BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003536
         (1037 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308717.1| f-box family protein [Populus trichocarpa] g...   265   1e-68
emb|CBI38318.3| unnamed protein product [Vitis vinifera]              256   5e-66
ref|XP_002324348.1| predicted protein [Populus trichocarpa] gi|2...   252   9e-65
ref|XP_002513763.1| conserved hypothetical protein [Ricinus comm...   246   9e-63
gb|ACU23045.1| unknown [Glycine max]                                  243   7e-62

>ref|XP_002308717.1| f-box family protein [Populus trichocarpa]
            gi|222854693|gb|EEE92240.1| f-box family protein [Populus
            trichocarpa]
          Length = 292

 Score =  265 bits (678), Expect = 1e-68
 Identities = 141/288 (48%), Positives = 178/288 (61%), Gaps = 18/288 (6%)
 Frame = -3

Query: 1035 EGCVTNIXXXXXXXXXXXXXXXXXXXXSAADSDVIWEKFLPSNYREIVSTSVSNLNLNDF 856
            EGC+ N+                    SA +SD +WE+FLP +Y+ I+ TS S + L+  
Sbjct: 8    EGCIANVLAFTGPRDACRLSIVSSLFKSAGESDAVWERFLPRDYQSIIFTSDSYVLLSSL 67

Query: 855  TTKKELYFRLCDHPIILEGGTKSFQLEKRSGKKCFMLGAKELGIAWGDTPQYWEWKSQPD 676
            ++KKELY RLC+ PII++ G KSF L K+SGKKC+ML A++L I WGDTP YW W S   
Sbjct: 68   SSKKELYLRLCEKPIIIDDGKKSFSLVKKSGKKCYMLSARDLMIVWGDTPTYWRWNSDSS 127

Query: 675  SRFAEVAGLRSVCWLHIQGKIDTQMLSPNTNYAAYLVFKVTDESYGLDNPTTEGSVQFVL 496
            SRF EVA L  VCWL I GKI+  MLSP T YAAYLVFK  + +YGLD    E  V  V 
Sbjct: 128  SRFGEVAELIGVCWLEICGKINATMLSPATLYAAYLVFKPKEGAYGLDYQPVEVGVGLV- 186

Query: 495  GGGNASGYRTVHLDYDSNRAPHR---------RHRRSSV---------TQYVGQLPNARG 370
              G+ +G R V+LD    RA HR          H RS +         ++  GQ P  RG
Sbjct: 187  --GSENGKRNVYLDSQRGRA-HRYHLVRRRIGLHNRSRIVGMQEPVPASENNGQHPKERG 243

Query: 369  DGWMEIELGEFYNDRGEDGEVKMTLEEVKNGDWKSGLIVEGMELRPKE 226
            DGW+EIELGEF+   GEDGE++M ++EVK+GDWK GL VEG+E+RPKE
Sbjct: 244  DGWLEIELGEFFCKEGEDGELEMRVQEVKSGDWKGGLTVEGIEIRPKE 291


>emb|CBI38318.3| unnamed protein product [Vitis vinifera]
          Length = 287

 Score =  256 bits (655), Expect = 5e-66
 Identities = 133/270 (49%), Positives = 177/270 (65%), Gaps = 1/270 (0%)
 Frame = -3

Query: 1035 EGCVTNIXXXXXXXXXXXXXXXXXXXXSAADSDVIWEKFLPSNYREIVSTSVSNLNLNDF 856
            EGC+ ++                    SAA+SD +WE+FLP++YREI++ S  + +   F
Sbjct: 25   EGCIADVLALTSPRDVCRMSAVASVFLSAAESDALWERFLPADYREIIARSSESSSWRHF 84

Query: 855  TTKKELYFRLCDHPIILEGGTKSFQLEKRSGKKCFMLGAKELGIAWGDTPQYWEWKSQPD 676
            ++KKELYF LCD+P++++ G KSF LEKRSGKKC+ML ++EL I WGDTP YWEW S P+
Sbjct: 85   SSKKELYFTLCDYPLLIDEGKKSFWLEKRSGKKCYMLASRELTIIWGDTPGYWEWTSLPE 144

