BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003515
         (1980 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78871.1| hypothetical protein VITISV_024970 [Vitis vinifera]   422   e-115
ref|XP_002266433.1| PREDICTED: uncharacterized protein LOC100263...   421   e-115
ref|XP_002532498.1| ring finger protein, putative [Ricinus commu...   368   4e-99
ref|XP_002308375.1| predicted protein [Populus trichocarpa] gi|2...   356   1e-95
ref|XP_003609509.1| RING finger protein [Medicago truncatula] gi...   337   5e-90

>emb|CAN78871.1| hypothetical protein VITISV_024970 [Vitis vinifera]
          Length = 542

 Score =  422 bits (1084), Expect = e-115
 Identities = 265/539 (49%), Positives = 321/539 (59%), Gaps = 58/539 (10%)
 Frame = -1

Query: 1860 MGSSNSRLTGGGRGMKRRLS---SLLICGSNDTHDH------------DASTSNNAPTV- 1729
            MGSS+SRL  G R  + RL+   S LICG + +               +A   N+  TV 
Sbjct: 1    MGSSSSRL--GSRSSRPRLNRRLSSLICGGSTSRAQPEIEDCPAELLVNAIEHNDPVTVE 58

Query: 1728 ---THDMDVTMAVGDLGSSIKEV----SECSDGPSDNSSGTIDR---------KFSSRSK 1597
               T +  +  + G   +S +      SE S    +++S   D          K  S SK
Sbjct: 59   QSSTKESHLASSAGTAFTSTRTETGTSSESSSAAREDTSFINDLSNIETSNRGKCLSESK 118

Query: 1596 GSILSPLNVDNNAKV-PYFETTGHVGXXXXS------VAQQSLGDNLNSVSKADTGSEGR 1438
              I   L  D  ++V PY+E + ++                +   N+ +V+  ++  + R
Sbjct: 119  ELIPPHLVSDEPSQVDPYWERSSNIASASFKDLHPLDPVSANARANMGAVNVHNSMDKDR 178

Query: 1437 SQIRQEVVSSSTSD------------NLENTSLGIHASD---SAFVPSVTEFSLSPQS-G 1306
            S     V+ SS+S             + EN   G+ A D   S  VP+VT+  ++  S G
Sbjct: 179  SNSGAGVIHSSSSHAPEHRASYSDGASAENHVSGVSAIDNSSSVSVPAVTDSPVTLHSQG 238

Query: 1305 TEIAQEAAPVSPGFFT---LDSQRNRSNGGVLHVDVVTISSSALFSSSGEVSNNEARRNS 1135
             E  QEA P   G       D +R R +G VLHVDVV+ISS+ L S++ EVSN EARRNS
Sbjct: 239  DESIQEAIPSGLGIVVSDRADRERGRRDGSVLHVDVVSISSNILSSTTAEVSNREARRNS 298

Query: 1134 RRLFWDAFSRRGSRRHNDSRTIVFSSEDPDDLGSHDRWLLDFSGDLFEXXXXXXXXXXXX 955
            RRLFWDAFSRR SRRH+DS TIVFS++D DDLGSHDRWLLDFSGD FE            
Sbjct: 299  RRLFWDAFSRRSSRRHSDSPTIVFSTDDTDDLGSHDRWLLDFSGDFFEDGVGGDSGYLGS 358

Query: 954  XXXGTHEGRWHSRSEIWDRFRGGLDESSRRPRYCASGQHPDGTCSCESVLMGGESSTRGS 775
                 +E RWHSRSEIW+R RGGLDESSRR   C +G HPDG CSC+S LM  ESSTR S
Sbjct: 359  RIHSMNERRWHSRSEIWERLRGGLDESSRRTTTCPTGLHPDGMCSCDSFLMAEESSTRAS 418

