BLASTX nr result
ID: Coptis25_contig00003562
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00003562 (1561 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002524567.1| cell cycle regulatory protein, putative [Ric... 481 e-133 ref|XP_002320544.1| predicted protein [Populus trichocarpa] gi|2... 478 e-132 emb|CBI28495.3| unnamed protein product [Vitis vinifera] 473 e-131 ref|XP_002266143.1| PREDICTED: probable E3 ubiquitin-protein lig... 473 e-131 ref|XP_003612038.1| RCC1 and BTB domain-containing protein [Medi... 468 e-129 >ref|XP_002524567.1| cell cycle regulatory protein, putative [Ricinus communis] gi|223536120|gb|EEF37775.1| cell cycle regulatory protein, putative [Ricinus communis] Length = 441 Score = 481 bits (1239), Expect = e-133 Identities = 243/420 (57%), Positives = 302/420 (71%), Gaps = 7/420 (1%) Frame = -3 Query: 1349 IVMSFGDGTHGALGLPTSSIGLGIHAFEPTKIPNLPTNITSIGAGHYHSLALTSHGEVWA 1170 IVMSFGDG+HGALGLP S GLG A+EPT + LP++I + AGHYHSLA+TS G++WA Sbjct: 31 IVMSFGDGSHGALGLPNSLTGLGTDAYEPTIVSGLPSDIVGVTAGHYHSLAVTSTGQLWA 90 Query: 1169 WGRNNEFQLGR---NKGRNENEPEKVHGLXXXXXXXXXXXXXXXXXXXXXXSLWVWGKSK 999 WGRNNE QLGR NEP++V GL SLWVWGKSK Sbjct: 91 WGRNNEAQLGRCIPAPRDTWNEPKRVEGLNKVHILSAYASGVVSAAIANDGSLWVWGKSK 150 Query: 998 RGQLGLGKGVIESALPTKVDALAGEHIVKVAFGWGHALACTEDGKLFGWGYCADGRLGQI 819 RGQLGLGKG+ E+ +P+K++ALAG I KV+FGWGHALA +E+GKLFGWGY ADGRLG+I Sbjct: 151 RGQLGLGKGITEAFVPSKIEALAGTKIAKVSFGWGHALALSEEGKLFGWGYSADGRLGKI 210 Query: 818 REAALQEGEKVLSSPSLTSTATDQLSSSQLHDMAEKIVLEQMEKEEHMPIIWKPCMLQEL 639 A L +L S A Q+ L + +E++VLE MEKE MPI+W PC+++EL Sbjct: 211 MGA--------LEVSALDSNANQQVPKLML-EASERLVLEGMEKENDMPILWDPCLVEEL 261 Query: 638 HGIAVDDVACGDDHSLVLCADGTLLSGGNNTYGQLGRSAEMLGIHPVETNLKTSAISSGL 459 HG V D+ACG DHSLVLC DGTLLS G+N YGQLGR+ +G+ PV+ N+ S+I++GL Sbjct: 262 HGTKVVDIACGLDHSLVLCCDGTLLSSGSNIYGQLGRANHEIGLFPVDLNIHPSSIAAGL 321 Query: 458 GHSLAVCQIPPSGDNG----ISTWGWNSNSQLGRVGLTNIPSLVQGLEGETPVSVSGGRV 291 GHSLA+C+ S G I +WGWN +SQLGR+G IP ++GL GE PVSVSGGRV Sbjct: 322 GHSLAICRAASSDAEGDARNIVSWGWNQSSQLGRLGPEGIPLEIEGLAGEIPVSVSGGRV 381 Query: 290 HSIALTSEGELLVWGCGKNGRLGLGSSANEAEPIMVDYLDGSQVLQAVCGYDHNLVLVAE 111 HSIALTS+GE+ VWGCGKNGRLGLGSS++EAEPI++D L+G +VLQ V G+DHNLVL ++ Sbjct: 382 HSIALTSKGEVWVWGCGKNGRLGLGSSSDEAEPILLDSLEGYEVLQIVSGFDHNLVLASQ 