BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003562
         (1561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524567.1| cell cycle regulatory protein, putative [Ric...   481   e-133
ref|XP_002320544.1| predicted protein [Populus trichocarpa] gi|2...   478   e-132
emb|CBI28495.3| unnamed protein product [Vitis vinifera]              473   e-131
ref|XP_002266143.1| PREDICTED: probable E3 ubiquitin-protein lig...   473   e-131
ref|XP_003612038.1| RCC1 and BTB domain-containing protein [Medi...   468   e-129

>ref|XP_002524567.1| cell cycle regulatory protein, putative [Ricinus communis]
            gi|223536120|gb|EEF37775.1| cell cycle regulatory
            protein, putative [Ricinus communis]
          Length = 441

 Score =  481 bits (1239), Expect = e-133
 Identities = 243/420 (57%), Positives = 302/420 (71%), Gaps = 7/420 (1%)
 Frame = -3

Query: 1349 IVMSFGDGTHGALGLPTSSIGLGIHAFEPTKIPNLPTNITSIGAGHYHSLALTSHGEVWA 1170
            IVMSFGDG+HGALGLP S  GLG  A+EPT +  LP++I  + AGHYHSLA+TS G++WA
Sbjct: 31   IVMSFGDGSHGALGLPNSLTGLGTDAYEPTIVSGLPSDIVGVTAGHYHSLAVTSTGQLWA 90

Query: 1169 WGRNNEFQLGR---NKGRNENEPEKVHGLXXXXXXXXXXXXXXXXXXXXXXSLWVWGKSK 999
            WGRNNE QLGR         NEP++V GL                      SLWVWGKSK
Sbjct: 91   WGRNNEAQLGRCIPAPRDTWNEPKRVEGLNKVHILSAYASGVVSAAIANDGSLWVWGKSK 150

Query: 998  RGQLGLGKGVIESALPTKVDALAGEHIVKVAFGWGHALACTEDGKLFGWGYCADGRLGQI 819
            RGQLGLGKG+ E+ +P+K++ALAG  I KV+FGWGHALA +E+GKLFGWGY ADGRLG+I
Sbjct: 151  RGQLGLGKGITEAFVPSKIEALAGTKIAKVSFGWGHALALSEEGKLFGWGYSADGRLGKI 210

Query: 818  REAALQEGEKVLSSPSLTSTATDQLSSSQLHDMAEKIVLEQMEKEEHMPIIWKPCMLQEL 639
              A        L   +L S A  Q+    L + +E++VLE MEKE  MPI+W PC+++EL
Sbjct: 211  MGA--------LEVSALDSNANQQVPKLML-EASERLVLEGMEKENDMPILWDPCLVEEL 261

Query: 638  HGIAVDDVACGDDHSLVLCADGTLLSGGNNTYGQLGRSAEMLGIHPVETNLKTSAISSGL 459
            HG  V D+ACG DHSLVLC DGTLLS G+N YGQLGR+   +G+ PV+ N+  S+I++GL
Sbjct: 262  HGTKVVDIACGLDHSLVLCCDGTLLSSGSNIYGQLGRANHEIGLFPVDLNIHPSSIAAGL 321

Query: 458  GHSLAVCQIPPSGDNG----ISTWGWNSNSQLGRVGLTNIPSLVQGLEGETPVSVSGGRV 291
            GHSLA+C+   S   G    I +WGWN +SQLGR+G   IP  ++GL GE PVSVSGGRV
Sbjct: 322  GHSLAICRAASSDAEGDARNIVSWGWNQSSQLGRLGPEGIPLEIEGLAGEIPVSVSGGRV 381

Query: 290  HSIALTSEGELLVWGCGKNGRLGLGSSANEAEPIMVDYLDGSQVLQAVCGYDHNLVLVAE 111
            HSIALTS+GE+ VWGCGKNGRLGLGSS++EAEPI++D L+G +VLQ V G+DHNLVL ++
Sbjct: 382  HSIALTSKGEVWVWGCGKNGRLGLGSSSDEAEPILLDSLEGYEVLQIVSGFDHNLVLASQ 441


>ref|XP_002320544.1| predicted protein [Populus trichocarpa] gi|222861317|gb|EEE98859.1|
            predicted protein [Populus trichocarpa]
          Length = 413

 Score =  478 bits (1229), Expect = e-132
 Identities = 238/420 (56%), Positives = 303/420 (72%), Gaps = 9/420 (2%)
 Frame = -3

