BLASTX nr result

ID: Coptis25_contig00003574 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003574
         (1484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284787.1| PREDICTED: seryl-tRNA synthetase [Vitis vini...   680   0.0  
ref|XP_002514398.1| seryl-tRNA synthetase, putative [Ricinus com...   659   0.0  
ref|XP_002519916.1| seryl-tRNA synthetase, putative [Ricinus com...   649   0.0  
ref|XP_003536082.1| PREDICTED: seryl-tRNA synthetase-like [Glyci...   644   0.0  
ref|XP_002306393.1| predicted protein [Populus trichocarpa] gi|2...   641   0.0  

>ref|XP_002284787.1| PREDICTED: seryl-tRNA synthetase [Vitis vinifera]
            gi|296088317|emb|CBI36762.3| unnamed protein product
            [Vitis vinifera]
          Length = 447

 Score =  680 bits (1755), Expect = 0.0
 Identities = 328/386 (84%), Positives = 358/386 (92%)
 Frame = -2

Query: 1483 EVAKLKISGGDASEKIRDTDDNKRLTAEKEIQVQTAKTDLYARLEIVGNLVHDSVPISND 1304
            +VAKLKISG DASE I+ TD+NKRLT++KE +VQ A   L ++LEI+GNLVHDSVP+SND
Sbjct: 62   QVAKLKISGEDASEMIKSTDENKRLTSKKEAEVQEALAALNSKLEIIGNLVHDSVPVSND 121

Query: 1303 EANNRVERTWGEKRMEPKLKNHVELVELLGIADLKKGANVAGGRGFYLKGAGVLLNQALI 1124
            EANN V R+WGEK++EPKLKNHVELVELLGIADLKKGAN+AGGRGFYLKG GV LNQALI
Sbjct: 122  EANNAVIRSWGEKKVEPKLKNHVELVELLGIADLKKGANIAGGRGFYLKGDGVRLNQALI 181

Query: 1123 NFGLMFLAKRDYTPLQTPFFMRKDIMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQPLC 944
            NFGL FL KR YT LQTPFFMRKDIMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQPLC
Sbjct: 182  NFGLDFLEKRGYTALQTPFFMRKDIMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQPLC 241

Query: 943  AYHIDEWIHPSGLPIRYAGYSTCFRKEAGSHGRDTLGIFRVHQFEKIEQFCITTPDDNKS 764
            AYH+D+WIHPS LP+RYAGYS+CFRKEAGSHGRDTLGIFRVHQFEK+EQFCIT+P+ N S
Sbjct: 242  AYHLDDWIHPSQLPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNGNDS 301

Query: 763  WEMHEEMITNSEDFYKELNIPYQVVSIVSGALNDAAAKKYDLEGWFPASKTYRELVSCSN 584
            W+MHEEMI NSEDFYK LNIPYQVV+IVSGALNDAAAKKYDLEGWFPAS+TYRELVSCSN
Sbjct: 302  WDMHEEMIKNSEDFYKMLNIPYQVVAIVSGALNDAAAKKYDLEGWFPASQTYRELVSCSN 361

Query: 583  CTDYQSRRLEIRYGQKKSNEQVKQYVHLLNSTLTATERTICCILENHQKENGVEIPAALQ 404
            CTDYQSRRLEIRYGQKKSNEQ+KQYVHLLNSTLTATERTICCILEN+QKE+GVE+P  L+
Sbjct: 362  CTDYQSRRLEIRYGQKKSNEQIKQYVHLLNSTLTATERTICCILENYQKEDGVEVPEPLR 421

Query: 403  PFMGGTTFLPFQTSQTTDGKGKKSKA 326
            PFMGG TFLPFQTS  T+ KGKKSKA
Sbjct: 422  PFMGGKTFLPFQTSPATEAKGKKSKA 447


>ref|XP_002514398.1| seryl-tRNA synthetase, putative [Ricinus communis]
            gi|223546495|gb|EEF47994.1| seryl-tRNA synthetase,
            putative [Ricinus communis]
          Length = 447

 Score =  659 bits (1700), Expect = 0.0
 Identities = 321/385 (83%), Positives = 348/385 (90%)
 Frame = -2

