BLASTX nr result
ID: Coptis25_contig00003521
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00003521 (306 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAC43323.1| putative alpha7 proteasome subunit [Nicotiana ta... 64 1e-08 sp|O24362.1|PSA3_SPIOL RecName: Full=Proteasome subunit alpha ty... 61 1e-07 gb|AFK39762.1| unknown [Medicago truncatula] 60 2e-07 gb|ACU24078.1| unknown [Glycine max] 60 2e-07 ref|NP_001241123.1| uncharacterized protein LOC100820387 [Glycin... 60 2e-07 >emb|CAC43323.1| putative alpha7 proteasome subunit [Nicotiana tabacum] Length = 249 Score = 63.9 bits (154), Expect = 1e-08 Identities = 31/39 (79%), Positives = 34/39 (87%) Frame = -2 Query: 305 VHRHSGMAVAGLAADGRQIVVRTKSEATNYERSLKELLM 189 VHRHSGMAVAGLAADGRQIV RTKSEATNYE + E ++ Sbjct: 70 VHRHSGMAVAGLAADGRQIVARTKSEATNYESTYGEPIL 108 >sp|O24362.1|PSA3_SPIOL RecName: Full=Proteasome subunit alpha type-3; AltName: Full=20S proteasome alpha subunit G; AltName: Full=20S proteasome subunit alpha-7; AltName: Full=Proteasome component C8 gi|2285802|dbj|BAA21651.1| 26S proteasome alpha subunit [Spinacia oleracea] Length = 249 Score = 60.8 bits (146), Expect = 1e-07 Identities = 29/31 (93%), Positives = 29/31 (93%) Frame = -2 Query: 305 VHRHSGMAVAGLAADGRQIVVRTKSEATNYE 213 VHRHSGMAVAGLAADGRQIV R KSEATNYE Sbjct: 70 VHRHSGMAVAGLAADGRQIVARAKSEATNYE 100 >gb|AFK39762.1| unknown [Medicago truncatula] Length = 249 Score = 59.7 bits (143), Expect = 2e-07 Identities = 28/31 (90%), Positives = 29/31 (93%) Frame = -2 Query: 305 VHRHSGMAVAGLAADGRQIVVRTKSEATNYE 213 VHRHSGMAVAGLAADGRQIV R KSEATNY+ Sbjct: 70 VHRHSGMAVAGLAADGRQIVARAKSEATNYD 100 >gb|ACU24078.1| unknown [Glycine max] Length = 249 Score = 59.7 bits (143), Expect = 2e-07 Identities = 28/31 (90%), Positives = 29/31 (93%) Frame = -2 Query: 305 VHRHSGMAVAGLAADGRQIVVRTKSEATNYE 213 VHRHSGMAVAGLAADGRQIV R KSEATNY+ Sbjct: 70 VHRHSGMAVAGLAADGRQIVARAKSEATNYD 100 >ref|NP_001241123.1| uncharacterized protein LOC100820387 [Glycine max] gi|255641143|gb|ACU20849.1| unknown [Glycine max] Length = 249 Score = 59.7 bits (143), Expect = 2e-07 Identities = 28/31 (90%), Positives = 29/31 (93%) Frame = -2 Query: 305 VHRHSGMAVAGLAADGRQIVVRTKSEATNYE 213 VHRHSGMAVAGLAADGRQIV R KSEATNY+ Sbjct: 70 VHRHSGMAVAGLAADGRQIVARAKSEATNYD 100