Query: 1343 MSFGDGTHGALGLPTSSIGLGIHAFEPTKIPNLPTNITSIGAGHYHSLALTSHGEVWAWG 1164
            MSFGDG+HGALGLPTS IG G+ A+EPT +  LP++ITS+ AGHYHSLA+TSHG++WAWG
Sbjct: 1    MSFGDGSHGALGLPTSLIGHGMDAYEPTPVTGLPSDITSVSAGHYHSLAVTSHGQLWAWG 60

Query: 1163 RNNEFQLGR---NKGRNENEPEKVHGLXXXXXXXXXXXXXXXXXXXXXXSLWVWGKSKRG 993
            RN+E QLGR   +     NEP++V GL                      SLWVWGKSKRG
Sbjct: 61   RNHEVQLGRGLLSPRDTWNEPKRVEGLDQVQVTAAFASGVVSAAIGDDGSLWVWGKSKRG 120

Query: 992  QLGLGKGVIESALPTKVDALAGEHIVKVAFGWGHALACTEDGKLFGWGYCADGRLGQIRE 813
            QLGLGKG+ E+++P+KV+AL G+ I KV+FGWGH LA T +GKLFGWGY ADGRLG++  
Sbjct: 121  QLGLGKGITEASVPSKVEALEGQKIAKVSFGWGHTLAQTVEGKLFGWGYLADGRLGKM-- 178

Query: 812  AALQEGEKVLSSP--SLTSTATDQLSSSQLHDMAEKIVLEQMEKEEHMPIIWKPCMLQEL 639
                 G  V +SP  S  +    ++ +    ++AE++VLE MEKE+ MPI+W PC ++EL
Sbjct: 179  -----GGLVEASPLDSSMNVVKHEVITQSTVEVAERLVLEGMEKEKDMPIVWDPCSVEEL 233

Query: 638  HGIAVDDVACGDDHSLVLCADGTLLSGGNNTYGQLGRSAEMLGIHPVETNLKTSAISSGL 459
             G+ V D+ACG DHSLVLC DGTLLS G+N YGQLGR+   +G  PV+ +    AI+SGL
Sbjct: 234  KGVEVVDIACGLDHSLVLCRDGTLLSSGSNVYGQLGRANHDMGFFPVDISFPALAIASGL 293

Query: 458  GHSLAVCQIPPSGDNGIST----WGWNSNSQLGRVGLTNIPSLVQGLEGETPVSVSGGRV 291
            GHSLA+CQ       G +T    WGWN +SQLGR G  N+P  V+GL GET + VSGGRV
Sbjct: 294  GHSLAICQAKSPEGKGDATSIVSWGWNQSSQLGRPGPENVPMEVEGLAGETAILVSGGRV 353

Query: 290  HSIALTSEGELLVWGCGKNGRLGLGSSANEAEPIMVDYLDGSQVLQAVCGYDHNLVLVAE 111
            HSIA+TS+GE+ VWGCG+NGRLG+GSS +EAEPIM+D L+G +VLQAV G+DHNL+L+A+
Sbjct: 354  HSIAVTSKGEVWVWGCGRNGRLGIGSSCDEAEPIMLDSLEGCEVLQAVSGFDHNLILIAQ 413


>emb|CBI28495.3| unnamed protein product [Vitis vinifera]
          Length = 426

 Score =  473 bits (1217), Expect = e-131
 Identities = 243/418 (58%), Positives = 303/418 (72%), Gaps = 7/418 (1%)
 Frame = -3

Query: 1346 VMSFGDGTHGALGLPTSSIGLGIHAFEPTKIPNLPTNITSIGAGHYHSLALTSHGEVWAW 1167
            VMSFGDG+HGALGLP+S IGLG  A+EPT +P LP+++ S+ AGHYHSLA+T+ GEVWAW
Sbjct: 17   VMSFGDGSHGALGLPSSLIGLGGDAYEPTPVPGLPSDVCSVSAGHYHSLAVTAQGEVWAW 76

Query: 1166 GRNNEFQLGRN---KGRNENEPEKVHGLXXXXXXXXXXXXXXXXXXXXXXSLWVWGKSKR 996
            GRN+E QLGR       + N P +V GL                      SLWVWGKSK 
Sbjct: 77   GRNHEGQLGRGLLAPRDSWNVPTRVEGLNQVKVRAAFASGVISTAIGDDGSLWVWGKSKH 136