441 >ref|XP_002320544.1| predicted protein [Populus trichocarpa] gi|222861317|gb|EEE98859.1| predicted protein [Populus trichocarpa] Length = 413 Score = 478 bits (1229), Expect = e-132 Identities = 238/420 (56%), Positives = 303/420 (72%), Gaps = 9/420 (2%) Frame = -3 Query: 1343 MSFGDGTHGALGLPTSSIGLGIHAFEPTKIPNLPTNITSIGAGHYHSLALTSHGEVWAWG 1164 MSFGDG+HGALGLPTS IG G+ A+EPT + LP++ITS+ AGHYHSLA+TSHG++WAWG Sbjct: 1 MSFGDGSHGALGLPTSLIGHGMDAYEPTPVTGLPSDITSVSAGHYHSLAVTSHGQLWAWG 60 Query: 1163 RNNEFQLGR---NKGRNENEPEKVHGLXXXXXXXXXXXXXXXXXXXXXXSLWVWGKSKRG 993 RN+E QLGR + NEP++V GL SLWVWGKSKRG Sbjct: 61 RNHEVQLGRGLLSPRDTWNEPKRVEGLDQVQVTAAFASGVVSAAIGDDGSLWVWGKSKRG 120 Query: 992 QLGLGKGVIESALPTKVDALAGEHIVKVAFGWGHALACTEDGKLFGWGYCADGRLGQIRE 813 QLGLGKG+ E+++P+KV+AL G+ I KV+FGWGH LA T +GKLFGWGY ADGRLG++ Sbjct: 121 QLGLGKGITEASVPSKVEALEGQKIAKVSFGWGHTLAQTVEGKLFGWGYLADGRLGKM-- 178 Query: 812 AALQEGEKVLSSP--SLTSTATDQLSSSQLHDMAEKIVLEQMEKEEHMPIIWKPCMLQEL 639 G V +SP S + ++ + ++AE++VLE MEKE+ MPI+W PC ++EL Sbjct: 179 -----GGLVEASPLDSSMNVVKHEVITQSTVEVAERLVLEGMEKEKDMPIVWDPCSVEEL 233 Query: 638 HGIAVDDVACGDDHSLVLCADGTLLSGGNNTYGQLGRSAEMLGIHPVETNLKTSAISSGL 459 G+ V D+ACG DHSLVLC DGTLLS G+N YGQLGR+ +G PV+ + AI+SGL Sbjct: 234 KGVEVVDIACGLDHSLVLCRDGTLLSSGSNVYGQLGRANHDMGFFPVDISFPALAIASGL 293 Query: 458 GHSLAVCQIPPSGDNGIST----WGWNSNSQLGRVGLTNIPSLVQGLEGETPVSVSGGRV 291 GHSLA+CQ G +T WGWN +SQLGR G N+P V+GL GET + VSGGRV Sbjct: 294 GHSLAICQAKSPEGKGDATSIVSWGWNQSSQLGRPGPENVPMEVEGLAGETAILVSGGRV 353 Query: 290 HSIALTSEGELLVWGCGKNGRLGLGSSANEAEPIMVDYLDGSQVLQAVCGYDHNLVLVAE 111 HSIA+TS+GE+ VWGCG+NGRLG+GSS +EAEPIM+D L+G +VLQAV G+DHNL+L+A+ Sbjct: 354 HSIAVTSKGEVWVWGCGRNGRLGIGSSCDEAEPIMLDSLEGCEVLQAVSGFDHNLILIAQ 413 >emb|CBI28495.3| unnamed protein product [Vitis vinifera] Length = 426 Score = 473 bits (1217), Expect = e-131 Identities = 243/418 (58%), Positives = 303/418 (72%), Gaps = 7/418 (1%) Frame = -3 Query: 1346 VMSFGDGTHGALGLPTSSIGLGIHAFEPTKIPNLPTNITSIGAGHYHSLALTSHGEVWAW 1167 VMSFGDG+HGALGLP+S IGLG A+EPT +P LP+++ S+ AGHYHSLA+T+ GEVWAW Sbjct: 17 VMSFGDGSHGALGLPSSLIGLGGDAYEPTPVPGLPSDVCSVSAGHYHSLAVTAQGEVWAW 76 Query: 1166 GRNNEFQLGRN---KGRNENEPEKVHGLXXXXXXXXXXXXXXXXXXXXXXSLWVWGKSKR 996 GRN+E QLGR + N P +V GL SLWVWGKSK Sbjct: 