BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003530
         (1555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269196.2| PREDICTED: uncharacterized protein LOC100267...   142   2e-31
ref|XP_002521085.1| DNA binding protein, putative [Ricinus commu...   140   1e-30
ref|XP_002321281.1| predicted protein [Populus trichocarpa] gi|2...   137   6e-30
ref|XP_002303042.1| hypothetical protein POPTRDRAFT_756271 [Popu...   133   1e-28
emb|CAN78796.1| hypothetical protein VITISV_008076 [Vitis vinifera]   126   2e-26

>ref|XP_002269196.2| PREDICTED: uncharacterized protein LOC100267035 [Vitis vinifera]
          Length = 2022

 Score =  142 bits (359), Expect = 2e-31
 Identities = 105/277 (37%), Positives = 136/277 (49%), Gaps = 24/277 (8%)
 Frame = -3

Query: 1553 KLVKGMGRGNIVMHQNISLDASHVNGLTMAAGNQVAEKGEQVMHXXXXXXXXXXXXSTAV 1374
            KL+KG GRGN++MH ++S+D SH+NGL+ A G+   EKGEQVMH               V
Sbjct: 1687 KLLKGTGRGNMLMHHSLSVDPSHLNGLSTAPGSHATEKGEQVMHMMQGQSLYSGSGVNPV 1746

Query: 1373 QTXXXXXXXXXXXXXXXXXXXXPPSSSKQVLQMPSSTDNSNQGQVHPVSSGNA-----QQ 1209
            Q                      P+SSKQ+ QMP  +DNSNQGQV  V SG+A      Q
Sbjct: 1747 Q-----PAKPLVPQSATQSQRPAPTSSKQLQQMPPHSDNSNQGQVPAVPSGHATLSAPHQ 1801

Query: 1208 PVLPLAMPPHQQQ-----SLHRQASQSQQTIHRLLPQNRQASSD----SSIDQ--VNQLP 1062
             V P  M  + QQ     S H +   +Q  + R+L  NRQA+SD    S  DQ   +  P
Sbjct: 1802 VVPPSVMTSNHQQLQMQPSPHHKQVNTQPHVQRMLQPNRQANSDRASKSQTDQARADPQP 1861

Query: 1061 VNDTFHM----XXXXXXXXXXXXXXXXXPQWKAQEPF----YDASTPNAASQLASIGNPS 906
            VN+T  M                      QWKA E +    YD+   N A+Q+ SIG+PS
Sbjct: 1862 VNNTSQMSTTAVSQAGMESSTMVSTASASQWKAPESYKESLYDSGITNPATQVGSIGSPS 1921

Query: 905  LPSSSGDEPITLHSQGISQRQFSGGIPIHNQNVQTQW 795
            + SS+G E +   S G  QRQ SG +P H  N  +QW
Sbjct: 1922 MTSSAGGESVPSIS-GPVQRQLSGNLP-HAHNGGSQW 1956


>ref|XP_002521085.1| DNA binding protein, putative [Ricinus communis]
            gi|223539654|gb|EEF41236.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 2009

 Score =  140 bits (352), Expect = 1e-30
 Identities = 98/282 (34%), Positives = 134/282 (47%), Gaps = 29/282 (10%)
 Frame = -3

Query: 1553 KLVKGMGRGNIVMHQNISLDASHVNGLTMAAGNQVAEKGEQVMHXXXXXXXXXXXXSTAV 1374
            KL+KGMGRGN+++HQN+S D S +NGL++  GNQ AEKGE +MH              ++
Sbjct: 1662 KLLKGMGRGNMMVHQNLSTDHSPLNGLSVPPGNQSAEKGEHIMHLMQGQGLYSGSGLNSI 1721

Query: 1373 QTXXXXXXXXXXXXXXXXXXXXP---PSSSKQVLQMPSSTDNSNQGQVHPVSSGN---AQ 1212
            Q                         P SSKQ+ Q+ S  D+S QGQV  V SG+   A 
Sbjct: 1722 QPSKPLVTSQSPNHSQSQQKLFSAAPPPSSKQLQQISSHADHSTQGQVPSVPSGHPLSAS 1781

