285


>ref|XP_004136549.1| PREDICTED: pre-mRNA-splicing factor RSE1-like [Cucumis sativus]
          Length = 1376

 Score =  140 bits (353), Expect = 1e-31
 Identities = 64/107 (59%), Positives = 86/107 (80%)
 Frame = -3

Query: 356  QRLVADCALMDMDTAVVSDWRGNIIVLSCTTHLEENASPESNLTLSCSYYIGETVTSIRK 177
            QRLVADC L+D+DTAVVSD +G+I +LSC+  LE+NASPE NLTL+C+YY+GE   ++RK
Sbjct: 1169 QRLVADCTLLDVDTAVVSDRKGSIAILSCSDRLEDNASPECNLTLNCAYYMGEIAMTLRK 1228

Query: 176  GSFSYKLPVDDVVKSCDGADKSLESAQNSIVASTLLGSVMILIPISR 36
            GSFSYKLP DD+++ C       +S+ N+I+ASTLLGS++I  P+SR
Sbjct: 1229 GSFSYKLPADDLLRGCAVPGSDFDSSHNTIIASTLLGSIVIFTPLSR 1275


>ref|XP_002531586.1| spliceosomal protein sap, putative [Ricinus communis]
            gi|223528782|gb|EEF30789.1| spliceosomal protein sap,
            putative [Ricinus communis]
          Length = 1220

 Score =  132 bits (333), Expect = 2e-29
 Identities = 64/107 (59%), Positives = 84/107 (78%)
 Frame = -3

Query: 356  QRLVADCALMDMDTAVVSDWRGNIIVLSCTTHLEENASPESNLTLSCSYYIGETVTSIRK 177
            QRLVADC L+D+DTAVVSD +G+I VLSC+   E NASPE NLTL+C+YY+GE   SIRK
Sbjct: 1069 QRLVADCILLDVDTAVVSDRKGSIAVLSCSGDSERNASPECNLTLTCAYYMGEIAMSIRK 1128

Query: 176  GSFSYKLPVDDVVKSCDGADKSLESAQNSIVASTLLGSVMILIPISR 36
            GSFSY+LP DD++   D    +  ++ N+I+ASTLLGS++I IP++R
Sbjct: 1129 GSFSYRLPADDMLMGYDAVTPNNYASHNTIMASTLLGSIIIFIPLTR 1175


>ref|XP_003553635.1| PREDICTED: uncharacterized protein LOC100799711 [Glycine max]
          Length = 1258

 Score =  132 bits (331), Expect = 4e-29
 Identities = 63/107 (58%), Positives = 86/107 (80%)
 Frame = -3

Query: 356  QRLVADCALMDMDTAVVSDWRGNIIVLSCTTHLEENASPESNLTLSCSYYIGETVTSIRK 177
            QR+VADC LMD DTAVVSD +G+I VL C+ HLE+NA  + N+TLSC+Y++ E   SI+K
Sbjct: 1053 QRIVADCILMDADTAVVSDRKGSIAVL-CSDHLEDNAGAQCNMTLSCAYFMAEIAMSIKK 1111

Query: 176  GSFSYKLPVDDVVKSCDGADKSLESAQNSIVASTLLGSVMILIPISR 36
            GS+SY+LP DDV++  +G   +++S QN+I+ASTLLGS+MI IP+SR
Sbjct: 1112 GSYSYRLPADDVLEGGNGPKTNVDSLQNTIIASTLLGSIMIFIPLSR 1158