Query: 774  ISRIVMLAEALFEVLDEIHRQPXXXXXSMVSVPAPESVVNSFPLKIHKKHNAAESIDQDV 595
            ISRIVMLAEALFEVLDEIHRQP     SMVS+PAPESVV+SFPLK HKK + A+S  +DV
Sbjct: 419  ISRIVMLAEALFEVLDEIHRQPVSLALSMVSLPAPESVVDSFPLKNHKKADTAQS-GEDV 477

Query: 594  EQCYICLAEYEEGDKIRVLPCRHEYHMACVDKWLKEIHGVCPLCRGDVCANLAEGFISN 418
             QCYICLAEYEEGDKIRVLPC HEYHM+CVDKWLKEIHGVCPLCRGDV   L  G +SN
Sbjct: 478  AQCYICLAEYEEGDKIRVLPCHHEYHMSCVDKWLKEIHGVCPLCRGDVREGLTGGSVSN 536


>ref|XP_002266433.1| PREDICTED: uncharacterized protein LOC100263653 [Vitis vinifera]
          Length = 542

 Score =  421 bits (1083), Expect = e-115
 Identities = 269/541 (49%), Positives = 320/541 (59%), Gaps = 60/541 (11%)
 Frame = -1

Query: 1860 MGSSNSRLTGGGRG----MKRRLSSLLICGSN-----DTHDHDASTSNNAPTVTHDMDVT 1708
            MGSS+SRL  G R     + RRLSSL+  GS      +  D  A    NA  + H+  VT
Sbjct: 1    MGSSSSRL--GSRSSRPRLNRRLSSLICGGSTSRAQPEIEDCPAELLVNA--IEHNDPVT 56

Query: 1707 MA-----VGDLGSSIKEV-----------SECSDGPSDNSSGTIDR---------KFSSR 1603
            +         L SS               SE S    +++S   D          K  S 
Sbjct: 57   VEQSSTKASHLASSAGTAFTSTRTETGTSSESSSAAREDTSFINDLSNIETSNRGKCLSE 116

Query: 1602 SKGSILSPLNVDNNAKV-PYFETTGHVGXXXXS------VAQQSLGDNLNSVSKADTGSE 1444
            SK  I   L  D  ++V PY+E + ++                +   N+ +V+  ++  +
Sbjct: 117  SKELIPPHLVSDEPSQVDPYWERSSNIASASFKDLHPLDPVSANARANMGAVNVHNSMDK 176

Query: 1443 GRSQIRQEVVSSSTSD------------NLENTSLGIHASD---SAFVPSVTEFSLSPQS 1309
             RS     V+ SS+S             + EN   G+ A D   S  VP+VT+  ++  S
Sbjct: 177  DRSNSGAGVIHSSSSHAPEHRASYSDGASAENHVSGVSAIDNSSSVSVPAVTDSPVTLHS 236

Query: 1308 -GTEIAQEAAPVSPGFFT---LDSQRNRSNGGVLHVDVVTISSSALFSSSGEVSNNEARR 1141
             G E  QEA P   G       D +R R +G VLHVDVV+ISS+ L S++ EVSN EARR
Sbjct: 237  QGDESIQEAIPSGLGIVVSDRADRERGRRDGSVLHVDVVSISSNILSSTTAEVSNREARR 296

Query: 1140 NSRRLFWDAFSRRGSRRHNDSRTIVFSSEDPDDLGSHDRWLLDFSGDLFEXXXXXXXXXX 961
            NSRRLFWDAFSRR SRRH+DS TIVFS++D DDLGSHDRWLLDFSGD FE          
Sbjct: 297  NSRRLFWDAFSRRSSRRHSDSPTIVFSTDDTDDLGSHDRWLLDFSGDFFEDGVGGDSGYL 356

Query: 960  XXXXXGTHEGRWHSRSEIWDRFRGGLDESSRRPRYCASGQHPDGTCSCESVLMGGESSTR 781
                   +E RWHSRSEIW+R RGGLDESSRR   C +G HPDG CSC+S LM  ESSTR
Sbjct: 357  GSRIHSMNERRWHSRSEIWERLRGGLDESSRRTTTCPTGLHPDGMCSCDSFLMAEESSTR 416