Query: 1211 QPVLPLAMPPHQQQSLH-------RQASQSQQTIHRLLPQNRQASSD----SSIDQ---- 1077
               LP A+     Q L        +Q  Q+Q T+ R+L QNRQ +SD    S  DQ    
Sbjct: 1782 HQALPAAIMASNHQHLQPQPQIHQKQTGQAQPTVQRMLQQNRQLNSDLQTKSQTDQGHKE 1841

Query: 1076 ---VNQLPVNDT-----FHMXXXXXXXXXXXXXXXXXPQWKAQEPFYDASTPNAASQLAS 921
               +N +P   T                          QWK  EP  D++  N+ASQ+ S
Sbjct: 1842 KQPLNSVPQMGTSTTTSVSQACNDSANVVPVVTSSVASQWKPLEPSCDSAMTNSASQVGS 1901

Query: 920  IGNPSLPSSSGDEPITLHSQGISQRQFSGGIPIHNQNVQTQW 795
            IG+P L +S+G EP++  +Q + QRQ SGG+  H  +   QW
Sbjct: 1902 IGSPPLTNSAGSEPVSSVNQALGQRQLSGGLTQHGSS-GAQW 1942


>ref|XP_002321281.1| predicted protein [Populus trichocarpa] gi|222862054|gb|EEE99596.1|
            predicted protein [Populus trichocarpa]
          Length = 537

 Score =  137 bits (346), Expect = 6e-30
 Identities = 98/285 (34%), Positives = 130/285 (45%), Gaps = 32/285 (11%)
 Frame = -3

Query: 1553 KLVKGMGRGNIVMHQNISLDASHVNGLTMAAGNQVAEKGEQVMHXXXXXXXXXXXXSTAV 1374
            KL+KGMGRGN+V+HQN+ +D S +NGL++  GNQ AEKGEQ+MH             + +
Sbjct: 215  KLLKGMGRGNMVVHQNLLIDHSPLNGLSVPPGNQGAEKGEQIMHLMQGPGLYSGAGLSPI 274

Query: 1373 QTXXXXXXXXXXXXXXXXXXXXPPS---SSKQVLQMPSSTDNSNQGQVHPVSSGN---AQ 1212
            Q+                      S   SSK + QMPS  DNS QG V PV SG    A 
Sbjct: 275  QSSKPLVSSQSLNHSQPQQKLYSGSTNPSSKPLQQMPSHLDNSVQGHVQPVLSGQTLTAT 334

Query: 1211 QPVLPLAMPPHQQQSLH-----RQASQSQQTIHRLLPQNRQASSDSSIDQVNQLPVNDTF 1047
                P+ +P HQ    H     +Q SQ Q  + R+L +NRQ +SD +       P ND  
Sbjct: 335  HQNTPVMVPNHQHLQPHLQPHQKQVSQPQPAVQRMLQKNRQVNSDLATK-----PQNDQS 389

Query: 1046 H--------------------MXXXXXXXXXXXXXXXXXPQWKAQE-PFYDASTPNAASQ 930
            H                                       QWK+ E P +D+   N+ASQ
Sbjct: 390  HTDQQTPNISRTGTRTSTMTTQGCNDTANVAPVVSSASAIQWKSSESPLHDSGMENSASQ 449

Query: 929  LASIGNPSLPSSSGDEPITLHSQGISQRQFSGGIPIHNQNVQTQW 795
               IG+P+L S++G EP    S G   RQ SGG+P++  N   QW
Sbjct: 450  KGPIGSPALTSATGSEPAV--SLGSVHRQLSGGLPMNGHNGGAQW 492


>ref|XP_002303042.1| hypothetical protein POPTRDRAFT_756271 [Populus trichocarpa]
            gi|222844768|gb|EEE82315.1| hypothetical protein
            POPTRDRAFT_756271 [Populus trichocarpa]
          Length = 2006

 Score =  133 bits (334), Expect = 1e-28
 Identities = 92/281 (32%), Positives = 128/281 (45%), Gaps = 28/281 (9%)
 Frame = -3