77 GRNHEGQLGRGLLAPRDSWNVPTRVEGLNQVKVRAAFASGVISTAIGDDGSLWVWGKSKH 136 Query: 995 GQLGLGKGVIESALPTKVDALAGEHIVKVAFGWGHALACTEDGKLFGWGYCADGRLGQIR 816 GQLGLGKG+ E+ +P++V+ALA E IVKV+ GWGHALA TEDGKLFGWGY ADGRLGQ+ Sbjct: 137 GQLGLGKGISETVVPSRVEALAREKIVKVSLGWGHALAQTEDGKLFGWGYSADGRLGQVG 196 Query: 815 EAALQEGEKVLSSPSLTSTATDQLSSSQLHDMAEKIVLEQMEKEEHMPIIWKPCMLQELH 636 +A L L S A +LSSS+L ++AE +VL+ +EKE++MPIIW+P +++E + Sbjct: 197 KA--------LEVFPLNSVADRELSSSKL-EVAENMVLKGIEKEKNMPIIWEPSLIEEEN 247 Query: 635 GIAVDDVACGDDHSLVLCADGTLLSGGNNTYGQLGRSAEMLGIHPVETNLKTSAISSGLG 456 G+ + DVACG DHSLVLC +G LLSGG+N YGQLGR A+ G+ PV T+ +ISSGLG Sbjct: 248 GVGIVDVACGLDHSLVLCVNGNLLSGGSNIYGQLGRVAQDYGMVPVTTSFIPISISSGLG 307 Query: 455 HSLAVCQIPPS----GDNGISTWGWNSNSQLGRVGLTNIPSLVQGLEGETPVSVSGGRVH 288 HSLA+CQ+ S G I +WGWN QLGR G + P V+GL GETPV+VSGGR H Sbjct: 308 HSLAICQVESSEAIGGATSIISWGWNQFFQLGRAGPGSCPLAVKGLAGETPVAVSGGRAH 367 Query: 287 SIALTSEGELLVWGCGKNGRLGLGSSANEAEPIMVDYLDGSQVLQAVCGYDHNLVLVA 114 SIALTS+GE+ VWGCGK+GRLGLGSS +E EP +++YL+GS+VLQ G+DHNLVLVA Sbjct: 368 SIALTSKGEVWVWGCGKSGRLGLGSSTDEVEPSLLEYLEGSEVLQVASGFDHNLVLVA 425 >ref|XP_002266143.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Vitis vinifera] Length = 432 Score = 473 bits (1217), Expect = e-131 Identities = 243/418 (58%), Positives = 303/418 (72%), Gaps = 7/418 (1%) Frame = -3 Query: 1346 VMSFGDGTHGALGLPTSSIGLGIHAFEPTKIPNLPTNITSIGAGHYHSLALTSHGEVWAW 1167 VMSFGDG+HGALGLP+S IGLG A+EPT +P LP+++ S+ AGHYHSLA+T+ GEVWAW Sbjct: 23 VMSFGDGSHGALGLPSSLIGLGGDAYEPTPVPGLPSDVCSVSAGHYHSLAVTAQGEVWAW 82 Query: 1166 GRNNEFQLGRN---KGRNENEPEKVHGLXXXXXXXXXXXXXXXXXXXXXXSLWVWGKSKR 996 GRN+E QLGR + N P +V GL SLWVWGKSK Sbjct: 83 GRNHEGQLGRGLLAPRDSWNVPTRVEGLNQVKVRAAFASGVISTAIGDDGSLWVWGKSKH 142 Query: 995 GQLGLGKGVIESALPTKVDALAGEHIVKVAFGWGHALACTEDGKLFGWGYCADGRLGQIR 816 GQLGLGKG+ E+ +P++V+ALA E IVKV+ GWGHALA TEDGKLFGWGY ADGRLGQ+ Sbjct: 143 GQLGLGKGISETVVPSRVEALAREKIVKVSLGWGHALAQTEDGKLFGWGYSADGRLGQVG 202 Query: 815 EAALQEGEKVLSSPSLTSTATDQLSSSQLHDMAEKIVLEQMEKEEHMPIIWKPCMLQELH 636 +A L L S A +LSSS+L ++AE +VL+ +EKE++MPIIW+P +++E + Sbjct: 203 KA--------LEVFPLNSVADRELSSSKL-EVAENMVLKGIEKEKNMPIIWEPSLIEEEN 253 Query: 635 GIAVDDVACGDDHSLVLCADGTLLSGGNNTYGQLGRSAEMLGIHPVETNLKTSAISSGLG 456 G+ + DVACG DHSLVLC +G LLSGG+N YGQLGR