Query: 675  SRFAEVAGLRSVCWLHIQGKIDTQMLSPNTNYAAYLVFKVTDESYGLDNPTTEGSVQFVL 496
            SRF EVA L++VCW  I+GKI+T MLSP TNYAAYLVF     S+G ++   E S++ V 
Sbjct: 145  SRFPEVAYLQAVCWFEIRGKINTCMLSPRTNYAAYLVFH-AGRSHGFEDVPVESSIEIV- 202

Query: 495  GGGNASGYRTVHL-DYDSNRAPHRRHRRSSVTQYVGQLPNARGDGWMEIELGEFYNDRGE 319
              GN +  R ++L  Y  N  P      SS+   +   P  R D W EIELGEF+ + GE
Sbjct: 203  --GNETTTRVIYLARYRKNEEP-----TSSIRSDL-PYPKKREDSWFEIELGEFFIEGGE 254

Query: 318  DGEVKMTLEEVKNGDWKSGLIVEGMELRPK 229
            D E+++TL EVK G WK GLIVEG+E+RPK
Sbjct: 255  DTELEITLMEVKAGHWKDGLIVEGIEIRPK 284


>ref|XP_002324348.1| predicted protein [Populus trichocarpa] gi|222865782|gb|EEF02913.1|
            predicted protein [Populus trichocarpa]
          Length = 304

 Score =  252 bits (644), Expect = 9e-65
 Identities = 135/288 (46%), Positives = 172/288 (59%), Gaps = 18/288 (6%)
 Frame = -3

Query: 1035 EGCVTNIXXXXXXXXXXXXXXXXXXXXSAADSDVIWEKFLPSNYREIVSTS-VSNLNLND 859
            E C+ N+                    +A +SD +WE+FLP +Y+ I+S S  S++ L  
Sbjct: 18   EACIANVLSFTCPRDACRLSMVCSLFKAAEESDFVWERFLPRDYQSIISKSDASSMLLAS 77

Query: 858  FTTKKELYFRLCDHPIILEGGTKSFQLEKRSGKKCFMLGAKELGIAWGDTPQYWEWKSQP 679
             ++KK LY  LC+ P+I+EGG KS  LEK+SGKKC+ML A++L I WGDTP YW+W S P
Sbjct: 78   ASSKKHLYLMLCEKPLIIEGGKKSISLEKKSGKKCYMLSARDLIIVWGDTPTYWKWNSDP 137

Query: 678  DSRFAEVAGLRSVCWLHIQGKIDTQMLSPNTNYAAYLVFKVTDESYGLDNPTTEGSVQFV 499
             SRF EVA L SVCWL I+GKI+  MLSP T Y AYLVF+ T   YGLD    E  V  V
Sbjct: 138  SSRFGEVAELISVCWLEIRGKINATMLSPATLYTAYLVFRPTRGLYGLDYQPVEVGVGLV 197

Query: 498  LGGGNASGYRTVHLDYDSNRAP--HRRHRR---------------SSVTQYVGQLPNARG 370
               G+  G R V+LD +  R    H   RR                   +  GQ P  R 
Sbjct: 198  ---GSECGMRNVYLDSERGRRQQYHFVSRRIGLFNRCRIVGMPASEPARENNGQYPKKRE 254

Query: 369  DGWMEIELGEFYNDRGEDGEVKMTLEEVKNGDWKSGLIVEGMELRPKE 226
            DGW+EIELGEF+   GED E++M+++EVK GDWK GLIVEG+E+RPKE
Sbjct: 255  DGWLEIELGEFFCKEGEDRELEMSVQEVKGGDWKGGLIVEGIEIRPKE 302


>ref|XP_002513763.1| conserved hypothetical protein [Ricinus communis]
            gi|223546849|gb|EEF48346.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 301

 Score =  246 bits (627), Expect = 9e-63
 Identities = 128/290 (44%), Positives = 169/290 (58%), Gaps = 21/290 (7%)
 Frame = -3

