BLASTX nr result

ID: Coptis25_contig00003544 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003544
         (1024 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272933.1| PREDICTED: uncharacterized protein At5g43822...   112   2e-22
ref|XP_002510698.1| conserved hypothetical protein [Ricinus comm...   103   7e-20
ref|NP_001065428.1| Os10g0566900 [Oryza sativa Japonica Group] g...   101   3e-19
ref|XP_003574356.1| PREDICTED: uncharacterized protein At5g43822...   101   3e-19
dbj|BAJ99010.1| predicted protein [Hordeum vulgare subsp. vulgare]    100   1e-18

>ref|XP_002272933.1| PREDICTED: uncharacterized protein At5g43822 [Vitis vinifera]
           gi|297745571|emb|CBI40736.3| unnamed protein product
           [Vitis vinifera]
          Length = 198

 Score =  112 bits (279), Expect = 2e-22
 Identities = 54/86 (62%), Positives = 72/86 (83%), Gaps = 2/86 (2%)
 Frame = -2

Query: 741 TFKEL--RIGI*PSIAVCIEGLKVVYEMHESEYLLKLSIVSSLTSKIPPPSAGDVGALRQ 568
           T K+L  RIG+ PS+A C++GL +++EMH+SEYLLK S+VS+L++    PSA D+GAL Q
Sbjct: 113 TMKQLQQRIGVKPSLADCLDGLSLLHEMHQSEYLLKSSVVSALSTLTLKPSASDLGALHQ 172

Query: 567 LLIDQPNIPKEEVRSIFDIIFAEELC 490
           LL+DQPNIPKEEV+ IFDI+FAEE+C
Sbjct: 173 LLVDQPNIPKEEVQFIFDIVFAEEIC 198


>ref|XP_002510698.1| conserved hypothetical protein [Ricinus communis]
           gi|223551399|gb|EEF52885.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 181

 Score =  103 bits (257), Expect = 7e-20
 Identities = 52/99 (52%), Positives = 72/99 (72%), Gaps = 2/99 (2%)
 Frame = -2

Query: 780 GPTSISSGEVAGATFKEL--RIGI*PSIAVCIEGLKVVYEMHESEYLLKLSIVSSLTSKI 607
           G   +  G     T K+L  R+GI P +A C++GL ++ +MH SEYLLK S+VS+L + +
Sbjct: 83  GKQLVQGGGSNHLTAKQLQQRVGIKPCLADCLDGLMILRDMHRSEYLLKSSLVSALPALV 142

Query: 606 PPPSAGDVGALRQLLIDQPNIPKEEVRSIFDIIFAEELC 490
             PS+ D+ AL+QLL+DQPNIP+EEV+ IFDIIFAEE+C
Sbjct: 143 LKPSSSDLAALQQLLVDQPNIPREEVQFIFDIIFAEEIC 181


>ref|NP_001065428.1| Os10g0566900 [Oryza sativa Japonica Group]
           gi|18855001|gb|AAL79693.1|AC087599_12 hypothetical
           protein [Oryza sativa Japonica Group]
           gi|31433571|gb|AAP55069.1| pentatricopeptide, putative,
           expressed [Oryza sativa Japonica Group]
           gi|113639960|dbj|BAF27265.1| Os10g0566900 [Oryza sativa
           Japonica Group] gi|215678750|dbj|BAG95187.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|218185039|gb|EEC67466.1| hypothetical protein
           OsI_34696 [Oryza sativa Indica Group]
           gi|222613293|gb|EEE51425.1| hypothetical protein
           OsJ_32504 [Oryza sativa Japonica Group]
          Length = 194

 Score =  101 bits (252), Expect = 3e-19
 Identities = 48/93 (51%), Positives = 70/93 (75%)
 Frame = -2

Query: 768 ISSGEVAGATFKELRIGI*PSIAVCIEGLKVVYEMHESEYLLKLSIVSSLTSKIPPPSAG 589
           +  G    A   +L++GI P+IA C++GL+ + EMH++EY LK S++SSLT      S+ 
Sbjct: 105 VRGGSALSAKQMQLQVGILPTIADCLDGLRTLCEMHQAEYALKSSVISSLTWT---SSSS 161

Query: 588 DVGALRQLLIDQPNIPKEEVRSIFDIIFAEELC 490
           D+ A+RQLL+DQPNIPK+EV++IFDIIFA+E+C
Sbjct: 162 DIAAMRQLLVDQPNIPKDEVQAIFDIIFADEIC 194


>ref|XP_003574356.1| PREDICTED: uncharacterized protein At5g43822-like [Brachypodium
           distachyon]
          Length = 194

 Score =  101 bits (252), Expect = 3e-19
 Identities = 49/93 (52%), Positives = 70/93 (75%)
 Frame = -2

Query: 768 ISSGEVAGATFKELRIGI*PSIAVCIEGLKVVYEMHESEYLLKLSIVSSLTSKIPPPSAG 589
           +  G    A   +L++GI P+IA C++GL+ + +MH++EY LK S++S LT K    S+ 
Sbjct: 105 VRGGSTLTAKQLQLQVGILPTIAYCLDGLQTLSDMHQAEYALKSSVISLLTWK---SSSS 161

Query: 588 DVGALRQLLIDQPNIPKEEVRSIFDIIFAEELC 490
           D+ ALRQLL+DQPNIPK+EV+SIFDIIFA+E+C
Sbjct: 162 DIAALRQLLVDQPNIPKDEVQSIFDIIFADEIC 194


>dbj|BAJ99010.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 194

 Score = 99.8 bits (247), Expect = 1e-18
 Identities = 48/93 (51%), Positives = 69/93 (74%)
 Frame = -2

Query: 768 ISSGEVAGATFKELRIGI*PSIAVCIEGLKVVYEMHESEYLLKLSIVSSLTSKIPPPSAG 589
           +  G    A   +L++GI P+I  C++GL+ + +MH++EY LK SI+S LT K    S+ 
Sbjct: 105 VRGGSALTAKQLQLKVGILPTITDCLDGLRTLSDMHQAEYALKSSIISLLTWK---SSSS 161

Query: 588 DVGALRQLLIDQPNIPKEEVRSIFDIIFAEELC 490
           D+ A+RQLL+DQPNIPK+EV+SIFDIIFA+E+C
Sbjct: 162 DIAAMRQLLVDQPNIPKDEVQSIFDIIFADEIC 194


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