A+ G+ PV T+ +ISSGLG Sbjct: 254 GVGIVDVACGLDHSLVLCVNGNLLSGGSNIYGQLGRVAQDYGMVPVTTSFIPISISSGLG 313 Query: 455 HSLAVCQIPPS----GDNGISTWGWNSNSQLGRVGLTNIPSLVQGLEGETPVSVSGGRVH 288 HSLA+CQ+ S G I +WGWN QLGR G + P V+GL GETPV+VSGGR H Sbjct: 314 HSLAICQVESSEAIGGATSIISWGWNQFFQLGRAGPGSCPLAVKGLAGETPVAVSGGRAH 373 Query: 287 SIALTSEGELLVWGCGKNGRLGLGSSANEAEPIMVDYLDGSQVLQAVCGYDHNLVLVA 114 SIALTS+GE+ VWGCGK+GRLGLGSS +E EP +++YL+GS+VLQ G+DHNLVLVA Sbjct: 374 SIALTSKGEVWVWGCGKSGRLGLGSSTDEVEPSLLEYLEGSEVLQVASGFDHNLVLVA 431 >ref|XP_003612038.1| RCC1 and BTB domain-containing protein [Medicago truncatula] gi|355513373|gb|AES94996.1| RCC1 and BTB domain-containing protein [Medicago truncatula] Length = 442 Score = 468 bits (1203), Expect = e-129 Identities = 234/419 (55%), Positives = 296/419 (70%), Gaps = 8/419 (1%) Frame = -3 Query: 1346 VMSFGDGTHGALGLPTSSIGLGIHAFEPTKIPNLPTNITSIGAGHYHSLALTSHGEVWAW 1167 VMSFGDGTHGALGLPT+++G+G HA+EPT IP+LP++I ++ AGHYHSLA TS G +WAW Sbjct: 26 VMSFGDGTHGALGLPTTTVGIGTHAYEPTPIPSLPSDILTVHAGHYHSLATTSQGHLWAW 85 Query: 1166 GRNNEFQLGRNKGRNE--NEPEKVHGLXXXXXXXXXXXXXXXXXXXXXXSLWVWGKSKRG 993 GRNNE QLGR E NEP +V GL S+WVWG SKRG Sbjct: 86 GRNNEAQLGRGLSSRETWNEPRRVEGLEHVNVCGAFASGVVSCCVGDDGSVWVWGMSKRG 145 Query: 992 QLGLGKGVIESALPTKVDALAGEHIVKVAFGWGHALACTEDGKLFGWGYCADGRLGQIRE 813 QLGLGK V E+ +P++V+AL+ +++VKV+FGWGHALA T DGKLFGWGY ADGR+G + Sbjct: 146 QLGLGKHVTEAVVPSRVEALSRQNVVKVSFGWGHALALTVDGKLFGWGYYADGRIGNMGN 205 Query: 812 AALQEGEKVLSSPSLTSTATDQLSSSQLHDMAEKIVLEQMEKEEHMPIIWKPCMLQELHG 633 L+ L S S + Q++SS L ++AEK VL+ M +E +MPIIW+P +++EL G Sbjct: 206 DHLESS--TLDSSSSAFSNNTQITSSDL-EVAEKKVLQGMAEETNMPIIWEPRLVEELRG 262 Query: 632 IAVDDVACGDDHSLVLCADGTLLSGGNNTYGQLGRSAEMLGIHPVETNLKTSAISSGLGH 453 I V D+ACG DHSLVLC DG LLS G+N YGQLGR+ E LG PV+ ++++GLGH Sbjct: 263 IQVVDIACGLDHSLVLCRDGALLSSGSNVYGQLGRAREDLGFFPVDIKFTPVSVAAGLGH 322 Query: 452 SLAVCQIPPSGDN------GISTWGWNSNSQLGRVGLTNIPSLVQGLEGETPVSVSGGRV 291 SLA+CQ+ S N I++WGWN +SQLGR G +P+L+ L GE PVSVS GR Sbjct: 323 SLAICQLDESDSNVTLGTTDIASWGWNQSSQLGRAGPAYLPALIDALAGENPVSVSAGRA 382 Query: 290 HSIALTSEGELLVWGCGKNGRLGLGSSANEAEPIMVDYLDGSQVLQAVCGYDHNLVLVA 114 HS+ALTS+GE+ VWG GKNGRLGL SS +E EP +D L+G Q+LQ V G+DHNLVLVA Sbjct: 383 HSVALTSKGEMWVWGSGKNGRLGLSSSVDEDEPFYLDSLEGFQILQVVSGFDHNLVLVA 441