Query: 995  GQLGLGKGVIESALPTKVDALAGEHIVKVAFGWGHALACTEDGKLFGWGYCADGRLGQIR 816
            GQLGLGKG+ E+ +P++V+ALA E IVKV+ GWGHALA TEDGKLFGWGY ADGRLGQ+ 
Sbjct: 137  GQLGLGKGISETVVPSRVEALAREKIVKVSLGWGHALAQTEDGKLFGWGYSADGRLGQVG 196

Query: 815  EAALQEGEKVLSSPSLTSTATDQLSSSQLHDMAEKIVLEQMEKEEHMPIIWKPCMLQELH 636
            +A        L    L S A  +LSSS+L ++AE +VL+ +EKE++MPIIW+P +++E +
Sbjct: 197  KA--------LEVFPLNSVADRELSSSKL-EVAENMVLKGIEKEKNMPIIWEPSLIEEEN 247

Query: 635  GIAVDDVACGDDHSLVLCADGTLLSGGNNTYGQLGRSAEMLGIHPVETNLKTSAISSGLG 456
            G+ + DVACG DHSLVLC +G LLSGG+N YGQLGR A+  G+ PV T+    +ISSGLG
Sbjct: 248  GVGIVDVACGLDHSLVLCVNGNLLSGGSNIYGQLGRVAQDYGMVPVTTSFIPISISSGLG 307

Query: 455  HSLAVCQIPPS----GDNGISTWGWNSNSQLGRVGLTNIPSLVQGLEGETPVSVSGGRVH 288
            HSLA+CQ+  S    G   I +WGWN   QLGR G  + P  V+GL GETPV+VSGGR H
Sbjct: 308  HSLAICQVESSEAIGGATSIISWGWNQFFQLGRAGPGSCPLAVKGLAGETPVAVSGGRAH 367

Query: 287  SIALTSEGELLVWGCGKNGRLGLGSSANEAEPIMVDYLDGSQVLQAVCGYDHNLVLVA 114
            SIALTS+GE+ VWGCGK+GRLGLGSS +E EP +++YL+GS+VLQ   G+DHNLVLVA
Sbjct: 368  SIALTSKGEVWVWGCGKSGRLGLGSSTDEVEPSLLEYLEGSEVLQVASGFDHNLVLVA 425


>ref|XP_002266143.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Vitis
            vinifera]
          Length = 432

 Score =  473 bits (1217), Expect = e-131
 Identities = 243/418 (58%), Positives = 303/418 (72%), Gaps = 7/418 (1%)
 Frame = -3

Query: 1346 VMSFGDGTHGALGLPTSSIGLGIHAFEPTKIPNLPTNITSIGAGHYHSLALTSHGEVWAW 1167
            VMSFGDG+HGALGLP+S IGLG  A+EPT +P LP+++ S+ AGHYHSLA+T+ GEVWAW
Sbjct: 23   VMSFGDGSHGALGLPSSLIGLGGDAYEPTPVPGLPSDVCSVSAGHYHSLAVTAQGEVWAW 82

Query: 1166 GRNNEFQLGRN---KGRNENEPEKVHGLXXXXXXXXXXXXXXXXXXXXXXSLWVWGKSKR 996
            GRN+E QLGR       + N P +V GL                      SLWVWGKSK 
Sbjct: 83   GRNHEGQLGRGLLAPRDSWNVPTRVEGLNQVKVRAAFASGVISTAIGDDGSLWVWGKSKH 142

Query: 995  GQLGLGKGVIESALPTKVDALAGEHIVKVAFGWGHALACTEDGKLFGWGYCADGRLGQIR 816
            GQLGLGKG+ E+ +P++V+ALA E IVKV+ GWGHALA TEDGKLFGWGY ADGRLGQ+ 
Sbjct: 143  GQLGLGKGISETVVPSRVEALAREKIVKVSLGWGHALAQTEDGKLFGWGYSADGRLGQVG 202

Query: 815  EAALQEGEKVLSSPSLTSTATDQLSSSQLHDMAEKIVLEQMEKEEHMPIIWKPCMLQELH 636
            +A        L    L S A  +LSSS+L ++AE +VL+ +EKE++MPIIW+P +++E +
Sbjct: 203  KA--------LEVFPLNSVADRELSSSKL-EVAENMVLKGIEKEKNMPIIWEPSLIEEEN 253

Query: 635  GIAVDDVACGDDHSLVLCADGTLLSGGNNTYGQLGRSAEMLGIHPVETNLKTSAISSGLG 456
            G+ + DVACG DHSLVLC +G LLSGG+N YGQLGR A+  G+ PV T+    +ISSGLG
Sbjct: 254  GVGIVDVACGLDHSLVLCVNGNLLSGGSNIYGQLGRVAQDYGMVPVTTSFIPISISSGLG 313

