BLASTX nr result

ID: Coptis25_contig00003570 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003570
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA61407.1| TPA: hypothetical protein ZEAMMB73_874948 [Zea m...   106   2e-21
gb|ACG31834.1| peptidyl-prolyl cis-trans isomerase NIMA-interact...   106   2e-21
gb|ACJ86035.1| unknown [Medicago truncatula] gi|388515981|gb|AFK...   105   3e-21
ref|NP_564250.1| peptidyl-prolyl cis-trans isomerase NIMA-intera...   105   4e-21
ref|XP_002893399.1| peptidyl-prolyl cis-trans isomerase PPIC-typ...   105   4e-21

>tpg|DAA61407.1| TPA: hypothetical protein ZEAMMB73_874948 [Zea mays]
           gi|414885394|tpg|DAA61408.1| TPA: hypothetical protein
           ZEAMMB73_874948 [Zea mays]
          Length = 102

 Score =  106 bits (264), Expect = 2e-21
 Identities = 47/49 (95%), Positives = 49/49 (100%)
 Frame = -1

Query: 147 AADGLGTCTYVKARHILCEKQGKINEAYKKLQDGWLNNGDKVPPAEFAK 1
           +ADGLGTCTYVKARH+LCEKQGKINEAYKKLQDGWLNNGDKVPPAEFAK
Sbjct: 42  SADGLGTCTYVKARHVLCEKQGKINEAYKKLQDGWLNNGDKVPPAEFAK 90


>gb|ACG31834.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [Zea mays]
           gi|414885395|tpg|DAA61409.1| TPA: peptidyl-prolyl
           cis-trans isomerase NIMA-interacting 4 isoform 1 [Zea
           mays] gi|414885396|tpg|DAA61410.1| TPA: peptidyl-prolyl
           cis-trans isomerase NIMA-interacting 4 isoform 2 [Zea
           mays] gi|414885397|tpg|DAA61411.1| TPA: peptidyl-prolyl
           cis-trans isomerase NIMA-interacting 4 isoform 3 [Zea
           mays]
          Length = 151

 Score =  106 bits (264), Expect = 2e-21
 Identities = 47/49 (95%), Positives = 49/49 (100%)
 Frame = -1

Query: 147 AADGLGTCTYVKARHILCEKQGKINEAYKKLQDGWLNNGDKVPPAEFAK 1
           +ADGLGTCTYVKARH+LCEKQGKINEAYKKLQDGWLNNGDKVPPAEFAK
Sbjct: 42  SADGLGTCTYVKARHVLCEKQGKINEAYKKLQDGWLNNGDKVPPAEFAK 90


>gb|ACJ86035.1| unknown [Medicago truncatula] gi|388515981|gb|AFK46052.1| unknown
           [Medicago truncatula]
          Length = 144

 Score =  105 bits (263), Expect = 3e-21
 Identities = 48/49 (97%), Positives = 49/49 (100%)
 Frame = -1

Query: 147 AADGLGTCTYVKARHILCEKQGKINEAYKKLQDGWLNNGDKVPPAEFAK 1
           AADGLGTCTYVKARHILCEKQGKINEAYKKLQDGWL+NGDKVPPAEFAK
Sbjct: 35  AADGLGTCTYVKARHILCEKQGKINEAYKKLQDGWLDNGDKVPPAEFAK 83


>ref|NP_564250.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [Arabidopsis
           thaliana] gi|9797744|gb|AAF98562.1|AC013427_5 Contains
           similarity to peptidyl-prolyl cis-trans isomerase EPVH
           from Homo sapiens gb|AF143096 and contains a Rotamase
           (PPIC-type PPIASE) PF|00639 domain. ESTs gb|T45176,
           gb|F14479, gb|AA586142, gb|F14459, gb|AI997648 come from
           this gene [Arabidopsis thaliana]
           gi|12083236|gb|AAG48777.1|AF332414_1 unknown protein
           [Arabidopsis thaliana] gi|21553425|gb|AAM62518.1|
           unknown [Arabidopsis thaliana]
           gi|332192582|gb|AEE30703.1| peptidyl-prolyl cis-trans
           isomerase NIMA-interacting 4 [Arabidopsis thaliana]
          Length = 142

 Score =  105 bits (262), Expect = 4e-21
 Identities = 47/49 (95%), Positives = 49/49 (100%)
 Frame = -1

Query: 147 AADGLGTCTYVKARHILCEKQGKINEAYKKLQDGWLNNGDKVPPAEFAK 1
           AADGLGTCTYVKARH+LCEKQGKINEAYKKLQDGWL+NGDKVPPAEFAK
Sbjct: 33  AADGLGTCTYVKARHVLCEKQGKINEAYKKLQDGWLSNGDKVPPAEFAK 81


>ref|XP_002893399.1| peptidyl-prolyl cis-trans isomerase PPIC-type family protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|297339241|gb|EFH69658.1| peptidyl-prolyl cis-trans
           isomerase PPIC-type family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 142

 Score =  105 bits (262), Expect = 4e-21
 Identities = 47/49 (95%), Positives = 49/49 (100%)
 Frame = -1

Query: 147 AADGLGTCTYVKARHILCEKQGKINEAYKKLQDGWLNNGDKVPPAEFAK 1
           AADGLGTCTYVKARH+LCEKQGKINEAYKKLQDGWL+NGDKVPPAEFAK
Sbjct: 33  AADGLGTCTYVKARHVLCEKQGKINEAYKKLQDGWLSNGDKVPPAEFAK 81


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