BLASTX nr result

ID: Coptis25_contig00003505 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003505
         (1183 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326664.1| predicted protein [Populus trichocarpa] gi|2...   316   8e-84
ref|XP_002531470.1| conserved hypothetical protein [Ricinus comm...   299   8e-79
ref|XP_004152389.1| PREDICTED: deSI-like protein At4g17486-like ...   295   2e-77
ref|XP_002304297.1| predicted protein [Populus trichocarpa] gi|2...   292   1e-76
ref|NP_001241211.1| uncharacterized protein LOC100797619 [Glycin...   290   5e-76

>ref|XP_002326664.1| predicted protein [Populus trichocarpa] gi|222833986|gb|EEE72463.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score =  316 bits (809), Expect = 8e-84
 Identities = 160/232 (68%), Positives = 176/232 (75%), Gaps = 6/232 (2%)
 Frame = -1

Query: 838 MRFLP----SLTISRDQSKNGASSNNRTQLFLNVYDLTPINNYLYWFGLGIFHSGIEVHG 671
           MR  P    S T S  +  NG SS  R  L+LN+YDLTPINNYLYWFGLGIFHSGIEVHG
Sbjct: 1   MRLFPLSSSSSTSSEKEQSNGGSS--RVMLYLNIYDLTPINNYLYWFGLGIFHSGIEVHG 58

Query: 670 MEYAFGAHEYPTSGVFEVEPKSCPGFTFRRSVPLGSTNMSRSEFRSFMEHLSGRYHGDTY 491
           MEY FGAHEYPTSGVFEVEP+SCPGF FRRSV LGSTNMSRSEFRSF+EHLS +YHGD Y
Sbjct: 59  MEYGFGAHEYPTSGVFEVEPRSCPGFIFRRSVLLGSTNMSRSEFRSFIEHLSAKYHGDNY 118

Query: 490 HLIAKNCNHFTEDVCKRLTGKAIPGWVNRLARLVSGSFCNCLLPESIQVTTAIRHLPDHA 311
           HLIAKNCNHFT++VCKRLTGK IPGWVNR+ARL  GSFCNCLLPESIQ+ TA+RHLPDH 
Sbjct: 119 HLIAKNCNHFTDEVCKRLTGKPIPGWVNRMARL--GSFCNCLLPESIQI-TAVRHLPDHP 175

Query: 310 VY--XXXXXXXXXXXXXXXXXXXXXDHQLLTLPTNDVAFLKDKSVRLARELM 161
            +                       +H LLT P  +VAFLK+K VRLAREL+
Sbjct: 176 TFSDDDDGLESVGSSTTSRSEEEGSNHHLLTSPNGEVAFLKEKPVRLARELL 227


>ref|XP_002531470.1| conserved hypothetical protein [Ricinus communis]
           gi|223528924|gb|EEF30920.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 225

 Score =  299 bits (766), Expect = 8e-79
 Identities = 148/228 (64%), Positives = 172/228 (75%), Gaps = 2/228 (0%)
 Frame = -1

Query: 838 MRFLP-SLTISRDQSKNGASSNNRTQLFLNVYDLTPINNYLYWFGLGIFHSGIEVHGMEY 662
           MR  P S ++S   + +     N   L+LN+YDLTP+NNYLYWFGLG+FHSGIEVHGME+
Sbjct: 1   MRLFPLSSSLSSSSTSDKEQQGNGALLYLNIYDLTPVNNYLYWFGLGVFHSGIEVHGMEF 60

Query: 661 AFGAHEYPTSGVFEVEPKSCPGFTFRRSVPLGSTNMSRSEFRSFMEHLSGRYHGDTYHLI 482
            FGAHEY +SGVFEVEPK+CPGF +RRS+ LGST +SRSE RSFMEHLS +YHGDTYHLI
Sbjct: 61  GFGAHEYSSSGVFEVEPKNCPGFIYRRSLLLGSTCLSRSEVRSFMEHLSAKYHGDTYHLI 120