Query: 1480 VAKLKISGGDASEKIRDTDDNKRLTAEKEIQVQTAKTDLYARLEIVGNLVHDSVPISNDE 1301
            VAKLKI+G DA+E I+DT++NKRLTAEKE QVQ A   L  +LE VGNLVHDSVP+SNDE
Sbjct: 63   VAKLKIAGEDATEMIKDTNENKRLTAEKEAQVQEAALALNKKLEEVGNLVHDSVPVSNDE 122

Query: 1300 ANNRVERTWGEKRMEPKLKNHVELVELLGIADLKKGANVAGGRGFYLKGAGVLLNQALIN 1121
            ANN V R WGEKR+EPKLKNHV+LVELLGIAD KKGANVAGGRGFYLKG GV LNQALIN
Sbjct: 123  ANNAVIRVWGEKRLEPKLKNHVDLVELLGIADTKKGANVAGGRGFYLKGDGVRLNQALIN 182

Query: 1120 FGLMFLAKRDYTPLQTPFFMRKDIMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQPLCA 941
              L FL KR YT LQTPFFMRKDIMAKCAQLAQFDEELYKVTGEG+DKYLIATAEQPLCA
Sbjct: 183  VALDFLEKRGYTALQTPFFMRKDIMAKCAQLAQFDEELYKVTGEGEDKYLIATAEQPLCA 242

Query: 940  YHIDEWIHPSGLPIRYAGYSTCFRKEAGSHGRDTLGIFRVHQFEKIEQFCITTPDDNKSW 761
            YH+D+WIHPS LPIRYAGYS+CFRKEAGSHGRDTLGIFRVHQFEK+EQFCIT+P+ N SW
Sbjct: 243  YHLDDWIHPSQLPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNGNDSW 302

Query: 760  EMHEEMITNSEDFYKELNIPYQVVSIVSGALNDAAAKKYDLEGWFPASKTYRELVSCSNC 581
            +MHEEMI NSEDFYK LNIPYQVV+IVSGALNDAAAKKYDLE WFPAS TYRELVSCSNC
Sbjct: 303  DMHEEMIKNSEDFYKMLNIPYQVVAIVSGALNDAAAKKYDLEAWFPASNTYRELVSCSNC 362

Query: 580  TDYQSRRLEIRYGQKKSNEQVKQYVHLLNSTLTATERTICCILENHQKENGVEIPAALQP 401
            TDYQSR+LEIRYGQKK+NEQ KQYVHLLNSTLTATERT+CCILEN+QKENGVEIP  L+ 
Sbjct: 363  TDYQSRKLEIRYGQKKNNEQAKQYVHLLNSTLTATERTLCCILENYQKENGVEIPEPLRG 422

Query: 400  FMGGTTFLPFQTSQTTDGKGKKSKA 326
            +MGG +FLPFQ +  T+GKGKKSKA
Sbjct: 423  YMGGKSFLPFQNNPPTEGKGKKSKA 447


>ref|XP_002519916.1| seryl-tRNA synthetase, putative [Ricinus communis]
            gi|223540962|gb|EEF42520.1| seryl-tRNA synthetase,
            putative [Ricinus communis]
          Length = 447

 Score =  649 bits (1674), Expect = 0.0
 Identities = 317/386 (82%), Positives = 345/386 (89%)
 Frame = -2

Query: 1483 EVAKLKISGGDASEKIRDTDDNKRLTAEKEIQVQTAKTDLYARLEIVGNLVHDSVPISND 1304
            +VAKLKI+G DA+E I +T++NKRL+AEKE QVQ A   L  +LE VGNLVHDSVPISND
Sbjct: 62   QVAKLKIAGEDATEMINNTNENKRLSAEKEAQVQEAALALNKKLEQVGNLVHDSVPISND 121

Query: 1303 EANNRVERTWGEKRMEPKLKNHVELVELLGIADLKKGANVAGGRGFYLKGAGVLLNQALI 1124
            EANN V R WGEKR EPKLKNHVELVE LGIAD KKGANVAGGRG+YLKGAGV LNQALI
Sbjct: 122  EANNFVIRVWGEKRWEPKLKNHVELVEFLGIADTKKGANVAGGRGYYLKGAGVRLNQALI 181