Query: 780  GSISRIVMLAEALFEVLDEIHRQPXXXXXSMVSVPAPESVVNSFPLKIHKKHNAAESIDQ 601
             SISRIVMLAEALFEVLDEIHRQP     SMVS+PAPESVV+SFPLK HKK + A+S  +
Sbjct: 417  ASISRIVMLAEALFEVLDEIHRQPVSLALSMVSLPAPESVVDSFPLKNHKKADTAQS-GE 475

Query: 600  DVEQCYICLAEYEEGDKIRVLPCRHEYHMACVDKWLKEIHGVCPLCRGDVCANLAEGFIS 421
            DV QCYICLAEYEEGDKIRVLPC HEYHM+CVDKWLKEIHGVCPLCRGDV   L  G +S
Sbjct: 476  DVAQCYICLAEYEEGDKIRVLPCHHEYHMSCVDKWLKEIHGVCPLCRGDVREGLTGGSVS 535

Query: 420  N 418
            N
Sbjct: 536  N 536


>ref|XP_002532498.1| ring finger protein, putative [Ricinus communis]
            gi|223527773|gb|EEF29874.1| ring finger protein, putative
            [Ricinus communis]
          Length = 550

 Score =  368 bits (944), Expect = 4e-99
 Identities = 244/556 (43%), Positives = 313/556 (56%), Gaps = 65/556 (11%)
 Frame = -1

Query: 1860 MGSSNSRLTGGGRGMKRRLS-------SLLICGSNDTHDH----------DASTSNNAPT 1732
            MGS +SR+  G R  + R++       S L+CG + + D             S++ +   
Sbjct: 1    MGSGSSRM--GRRPSRARVNRSSSNFFSSLLCGGSSSRDSLQMENYPDEIRMSSAEHCDL 58

Query: 1731 VTHDM---------------DVTMAVGDLGSSIKEVSECSDGPSD-----NSSGTIDRKF 1612
            +T+++                 T +V + G+S    S  S+G S      N+  +  +K 
Sbjct: 59   ITNEIWNPAEESSFLSDTRTGSTSSVAETGASSGSKSATSEGTSAEDGFRNTETSNLQKC 118

Query: 1611 SSRSKGSILSPLNVDNNAKVPYF--------ETTGHVGXXXXSVAQQSLGDNLNSVSKAD 1456
             S SK  +++P  V ++     F         TT        +    ++  N ++ +  D
Sbjct: 119  LSESK-ELIAPYQVSDSYSRDEFCRNRSSAEATTSFKDQESSNPVSLNVSANKDAANCID 177

Query: 1455 TG-SEGRSQIRQEVV--SSSTSDNL-----ENTSLGIHASDS--AF----------VPSV 1336
               ++G SQI    +  SSS+S  L     + TS+  H  ++  AF          VP V
Sbjct: 178  NSENKGVSQISPNNMHPSSSSSQELGDSRVDGTSVETHMDEATGAFNSDPVSRRSDVP-V 236

Query: 1335 TEFSLSPQSGTEIAQEAAPVSPGFFTLDSQRNRSNGGVLHVDVVTISSSALFSSSGEVSN 1156
            T  SL    G E  QEA P   GF   + ++ + +  VLHVDVV+ISSS   SS+ + S 
Sbjct: 237  THHSL----GDESLQEAIPSGLGFLVANREQGQGDESVLHVDVVSISSSISSSSNADTST 292

Query: 1155 NEARRNSRRLFWDAFSRRGSRRHNDSRTIVFSSEDPDDLGSHDRWLLDFSGDLFEXXXXX 976
             EARRNSRRLFWDAFSRR SRRH DS TIVFS+++ DDL SH+RWLLDFSGD+F+     
Sbjct: 293  REARRNSRRLFWDAFSRRSSRRHLDSPTIVFSTDNNDDLLSHERWLLDFSGDMFDDGIGG 352

