BLASTX nr result
ID: Coptis25_contig00003522
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00003522 (1625 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004149671.1| PREDICTED: pyruvate dehydrogenase E1 compone... 625 e-176 ref|XP_002305328.1| predicted protein [Populus trichocarpa] gi|1... 623 e-176 ref|NP_174304.1| pyruvate dehydrogenase E1 beta [Arabidopsis tha... 619 e-175 gb|AAB86804.1| pyruvate dehydrogenase E1 beta subunit [Arabidops... 619 e-175 ref|XP_004149670.1| PREDICTED: pyruvate dehydrogenase E1 compone... 619 e-175 >ref|XP_004149671.1| PREDICTED: pyruvate dehydrogenase E1 component subunit beta-like isoform 2 [Cucumis sativus] Length = 410 Score = 625 bits (1611), Expect = e-176 Identities = 331/409 (80%), Positives = 351/409 (85%), Gaps = 6/409 (1%) Frame = -2 Query: 1447 AAAATVSLSSVNST-TKRSLLFSP-KSISFSESKKGKFFACRFN-NGKETAFGMSPKVVE 1277 A A +LS NS + SLL P +S+SF E +KG+FF R + G AF +P+ Sbjct: 7 ALGAPSALSPPNSLHSNTSLLLHPSRSLSFFE-RKGRFFIVRSDVTGANHAF--TPR--S 61 Query: 1276 SDSKLVTSAVAEKADAS---TKTKSGHELLLFEALQEGLEEEMDRDPRVCVMGEDVGHYG 1106 L+T+AVA KAD S T +K GHELLLFEAL+EGLEEEMDRDPRVCVMGEDVGHYG Sbjct: 62 RSHHLITNAVATKADTSSPSTTSKPGHELLLFEALREGLEEEMDRDPRVCVMGEDVGHYG 121 Query: 1105 GSYKVTKGLAKKFGDLRVLDTPIAENSFTGMGIGAAMSGLRPVIEGMNMGFLLLAFNQIS 926 GSYKVTKGLA K+GDLRVLDTPIAENSFTGMGIGAAM+GLRP++EGMNMGFLLLAFNQIS Sbjct: 122 GSYKVTKGLATKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQIS 181 Query: 925 NNCGMLHYTSGGQFTXXXXXXXXXXXXRQLGAEHSQRLESYFQSIPGIQMVACSTPYNAK 746 NNCGMLHYTSGGQF RQLGAEHSQRLESYFQSIPGIQMVACSTPYNAK Sbjct: 182 NNCGMLHYTSGGQFKIPIVIRGPGGVGRQLGAEHSQRLESYFQSIPGIQMVACSTPYNAK 241 Query: 745 GLMKAAIRSENPVILFEHVLLYNLKESIPDEEYVCSLEEAEMVRPGEHVTILTYSRMRYH 566 GLMKAAIRSENPVILFEHVLLYNLKE IPDEEY+CSLEEAEMVRPGEHVTILTYSRMRYH Sbjct: 242 GLMKAAIRSENPVILFEHVLLYNLKERIPDEEYICSLEEAEMVRPGEHVTILTYSRMRYH 301 Query: 565 VMQAVKTLVNNGYDPEVIDIRSLKPFDLHTIGNSIKKTHRVLIVEECMRTGGIGASLTAA 386 VMQA KTLVN GYDPEVIDIRSLKPFDLHTIGNS+KKTHRVLIVEECMRTGGIGASLTAA Sbjct: 302 VMQAAKTLVNKGYDPEVIDIRSLKPFDLHTIGNSVKKTHRVLIVEECMRTGGIGASLTAA 361 Query: 385 ITENFYDYLDAPIRCLSSQDVPTPYAGTLEDVTVVQPAQIVTAVEQLCQ 239 ITENF+DYLDAPI CLSSQDVPTPYAGTLED TVVQPAQIVTAVEQLCQ Sbjct: 362 ITENFHDYLDAPIVCLSSQDVPTPYAGTLEDWTVVQPAQIVTAVEQLCQ 410 >ref|XP_002305328.1| predicted protein [Populus trichocarpa] gi|118482251|gb|ABK93053.1| unknown [Populus trichocarpa] gi|222848292|gb|EEE85839.1| predicted protein [Populus