Query: 1123 NFGLMFLAKRDYTPLQTPFFMRKDIMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQPLC 944
            NFGL FL KR YT LQTPFFMRKD+MAKCAQLAQFDEELYKVTGEGDDKYLI TAEQPLC
Sbjct: 182  NFGLDFLEKRGYTALQTPFFMRKDVMAKCAQLAQFDEELYKVTGEGDDKYLIGTAEQPLC 241

Query: 943  AYHIDEWIHPSGLPIRYAGYSTCFRKEAGSHGRDTLGIFRVHQFEKIEQFCITTPDDNKS 764
            AYH+D+WIHPS LPIRYAGYS+CF KEAGSHGRDTLGIFRVHQFEK+EQFC T+P+ N S
Sbjct: 242  AYHLDDWIHPSQLPIRYAGYSSCFCKEAGSHGRDTLGIFRVHQFEKVEQFCNTSPNGNDS 301

Query: 763  WEMHEEMITNSEDFYKELNIPYQVVSIVSGALNDAAAKKYDLEGWFPASKTYRELVSCSN 584
            W MHEEMI NSEDFYK LNIPYQVV+IVSGALNDAAAKKYDLE WFPAS+T RELVSCSN
Sbjct: 302  WAMHEEMIKNSEDFYKMLNIPYQVVAIVSGALNDAAAKKYDLEAWFPASETCRELVSCSN 361

Query: 583  CTDYQSRRLEIRYGQKKSNEQVKQYVHLLNSTLTATERTICCILENHQKENGVEIPAALQ 404
            CTDYQSR+LEIRYGQKKSNEQ KQYVHLLNSTLTATERT+CCILEN+QKENG+EIP  L+
Sbjct: 362  CTDYQSRKLEIRYGQKKSNEQAKQYVHLLNSTLTATERTLCCILENYQKENGIEIPEPLR 421

Query: 403  PFMGGTTFLPFQTSQTTDGKGKKSKA 326
             +MGG +FLPFQ + +T+GKGKK KA
Sbjct: 422  VYMGGVSFLPFQNNASTEGKGKKFKA 447


>ref|XP_003536082.1| PREDICTED: seryl-tRNA synthetase-like [Glycine max]
          Length = 447

 Score =  644 bits (1661), Expect = 0.0
 Identities = 309/386 (80%), Positives = 350/386 (90%)
 Frame = -2

Query: 1483 EVAKLKISGGDASEKIRDTDDNKRLTAEKEIQVQTAKTDLYARLEIVGNLVHDSVPISND 1304
            EV+KLK +G DAS+ I ++++ K+  AEKE++V+     L ++LE +GNLVHDSVPISND
Sbjct: 62   EVSKLKRAGEDASKFITESEETKKSIAEKEVEVRETLNLLNSKLETIGNLVHDSVPISND 121

Query: 1303 EANNRVERTWGEKRMEPKLKNHVELVELLGIADLKKGANVAGGRGFYLKGAGVLLNQALI 1124
            EANN V R+WGEKR+EPKLKNHV+LVELLGIAD KKGA+VAGGRGFYLKG GV LNQALI
Sbjct: 122  EANNVVVRSWGEKRVEPKLKNHVDLVELLGIADTKKGADVAGGRGFYLKGDGVRLNQALI 181

Query: 1123 NFGLMFLAKRDYTPLQTPFFMRKDIMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQPLC 944
            NFGL FL KR+YT L TPFFMRKDIM+KCAQLAQFDEELYKVTGEGDDKYLIATAEQPLC
Sbjct: 182  NFGLDFLDKREYTLLHTPFFMRKDIMSKCAQLAQFDEELYKVTGEGDDKYLIATAEQPLC 241

Query: 943  AYHIDEWIHPSGLPIRYAGYSTCFRKEAGSHGRDTLGIFRVHQFEKIEQFCITTPDDNKS 764
            AYH+D+WIHP+ LPIRYAGYS+CFRKEAGSHGRDTLGIFRVHQFEK+EQFC+T+P+DN S
Sbjct: 242  AYHLDDWIHPTQLPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCLTSPNDNDS 301

