BLASTX nr result

ID: Coptis25_contig00003521 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003521
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC43323.1| putative alpha7 proteasome subunit [Nicotiana ta...    64   1e-08
sp|O24362.1|PSA3_SPIOL RecName: Full=Proteasome subunit alpha ty...    61   1e-07
gb|AFK39762.1| unknown [Medicago truncatula]                           60   2e-07
gb|ACU24078.1| unknown [Glycine max]                                   60   2e-07
ref|NP_001241123.1| uncharacterized protein LOC100820387 [Glycin...    60   2e-07

>emb|CAC43323.1| putative alpha7 proteasome subunit [Nicotiana tabacum]
          Length = 249

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/39 (79%), Positives = 34/39 (87%)
 Frame = -2

Query: 305 VHRHSGMAVAGLAADGRQIVVRTKSEATNYERSLKELLM 189
           VHRHSGMAVAGLAADGRQIV RTKSEATNYE +  E ++
Sbjct: 70  VHRHSGMAVAGLAADGRQIVARTKSEATNYESTYGEPIL 108


>sp|O24362.1|PSA3_SPIOL RecName: Full=Proteasome subunit alpha type-3; AltName: Full=20S
           proteasome alpha subunit G; AltName: Full=20S proteasome
           subunit alpha-7; AltName: Full=Proteasome component C8
           gi|2285802|dbj|BAA21651.1| 26S proteasome alpha subunit
           [Spinacia oleracea]
          Length = 249

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 29/31 (93%), Positives = 29/31 (93%)
 Frame = -2

Query: 305 VHRHSGMAVAGLAADGRQIVVRTKSEATNYE 213
           VHRHSGMAVAGLAADGRQIV R KSEATNYE
Sbjct: 70  VHRHSGMAVAGLAADGRQIVARAKSEATNYE 100


>gb|AFK39762.1| unknown [Medicago truncatula]
          Length = 249

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/31 (90%), Positives = 29/31 (93%)
 Frame = -2

Query: 305 VHRHSGMAVAGLAADGRQIVVRTKSEATNYE 213
           VHRHSGMAVAGLAADGRQIV R KSEATNY+
Sbjct: 70  VHRHSGMAVAGLAADGRQIVARAKSEATNYD 100


>gb|ACU24078.1| unknown [Glycine max]
          Length = 249

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/31 (90%), Positives = 29/31 (93%)
 Frame = -2

Query: 305 VHRHSGMAVAGLAADGRQIVVRTKSEATNYE 213
           VHRHSGMAVAGLAADGRQIV R KSEATNY+
Sbjct: 70  VHRHSGMAVAGLAADGRQIVARAKSEATNYD 100


>ref|NP_001241123.1| uncharacterized protein LOC100820387 [Glycine max]
           gi|255641143|gb|ACU20849.1| unknown [Glycine max]
          Length = 249

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/31 (90%), Positives = 29/31 (93%)
 Frame = -2

Query: 305 VHRHSGMAVAGLAADGRQIVVRTKSEATNYE 213
           VHRHSGMAVAGLAADGRQIV R KSEATNY+
Sbjct: 70  VHRHSGMAVAGLAADGRQIVARAKSEATNYD 100


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