trichocarpa] Length = 418 Score = 623 bits (1606), Expect = e-176 Identities = 321/415 (77%), Positives = 346/415 (83%), Gaps = 4/415 (0%) Frame = -2 Query: 1471 MSAVSQTIAAAATVSLSSV-NSTTKRSLLFSPKSISFSESKKGKFFACRFNNGKETAFGM 1295 M+ + Q + AA + +S+ NS + LL S +E K F R + G Sbjct: 1 MATIFQALGGAAAAAAASLTNSFDSKKLLLPSSRRSLAERKASSFLVVRSDGSLNLNLGS 60 Query: 1294 SPKVVESDSKLVTSAVAEKAD---ASTKTKSGHELLLFEALQEGLEEEMDRDPRVCVMGE 1124 S + KL+T+AVA KAD AS+ +K GHELLLFEAL+EGLEEEMDRD VCVMGE Sbjct: 61 SNGRARTVDKLITNAVATKADTSAASSASKPGHELLLFEALREGLEEEMDRDLHVCVMGE 120 Query: 1123 DVGHYGGSYKVTKGLAKKFGDLRVLDTPIAENSFTGMGIGAAMSGLRPVIEGMNMGFLLL 944 DVGHYGGSYKVTKGLA+K+GDLRVLDTPIAENSFTGMGIGAAM+GLRP+IEGMNMGFLLL Sbjct: 121 DVGHYGGSYKVTKGLAEKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIIEGMNMGFLLL 180 Query: 943 AFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXRQLGAEHSQRLESYFQSIPGIQMVACS 764 AFNQISNNCGMLHYTSGGQFT RQLGAEHSQRLESYFQSIPGIQMVACS Sbjct: 181 AFNQISNNCGMLHYTSGGQFTIPVVIRGPGGVGRQLGAEHSQRLESYFQSIPGIQMVACS 240 Query: 763 TPYNAKGLMKAAIRSENPVILFEHVLLYNLKESIPDEEYVCSLEEAEMVRPGEHVTILTY 584 TPYNAKGLMKAAIRSENPVILFEHVLLYNLKE IPDEEY+C+LEEAEMVRPGEHVTILTY Sbjct: 241 TPYNAKGLMKAAIRSENPVILFEHVLLYNLKERIPDEEYICNLEEAEMVRPGEHVTILTY 300 Query: 583 SRMRYHVMQAVKTLVNNGYDPEVIDIRSLKPFDLHTIGNSIKKTHRVLIVEECMRTGGIG 404 SRMRYHVMQA KTLVN GYDPEVIDIRSLKPFDLH IGNS+KKTHRV+IVEECMRTGGIG Sbjct: 301 SRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLHMIGNSVKKTHRVMIVEECMRTGGIG 360 Query: 403 ASLTAAITENFYDYLDAPIRCLSSQDVPTPYAGTLEDVTVVQPAQIVTAVEQLCQ 239 ASLTAAITENF+DYLDAPI CLSSQDVPTPYAGTLE+ TVVQPAQIVTAVEQLCQ Sbjct: 361 ASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQLCQ 415 >ref|NP_174304.1| pyruvate dehydrogenase E1 beta [Arabidopsis thaliana] gi|12321636|gb|AAG50862.1|AC074176_11 pyruvate dehydrogenase E1 beta subunit, putative [Arabidopsis thaliana] gi|13605515|gb|AAK32751.1|AF361583_1 At1g30120/T2H7_8 [Arabidopsis thaliana] gi|20334776|gb|AAM16249.1| At1g30120/T2H7_8 [Arabidopsis thaliana] gi|62321138|dbj|BAD94262.1| hypothetical protein [Arabidopsis thaliana] gi|332193060|gb|AEE31181.1| pyruvate dehydrogenase E1 beta [Arabidopsis thaliana] Length = 406 Score = 619 bits (1597), Expect = e-175 Identities = 317/403 (78%), Positives = 343/403 (85%) Frame = -2 Query: 1447 AAAATVSLSSVNSTTKRSLLFSPKSISFSESKKGKFFACRFNNGKETAFGMSPKVVESDS 1268 A AAT +LS+ NS + L +P + S + + + ++ + +FG +V S Sbjct: 8 