Query: 975  XXXXXXXXXXGTHEGRWHSRSEIWDRFRGGLDESSRRPRYCASGQHPDGTCSCESVLMGG 796
                        +  R HSRSEIW+R RGGLDE  RR   C SG HP G CSCES     
Sbjct: 353  DSGYLGSRIHSLNGRRRHSRSEIWERLRGGLDEHGRRTTLCPSGLHPYGICSCESFSTTE 412

Query: 795  ESSTRGSISRIVMLAEALFEVLDEIHRQPXXXXXSMVSVPAPESVVNSFPLKIHKKHNAA 616
            E+STR SISRIVMLAEALFEVLDEIHRQP     SM+S+PAPESVV++FP++ HKK +  
Sbjct: 413  ETSTRASISRIVMLAEALFEVLDEIHRQPVSLSLSMMSLPAPESVVDAFPIRNHKKEDKV 472

Query: 615  ESIDQDVEQCYICLAEYEEGDKIRVLPCRHEYHMACVDKWLKEIHGVCPLCRGDVCANLA 436
               D DVEQCYICLAEYEEGDKIRVLPC HEYHMACVDKWLKEIHGVCPLCRGDV     
Sbjct: 473  VGSD-DVEQCYICLAEYEEGDKIRVLPCHHEYHMACVDKWLKEIHGVCPLCRGDVRQGTN 531

Query: 435  EGFISNSS*SLYSPEL 388
            +  +S S  S  + E+
Sbjct: 532  DHSVSCSESSAPNSEI 547


>ref|XP_002308375.1| predicted protein [Populus trichocarpa] gi|222854351|gb|EEE91898.1|
            predicted protein [Populus trichocarpa]
          Length = 535

 Score =  356 bits (914), Expect = 1e-95
 Identities = 205/409 (50%), Positives = 251/409 (61%), Gaps = 50/409 (12%)
 Frame = -1

Query: 1494 SLGDNLNSVSKADTG-SEGRSQIRQEVVSSSTSDNLENTSLG-IHASDSAFVPSVTEFSL 1321
            ++  N+++V+  D   ++G SQI   ++  S+SD    + LG  H++D++F   + E + 
Sbjct: 125  NVSTNMDAVNGIDNSENKGFSQIYPHIIHPSSSDP---SRLGDSHSNDASFDNHMGEVTD 181

Query: 1320 SPQSGT------------------EIAQEAAPVSPGFFTLDSQRNRSNGGVLHVDVVTIS 1195
             P S +                  E  Q++     GF   + +++R++G VLHVDVV+IS
Sbjct: 182  IPNSDSDSVTHRPDVRVTFRPTQDESIQDSVSSDLGFLVPNREQDRTDGSVLHVDVVSIS 241

Query: 1194 SSALFSSSGEVSNNEARRNSRRLFWDAFSRRGSRRHNDSRTIVFSSEDPDDLGSHDRWLL 1015
            SS   SS+ + SN+EARRNSRRLFWDAFSRR  RRH DS T VFS+++ DDL SHDRWLL
Sbjct: 242  SSIYSSSTSDTSNHEARRNSRRLFWDAFSRRSFRRHVDSPTTVFSTDNNDDLESHDRWLL 301

Query: 1014 DFSGDLFEXXXXXXXXXXXXXXXGTHEGRWHSRS-------------------------- 913
            +FSGD                  G +E R HSRS                          
Sbjct: 302  NFSGDFLNDGIDNDSRYLGRRIHGLNERRRHSRSEILEIIRLYVDGVDCFLQSSTRPLYS 361

Query: 912  ----EIWDRFRGGLDESSRRPRYCASGQHPDGTCSCESVLMGGESSTRGSISRIVMLAEA 745
                EIW+R  GGLDE+ RR   C SG HPDGTCSCES+LM  E +    ISRIVMLAEA
Sbjct: 362  YCSTEIWERLHGGLDENGRRTTSCPSGLHPDGTCSCESILMTEELNAHRRISRIVMLAEA 421