Query: 763  WEMHEEMITNSEDFYKELNIPYQVVSIVSGALNDAAAKKYDLEGWFPASKTYRELVSCSN 584
            W+MHEEM+ NSEDFYK LN+PYQVVSIVSGALNDAAAKKYDLE WFPAS+ YRELVSCSN
Sbjct: 302  WDMHEEMLKNSEDFYKALNLPYQVVSIVSGALNDAAAKKYDLEAWFPASQAYRELVSCSN 361

Query: 583  CTDYQSRRLEIRYGQKKSNEQVKQYVHLLNSTLTATERTICCILENHQKENGVEIPAALQ 404
            CTDYQ+RRLEIRYGQKKSNEQ+KQYVHLLNSTLTATERTICCILEN+QKE+GVEIP  L+
Sbjct: 362  CTDYQARRLEIRYGQKKSNEQMKQYVHLLNSTLTATERTICCILENNQKEDGVEIPEVLR 421

Query: 403  PFMGGTTFLPFQTSQTTDGKGKKSKA 326
            PFMGG TFLPF++  + + KGKKSKA
Sbjct: 422  PFMGGKTFLPFKSQPSNEAKGKKSKA 447


>ref|XP_002306393.1| predicted protein [Populus trichocarpa] gi|222855842|gb|EEE93389.1|
            predicted protein [Populus trichocarpa]
          Length = 447

 Score =  641 bits (1653), Expect = 0.0
 Identities = 309/386 (80%), Positives = 347/386 (89%)
 Frame = -2

Query: 1483 EVAKLKISGGDASEKIRDTDDNKRLTAEKEIQVQTAKTDLYARLEIVGNLVHDSVPISND 1304
            +VA+LKI+  DA+E IR+T++ K+L A+KE +VQ AK  LY+RL  +GNLVHDSVP++++
Sbjct: 62   KVAQLKIAKEDATEAIRETEETKKLIADKEKEVQEAKDALYSRLPTIGNLVHDSVPVNDN 121

Query: 1303 EANNRVERTWGEKRMEPKLKNHVELVELLGIADLKKGANVAGGRGFYLKGAGVLLNQALI 1124
            E  N V R WGEKR+E KL+NHV+LVELLGIADLKKGA+VAGGRGFYLKG GV LNQALI
Sbjct: 122  EDFNAVIRAWGEKRVEKKLRNHVDLVELLGIADLKKGADVAGGRGFYLKGDGVRLNQALI 181

Query: 1123 NFGLMFLAKRDYTPLQTPFFMRKDIMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQPLC 944
            NFGL FL KR YT LQTPFFMRKD+MAKCAQLAQFDEELYKVTGEGDDKYLIATAEQPLC
Sbjct: 182  NFGLEFLEKRGYTALQTPFFMRKDVMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQPLC 241

Query: 943  AYHIDEWIHPSGLPIRYAGYSTCFRKEAGSHGRDTLGIFRVHQFEKIEQFCITTPDDNKS 764
            AYH+D+WIHPS LPIRYAGYS+CFRKEAG+HGRDTLGIFRVHQFEK+EQFCIT+P+ N S
Sbjct: 242  AYHLDDWIHPSQLPIRYAGYSSCFRKEAGAHGRDTLGIFRVHQFEKVEQFCITSPNGNDS 301

Query: 763  WEMHEEMITNSEDFYKELNIPYQVVSIVSGALNDAAAKKYDLEGWFPASKTYRELVSCSN 584
            WEMHEEMI NSE+FY+ELNIPYQVV+IVSGALNDAAAKKYDLEGWFPAS TYRELVSCSN
Sbjct: 302  WEMHEEMIKNSEEFYQELNIPYQVVAIVSGALNDAAAKKYDLEGWFPASNTYRELVSCSN 361

Query: 583  CTDYQSRRLEIRYGQKKSNEQVKQYVHLLNSTLTATERTICCILENHQKENGVEIPAALQ 404
            CTDYQSRRLEIRYGQKKSNEQVKQY HLLNSTLTATERTICCILEN+QKE+GVE+P  L+
Sbjct: 362  CTDYQSRRLEIRYGQKKSNEQVKQYCHLLNSTLTATERTICCILENYQKEDGVEVPEPLR 421

Query: 403  PFMGGTTFLPFQTSQTTDGKGKKSKA 326
             +M G  FLPFQ   +T+GKGKK KA
Sbjct: 422  KYMSGKEFLPFQNKPSTEGKGKKPKA 447


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