BLASTX nr result

ID: Coptis25_contig00003546 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003546
         (235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635329.1| PREDICTED: cellulose synthase-like protein E...    72   6e-11
ref|XP_003635361.1| PREDICTED: cellulose synthase-like protein E...    71   8e-11
ref|XP_003635328.1| PREDICTED: cellulose synthase-like protein E...    70   1e-10
ref|XP_002274290.1| PREDICTED: cellulose synthase-like protein E...    70   1e-10
ref|XP_003635559.1| PREDICTED: cellulose synthase-like protein E...    69   4e-10

>ref|XP_003635329.1| PREDICTED: cellulose synthase-like protein E6-like [Vitis vinifera]
          Length = 700

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 35/77 (45%), Positives = 49/77 (63%)
 Frame = +3

Query: 3   VSQRYEKDIFEFGNSSPMXXXXXXXXXXXXXXXVGGLNRIIKSRDINDLQSMFLQILLTG 182
           VSQRYE++I EFG+ SPM               V G+ R++    I  L+S+ LQI+L G
Sbjct: 598 VSQRYEQEIMEFGSPSPMFTILATLALLNLFSFVCGIKRVVVDIQIKPLESLALQIILCG 657

Query: 183 IVVILNLPLYWGLFFRK 233
           ++V++NLP+Y GLFFRK
Sbjct: 658 VLVLINLPVYQGLFFRK 674


>ref|XP_003635361.1| PREDICTED: cellulose synthase-like protein E6-like [Vitis vinifera]
          Length = 735

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 35/77 (45%), Positives = 49/77 (63%)
 Frame = +3

Query: 3   VSQRYEKDIFEFGNSSPMXXXXXXXXXXXXXXXVGGLNRIIKSRDINDLQSMFLQILLTG 182
           VSQRYE++I EFG+ SPM               V G+ R++    I  L+S+ LQI+L G
Sbjct: 633 VSQRYEQEIMEFGSPSPMFTISATLALLNLFSFVCGVKRVVVDIQIKPLESLALQIILCG 692

Query: 183 IVVILNLPLYWGLFFRK 233
           ++V++NLP+Y GLFFRK
Sbjct: 693 VLVLINLPVYQGLFFRK 709


>ref|XP_003635328.1| PREDICTED: cellulose synthase-like protein E6-like [Vitis vinifera]
          Length = 735

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/77 (44%), Positives = 49/77 (63%)
 Frame = +3

Query: 3   VSQRYEKDIFEFGNSSPMXXXXXXXXXXXXXXXVGGLNRIIKSRDINDLQSMFLQILLTG 182
           VSQRYE++I EFG+ SP+               V G+ R++    I  L+S+ LQI+L G
Sbjct: 633 VSQRYEQEIMEFGSPSPLFTISATLALLNLFSFVCGVKRVVVDIQIKPLESLVLQIILCG 692

Query: 183 IVVILNLPLYWGLFFRK 233
           ++V++NLP+Y GLFFRK
Sbjct: 693 VLVLINLPVYQGLFFRK 709


>ref|XP_002274290.1| PREDICTED: cellulose synthase-like protein E6-like isoform 1 [Vitis
           vinifera]
          Length = 735

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/77 (44%), Positives = 49/77 (63%)
 Frame = +3

Query: 3   VSQRYEKDIFEFGNSSPMXXXXXXXXXXXXXXXVGGLNRIIKSRDINDLQSMFLQILLTG 182
           VSQRY+++I EFG+ SPM               V G+ R++    I  L+S+ LQI+L G
Sbjct: 633 VSQRYDQEIMEFGSPSPMFTILATLALLNLFSFVCGIKRVVVDIQIKPLESLALQIILCG 692

Query: 183 IVVILNLPLYWGLFFRK 233
           ++V++NLP+Y GLFFRK
Sbjct: 693 VLVLINLPVYQGLFFRK 709


>ref|XP_003635559.1| PREDICTED: cellulose synthase-like protein E6-like [Vitis vinifera]
          Length = 734

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 34/76 (44%), Positives = 47/76 (61%)
 Frame = +3

Query: 6   SQRYEKDIFEFGNSSPMXXXXXXXXXXXXXXXVGGLNRIIKSRDINDLQSMFLQILLTGI 185
           S+R+E++I EFG +SPM               VGG+ R+I       L S+ LQILL G+
Sbjct: 633 SKRFEQEIMEFGAASPMFTILATLALLNLFTFVGGIKRVIIDMQAQVLDSLLLQILLCGV 692

Query: 186 VVILNLPLYWGLFFRK 233
           +V++NLP+Y GLFFRK
Sbjct: 693 LVLMNLPVYHGLFFRK 708


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