Query: 455  HSLAVCQIPPS----GDNGISTWGWNSNSQLGRVGLTNIPSLVQGLEGETPVSVSGGRVH 288
            HSLA+CQ+  S    G   I +WGWN   QLGR G  + P  V+GL GETPV+VSGGR H
Sbjct: 314  HSLAICQVESSEAIGGATSIISWGWNQFFQLGRAGPGSCPLAVKGLAGETPVAVSGGRAH 373

Query: 287  SIALTSEGELLVWGCGKNGRLGLGSSANEAEPIMVDYLDGSQVLQAVCGYDHNLVLVA 114
            SIALTS+GE+ VWGCGK+GRLGLGSS +E EP +++YL+GS+VLQ   G+DHNLVLVA
Sbjct: 374  SIALTSKGEVWVWGCGKSGRLGLGSSTDEVEPSLLEYLEGSEVLQVASGFDHNLVLVA 431


>ref|XP_003612038.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
            gi|355513373|gb|AES94996.1| RCC1 and BTB
            domain-containing protein [Medicago truncatula]
          Length = 442

 Score =  468 bits (1203), Expect = e-129
 Identities = 234/419 (55%), Positives = 296/419 (70%), Gaps = 8/419 (1%)
 Frame = -3

Query: 1346 VMSFGDGTHGALGLPTSSIGLGIHAFEPTKIPNLPTNITSIGAGHYHSLALTSHGEVWAW 1167
            VMSFGDGTHGALGLPT+++G+G HA+EPT IP+LP++I ++ AGHYHSLA TS G +WAW
Sbjct: 26   VMSFGDGTHGALGLPTTTVGIGTHAYEPTPIPSLPSDILTVHAGHYHSLATTSQGHLWAW 85

Query: 1166 GRNNEFQLGRNKGRNE--NEPEKVHGLXXXXXXXXXXXXXXXXXXXXXXSLWVWGKSKRG 993
            GRNNE QLGR     E  NEP +V GL                      S+WVWG SKRG
Sbjct: 86   GRNNEAQLGRGLSSRETWNEPRRVEGLEHVNVCGAFASGVVSCCVGDDGSVWVWGMSKRG 145

Query: 992  QLGLGKGVIESALPTKVDALAGEHIVKVAFGWGHALACTEDGKLFGWGYCADGRLGQIRE 813
            QLGLGK V E+ +P++V+AL+ +++VKV+FGWGHALA T DGKLFGWGY ADGR+G +  
Sbjct: 146  QLGLGKHVTEAVVPSRVEALSRQNVVKVSFGWGHALALTVDGKLFGWGYYADGRIGNMGN 205

Query: 812  AALQEGEKVLSSPSLTSTATDQLSSSQLHDMAEKIVLEQMEKEEHMPIIWKPCMLQELHG 633
              L+     L S S   +   Q++SS L ++AEK VL+ M +E +MPIIW+P +++EL G
Sbjct: 206  DHLESS--TLDSSSSAFSNNTQITSSDL-EVAEKKVLQGMAEETNMPIIWEPRLVEELRG 262

Query: 632  IAVDDVACGDDHSLVLCADGTLLSGGNNTYGQLGRSAEMLGIHPVETNLKTSAISSGLGH 453
            I V D+ACG DHSLVLC DG LLS G+N YGQLGR+ E LG  PV+      ++++GLGH
Sbjct: 263  IQVVDIACGLDHSLVLCRDGALLSSGSNVYGQLGRAREDLGFFPVDIKFTPVSVAAGLGH 322

Query: 452  SLAVCQIPPSGDN------GISTWGWNSNSQLGRVGLTNIPSLVQGLEGETPVSVSGGRV 291
            SLA+CQ+  S  N       I++WGWN +SQLGR G   +P+L+  L GE PVSVS GR 
Sbjct: 323  SLAICQLDESDSNVTLGTTDIASWGWNQSSQLGRAGPAYLPALIDALAGENPVSVSAGRA 382

Query: 290  HSIALTSEGELLVWGCGKNGRLGLGSSANEAEPIMVDYLDGSQVLQAVCGYDHNLVLVA 114
            HS+ALTS+GE+ VWG GKNGRLGL SS +E EP  +D L+G Q+LQ V G+DHNLVLVA
Sbjct: 383  HSVALTSKGEMWVWGSGKNGRLGLSSSVDEDEPFYLDSLEGFQILQVVSGFDHNLVLVA 441