Query: 1035 EGCVTNIXXXXXXXXXXXXXXXXXXXXSAADSDVIWEKFLPSNYREIVSTSVSNLNLNDF 856
            EGC+ ++                     AA+SD +WEKFLP +Y  I+S S  +  L+ F
Sbjct: 17   EGCIADVVSFTGPFDACRLSTVSSTFRDAANSDTVWEKFLPQDYHSIISRSSDSFLLDRF 76

Query: 855  TTKKELYFRLCDHPIILEGGTKSFQLEKRSGKKCFMLGAKELGIAWGDTPQYWEWKSQPD 676
            ++KK+LYF LCD+PI+++ G KSF LEK SGKKC+ML A++L I W DTP YW W   PD
Sbjct: 77   SSKKQLYFSLCDNPILIDDGKKSFALEKWSGKKCYMLSARDLKIVWSDTPTYWRWICLPD 136

Query: 675  SRFAEVAGLRSVCWLHIQGKIDTQMLSPNTNYAAYLVFKVTDESYGLDNPTTEGSVQFVL 496
            SRF EVA L SVCWL I  +I+  MLSP+T Y AY VFK T  +YG +    E  V  V 
Sbjct: 137  SRFPEVAELISVCWLEISARINISMLSPSTLYTAYFVFKSTTGAYGFEYQPAEAVVGLV- 195

Query: 495  GGGNASGYRTVHLDYDSNRAPHRRHRRSSVTQYVGQL---------------------PN 379
              G+ +    V+LD +      RR R   V + +G L                     P 
Sbjct: 196  --GSETCKHNVYLDAERG----RRRRSQIVRRRIGLLNRGRIFGLQASLRNGESDCKYPK 249

Query: 378  ARGDGWMEIELGEFYNDRGEDGEVKMTLEEVKNGDWKSGLIVEGMELRPK 229
             RGDGW+EIELGEF+  +GEDGE+++++ EVK G WK GL V+G+E+RPK
Sbjct: 250  ERGDGWLEIELGEFFKKKGEDGELELSVLEVKGGHWKGGLAVQGIEIRPK 299


>gb|ACU23045.1| unknown [Glycine max]
          Length = 243

 Score =  243 bits (619), Expect = 7e-62
 Identities = 129/244 (52%), Positives = 165/244 (67%)
 Frame = -3

Query: 951 AADSDVIWEKFLPSNYREIVSTSVSNLNLNDFTTKKELYFRLCDHPIILEGGTKSFQLEK 772
           AA+SD +W++FLPS+Y  I+S S S LN   + +KKELY  L D PII++ G KSFQLEK
Sbjct: 16  AAESDAVWKRFLPSDYHSIISQSPSPLN---YPSKKELYLALSDRPIIIDQGKKSFQLEK 72

Query: 771 RSGKKCFMLGAKELGIAWGDTPQYWEWKSQPDSRFAEVAGLRSVCWLHIQGKIDTQMLSP 592
           +SGKKC+ML A+ L I WGDT QYW W +  +SRF EVA LR VCWL I+G ++T +LSP
Sbjct: 73  KSGKKCYMLAARVLSIIWGDTEQYWNWTTDTNSRFPEVAELRDVCWLEIRGVLNTLVLSP 132

Query: 591 NTNYAAYLVFKVTDESYGLDNPTTEGSVQFVLGGGNASGYRTVHLDYDSNRAPHRRHRRS 412
           NT YAAYLVFK+ D + G  N   E SV    G G+    + V LD  +   PHRR    
Sbjct: 133 NTQYAAYLVFKMID-ARGFHNRPVELSVNVFGGHGST---KIVCLD-PNEELPHRRVEGL 187

Query: 411 SVTQYVGQLPNARGDGWMEIELGEFYNDRGEDGEVKMTLEEVKNGDWKSGLIVEGMELRP 232
                  Q PNAR DGW+EIE+GEF+N  G D EV+M++ E K G+WKSGL +EG+E++P
Sbjct: 188 -------QRPNARSDGWLEIEMGEFFN-TGLDDEVQMSVVETKGGNWKSGLFIEGIEVKP 239

Query: 231 KENS 220
           KE +
Sbjct: 240 KEEN 243