Query: 1553 KLVKGMGRGNIVMHQNISLDASHVNGLTMAAGNQVAEKGEQVMHXXXXXXXXXXXXSTAV 1374
            KL+KGMGRGN+V+HQN+  D S +NGL++  GN   EKGEQ+MH             + +
Sbjct: 1659 KLLKGMGRGNMVVHQNLPNDHSPLNGLSVPPGNHGVEKGEQIMHLMQGQGLYSGTGLSPI 1718

Query: 1373 QTXXXXXXXXXXXXXXXXXXXXP---PSSSKQVLQMPSSTDNSNQGQVHPVSSGN---AQ 1212
             T                          SSK + QMPS  ++S QGQV PV SG    A 
Sbjct: 1719 HTSKPLGPSQSPNHSQPQQKLYSGPTTPSSKPLQQMPSHLESSTQGQVQPVPSGQTLTAT 1778

Query: 1211 QPVLPLAMPPHQQQSLH-----RQASQSQQTIHRLLPQNRQASSD---------SSIDQV 1074
                P+ +P HQ    H     +Q SQ Q T+ R+L Q+R  +SD            DQ 
Sbjct: 1779 HQNTPVMVPSHQHLQQHPQPHQKQVSQPQPTVQRMLQQSRLLNSDLPTKPQTDQGHADQQ 1838

Query: 1073 NQLPVNDT-------FHMXXXXXXXXXXXXXXXXXPQWKAQEP-FYDASTPNAASQLASI 918
                ++ T         +                  QWK+ EP  +D+   + AS++  I
Sbjct: 1839 TSNNISQTGTSTSTGMPLACNDTSNVAPVVSSVSEMQWKSSEPSLHDSGMADTASKVGPI 1898

Query: 917  GNPSLPSSSGDEPITLHSQGISQRQFSGGIPIHNQNVQTQW 795
            G+P L S++G E +   SQG   RQ SGG+P+H  N  T+W
Sbjct: 1899 GSPPLTSAAGSEQVVPVSQGSVHRQLSGGLPLHCHNGGTRW 1939


>emb|CAN78796.1| hypothetical protein VITISV_008076 [Vitis vinifera]
          Length = 2257

 Score =  126 bits (316), Expect = 2e-26
 Identities = 93/254 (36%), Positives = 124/254 (48%), Gaps = 15/254 (5%)
 Frame = -3

Query: 1553 KLVKGMGRGNIVMHQNISLDASHVNGLTMAAGNQVAEKGEQVMHXXXXXXXXXXXXSTAV 1374
            KL+KG GRGN+++H ++S+D SH+NGL+ A G+   EKGEQVMH               V
Sbjct: 1703 KLLKGTGRGNMLIHHSLSVDPSHLNGLSTAPGSHATEKGEQVMHMMQGQSLYSGSGVNPV 1762

Query: 1373 QTXXXXXXXXXXXXXXXXXXXXPPSSSKQVLQMPSSTDNSNQGQVHPVSSGNA-----QQ 1209
            Q                      P+SSKQ+ QMP  +DNSNQGQV  V SG+A      Q
Sbjct: 1763 Q-----PAKPLVPQSATQSQRPAPTSSKQLQQMPPHSDNSNQGQVPAVPSGHATLSAPHQ 1817

Query: 1208 PVLPLAMPPHQQQ-----SLHRQASQSQQTIHRLLPQNRQASSD-SSIDQVNQLPVNDTF 1047
             V P  M  + QQ     S H +   +Q  + R+L  NRQA+SD +S  Q +Q   +   
Sbjct: 1818 VVPPSVMTSNHQQLQMQPSPHHKQVNTQPHVQRMLQPNRQANSDRASKSQTDQARAD--- 1874

Query: 1046 HMXXXXXXXXXXXXXXXXXPQWKAQEPF----YDASTPNAASQLASIGNPSLPSSSGDEP 879
                                QWKA E +    YD+   N A+Q+ SIG+PS+ SS+G E 
Sbjct: 1875 --PQPAGMESSTMVSTAGASQWKAPESYKESLYDSGITNPATQVGSIGSPSMTSSAGGES 1932

Query: 878  ITLHSQGISQRQFS 837
            +   S G  QRQ S
Sbjct: 1933 VPSIS-GPVQRQLS 1945