AGAATTTLSTFNSVDSKKLFVAPSRTNLSV--RSQRYIVAGSDASKKSFGSGLRVRHSQ- 64 Query: 1267 KLVTSAVAEKADASTKTKSGHELLLFEALQEGLEEEMDRDPRVCVMGEDVGHYGGSYKVT 1088 KL+ +AVA K +A T +GHELLLFEALQEGLEEEMDRDP VCVMGEDVGHYGGSYKVT Sbjct: 65 KLIPNAVATK-EADTSASTGHELLLFEALQEGLEEEMDRDPHVCVMGEDVGHYGGSYKVT 123 Query: 1087 KGLAKKFGDLRVLDTPIAENSFTGMGIGAAMSGLRPVIEGMNMGFLLLAFNQISNNCGML 908 KGLA KFGDLRVLDTPI EN+FTGMGIGAAM+GLRPVIEGMNMGFLLLAFNQISNNCGML Sbjct: 124 KGLADKFGDLRVLDTPICENAFTGMGIGAAMTGLRPVIEGMNMGFLLLAFNQISNNCGML 183 Query: 907 HYTSGGQFTXXXXXXXXXXXXRQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAA 728 HYTSGGQFT RQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAA Sbjct: 184 HYTSGGQFTIPVVIRGPGGVGRQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAA 243 Query: 727 IRSENPVILFEHVLLYNLKESIPDEEYVCSLEEAEMVRPGEHVTILTYSRMRYHVMQAVK 548 IRSENPVILFEHVLLYNLKE IPDE+YVC+LEEAEMVRPGEH+TILTYSRMRYHVMQA K Sbjct: 244 IRSENPVILFEHVLLYNLKEKIPDEDYVCNLEEAEMVRPGEHITILTYSRMRYHVMQAAK 303 Query: 547 TLVNNGYDPEVIDIRSLKPFDLHTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFY 368 TLVN GYDPEVIDIRSLKPFDLHTIGNS+KKTHRVLIVEECMRTGGIGASLTAAI ENF+ Sbjct: 304 TLVNKGYDPEVIDIRSLKPFDLHTIGNSVKKTHRVLIVEECMRTGGIGASLTAAINENFH 363 Query: 367 DYLDAPIRCLSSQDVPTPYAGTLEDVTVVQPAQIVTAVEQLCQ 239 DYLDAP+ CLSSQDVPTPYAGTLE+ TVVQPAQIVTAVEQLCQ Sbjct: 364 DYLDAPVMCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQLCQ 406 >gb|AAB86804.1| pyruvate dehydrogenase E1 beta subunit [Arabidopsis thaliana] gi|21593321|gb|AAM65270.1| pyruvate dehydrogenase E1 beta subunit, putative [Arabidopsis thaliana] Length = 406 Score = 619 bits (1596), Expect = e-175 Identities = 316/403 (78%), Positives = 343/403 (85%) Frame = -2 Query: 1447 AAAATVSLSSVNSTTKRSLLFSPKSISFSESKKGKFFACRFNNGKETAFGMSPKVVESDS 1268 A AAT +LS+ NS + L +P + S + + + ++ + +FG +V S Sbjct: 8 AGAATTTLSTFNSVDSKKLFVAPSRTNLSV--RSQRYIVAGSDASKKSFGSGLRVRHSQ- 64 Query: 1267 KLVTSAVAEKADASTKTKSGHELLLFEALQEGLEEEMDRDPRVCVMGEDVGHYGGSYKVT 1088 KL+ +AVA K +A T +GHELLLFEALQEGLEEEMDRDP VCVMGEDVGHYGGSYKVT Sbjct: 65 KLIPNAVATK-EADTSASTGHELLLFEALQEGLEEEMDRDPHVCVMGEDVGHYGGSYKVT 123 Query: 1087 KGLAKKFGDLRVLDTPIAENSFTGMGIGAAMSGLRPVIEGMNMGFLLLAFNQISNNCGML 908 KGLA KFGDLRVLDTPI EN+FTGMGIGAAM+GLRPVIEGMNMGFLLLAFNQISNNCGML Sbjct: 124 KGLADKFGDLRVLDTPICENAFTGMGIGAAMTGLRPVIEGMNMGFLLLAFNQISNNCGML 183 Query: 907 HYTSGGQFTXXXXXXXXXXXXRQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAA 728 HYTSGGQFT RQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAA Sbjct: 184 HYTSGGQFTIPVVIRGPGGVGRQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAA 243 Query: 727 IRSENPVILFEHVLLYNLKESIPDEEYVCSLEEAEMVRPGEHVTILTYSRMRYHVMQAVK 548 IRSENPVILFEHVLLYNLKE IPDE+Y+C+LEEAEMVRPGEH+TILTYSRMRYHVMQA K Sbjct: 244 IRSENPVILFEHVLLYNLKEKIPDEDYICNLEEAEMVRPGEHITILTYSRMRYHVMQAAK 303 Query: 547 TLVNNGYDPEVIDIRSLKPFDLHTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFY 368 TLVN GYDPEVIDIRSLKPFDLHTIGNS+KKTHRVLIVEECMRTGGIGASLTAAI ENF+ Sbjct: 304 TLVNKGYDPEVIDIRSLKPFDLHTIGNSVKKTHRVLIVEECMRTGGIGASLTAAINENFH 363 Query: 367 DYLDAPIRCLSSQDVPTPYAGTLEDVTVVQPAQIVTAVEQLCQ 239 DYLDAP+ CLSSQDVPTPYAGTLE+ TVVQPAQIVTAVEQLCQ Sbjct: 364 DYLDAPVMCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQLCQ 406 >ref|XP_004149670.1| PREDICTED: pyruvate dehydrogenase E1 component subunit beta-like isoform 1 [Cucumis sativus] Length = 437 Score = 619 bits (1595), Expect = e-175 Identities = 318/380 (83%), Positives = 334/380 (87%), Gaps = 4/380 (1%) Frame = -2 Query: 1366 FSESKKGKFFACRFN-NGKETAFGMSPKVVESDSKLVTSAVAEKADAS---TKTKSGHEL 1199 F +KG+FF R + G AF +P+ L+T+AVA KAD S T +K GHEL Sbjct: 62 FDSERKGRFFIVRSDVTGANHAF--TPR--SRSHHLITNAVATKADTSSPSTTSKPGHEL 117 Query: 1198 LLFEALQEGLEEEMDRDPRVCVMGEDVGHYGGSYKVTKGLAKKFGDLRVLDTPIAENSFT 1019 LLFEAL+EGLEEEMDRDPRVCVMGEDVGHYGGSYKVTKGLA K+GDLRVLDTPIAENSFT Sbjct: 118 LLFEALREGLEEEMDRDPRVCVMGEDVGHYGGSYKVTKGLATKYGDLRVLDTPIAENSFT 177 Query: 1018 GMGIGAAMSGLRPVIEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXRQ 839 GMGIGAAM+GLRP++EGMNMGFLLLAFNQISNNCGMLHYTSGGQF RQ Sbjct: 178 GMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFKIPIVIRGPGGVGRQ 237 Query: 838 LGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKESIP 659 LGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKE IP Sbjct: 238 LGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKERIP 297 Query: 658 DEEYVCSLEEAEMVRPGEHVTILTYSRMRYHVMQAVKTLVNNGYDPEVIDIRSLKPFDLH 479 DEEY+CSLEEAEMVRPGEHVTILTYSRMRYHVMQA KTLVN GYDPEVIDIRSLKPFDLH Sbjct: 298 DEEYICSLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLH 357 Query: 478 TIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFYDYLDAPIRCLSSQDVPTPYAGTL 299 TIGNS+KKTHRVLIVEECMRTGGIGASLTAAITENF+DYLDAPI CLSSQDVPTPYAGTL Sbjct: 358 TIGNSVKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTL 417 Query: 298 EDVTVVQPAQIVTAVEQLCQ 239 ED TVVQPAQIVTAVEQLCQ Sbjct: 418 EDWTVVQPAQIVTAVEQLCQ 437