Query: 744  LFEVLDEIHRQPXXXXXSMVSVPAPESVVNSFPLKIHKKHNAAESIDQDVEQCYICLAEY 565
            LFEVLDEIHRQP     SM+S+PAPES+V+SFPLK HKK +  E  D+D EQCYICLAEY
Sbjct: 422  LFEVLDEIHRQPVSLSLSMMSLPAPESIVDSFPLKNHKKVDKVEGNDED-EQCYICLAEY 480

Query: 564  EEGDKIRVLPCRHEYHMACVDKWLKEIHGVCPLCRGDVCANLAEGFISN 418
            EEGDKIRVLPC HEYHMACVDKWLKEIHGVCPLCRGDV     E  I N
Sbjct: 481  EEGDKIRVLPCHHEYHMACVDKWLKEIHGVCPLCRGDVREGANEPSIPN 529


>ref|XP_003609509.1| RING finger protein [Medicago truncatula] gi|355510564|gb|AES91706.1|
            RING finger protein [Medicago truncatula]
          Length = 545

 Score =  337 bits (865), Expect = 5e-90
 Identities = 190/342 (55%), Positives = 221/342 (64%), Gaps = 6/342 (1%)
 Frame = -1

Query: 1440 RSQIRQEVVSSSTSD-NLE-NTSLGIHASDSAFVPSVTEFSLS----PQSGTEIAQEAAP 1279
            RS I QE  +SS+ + ++E NT  GI    S+   S    +L     P+ G     E  P
Sbjct: 198  RSPISQEYGNSSSGEISVEINTDAGISIHSSSIPVSQASNTLPASQVPEDGAR--HETLP 255

Query: 1278 VSPGFFTLDSQRNRSNGGVLHVDVVTISSSALFSSSGEVSNNEARRNSRRLFWDAFSRRG 1099
               G    + +    N G+  VDVV ISS+ L  S+G+  +++ARRNSRRLFWDAFS+R 
Sbjct: 256  SGLGILVSNREIVHGNDGLFQVDVVAISSNILSGSNGDADDHDARRNSRRLFWDAFSQRS 315

Query: 1098 SRRHNDSRTIVFSSEDPDDLGSHDRWLLDFSGDLFEXXXXXXXXXXXXXXXGTHEGRWHS 919
            SRR  DS TIVFSS   DDLGSHDRW +DF  DL                   +E   +S
Sbjct: 316  SRRLGDSPTIVFSSGGTDDLGSHDRWHVDFDEDLSNYGVGGASGHRGSRIHRLNERVRNS 375

Query: 918  RSEIWDRFRGGLDESSRRPRYCASGQHPDGTCSCESVLMGGESSTRGSISRIVMLAEALF 739
            RSEIW+R RGGLDE  R    C  G H DG CSCES  M  ESSTR SISRIVMLAEALF
Sbjct: 376  RSEIWERLRGGLDEIGRLNTSCPLGLHADGMCSCESFPMAEESSTRSSISRIVMLAEALF 435

Query: 738  EVLDEIHRQPXXXXXSMVSVPAPESVVNSFPLKIHKKHNAAESIDQDVEQCYICLAEYEE 559
            EVLDEIHRQP     S  S+PAPESVV+SFPLK HKK +AA+    D EQCYICLAEYE+
Sbjct: 436  EVLDEIHRQPGSQSLS-TSLPAPESVVDSFPLKSHKKVDAADG-GNDAEQCYICLAEYED 493

Query: 558  GDKIRVLPCRHEYHMACVDKWLKEIHGVCPLCRGDVCANLAE 433
            GD+IRVLPC+HEYHM+CVDKWLKEIHGVCPLCR +VC  L E
Sbjct: 494  GDQIRVLPCKHEYHMSCVDKWLKEIHGVCPLCRSNVCGGLTE 535