Query: 481 AKNCNHFTEDVCKRLTGKAIPGWVNRLARLVSGSFCNCLLPESIQVTTAIRHLPDHAVY- 305
           AKNCNHFT++VC +LTGK IPGWVNRLAR+  GSFCNCLLPESIQ+ TA+RHLPDH  Y 
Sbjct: 121 AKNCNHFTDEVCMQLTGKPIPGWVNRLARV--GSFCNCLLPESIQI-TAVRHLPDHPAYS 177

Query: 304 XXXXXXXXXXXXXXXXXXXXXDHQLLTLPTNDVAFLKDKSVRLARELM 161
                                DH LLT+P  DVAFLK+K V+LARELM
Sbjct: 178 DDDGLESMGSSMSLESEGEDSDHHLLTVPNGDVAFLKEKPVKLARELM 225


>ref|XP_004152389.1| PREDICTED: deSI-like protein At4g17486-like [Cucumis sativus]
           gi|449488646|ref|XP_004158127.1| PREDICTED: deSI-like
           protein At4g17486-like [Cucumis sativus]
          Length = 226

 Score =  295 bits (754), Expect = 2e-77
 Identities = 151/228 (66%), Positives = 168/228 (73%), Gaps = 4/228 (1%)
 Frame = -1

Query: 838 MRFLPSLTISRDQSKNGASSNNRTQLFLNVYDLTPINNYLYWFGLGIFHSGIEVHGMEYA 659
           MR  P +  S D +++    +    L+LNVYDLTPINNYLYW GLGIFHSGIEVHGMEY 
Sbjct: 1   MRLFP-VGSSPDFTEDKEQGSGHALLYLNVYDLTPINNYLYWVGLGIFHSGIEVHGMEYG 59

Query: 658 FGAHEYPTSGVFEVEPKSCPGFTFRRSVPLGSTNMSRSEFRSFMEHLSGRYHGDTYHLIA 479
           FGAHEYPTSGVFEVEPKSCPGF FRRSV LGST++SR+EFR FMEHLS  YHGDTYHLIA
Sbjct: 60  FGAHEYPTSGVFEVEPKSCPGFIFRRSVLLGSTDLSRAEFRLFMEHLSSEYHGDTYHLIA 119

Query: 478 KNCNHFTEDVCKRLTGKAIPGWVNRLARLVSGSFCNCLLPESIQVTTAIRHLPDHAVY-- 305
           KNCNHFTE+V  RLTGK+IPGWVNRLARL  GSFCNCLLPESIQ+ +A+RHLPDH  Y  
Sbjct: 120 KNCNHFTEEVSMRLTGKSIPGWVNRLARL--GSFCNCLLPESIQI-SAVRHLPDHPAYSD 176

Query: 304 --XXXXXXXXXXXXXXXXXXXXXDHQLLTLPTNDVAFLKDKSVRLARE 167
                                  DH LL  P  DVAFLK+K V++ARE
Sbjct: 177 DDDDDGSESLASSTSARSEDEESDHHLLMSPNGDVAFLKEKPVKIARE 224


>ref|XP_002304297.1| predicted protein [Populus trichocarpa] gi|222841729|gb|EEE79276.1|
           predicted protein [Populus trichocarpa]
          Length = 157

 Score =  292 bits (747), Expect = 1e-76
 Identities = 134/158 (84%), Positives = 145/158 (91%)
 Frame = -1

Query: 778 NNRTQLFLNVYDLTPINNYLYWFGLGIFHSGIEVHGMEYAFGAHEYPTSGVFEVEPKSCP 599
           ++R  L+LN+YDLTPINNYLYWFGLGIFHSGIEVHGMEY FGAHEYPTSGVFEVEP+SCP
Sbjct: 2   SSRVMLYLNIYDLTPINNYLYWFGLGIFHSGIEVHGMEYGFGAHEYPTSGVFEVEPRSCP 61

Query: 598 GFTFRRSVPLGSTNMSRSEFRSFMEHLSGRYHGDTYHLIAKNCNHFTEDVCKRLTGKAIP 419
           GF FRRSV LGSTNMSRSEFRSFMEHLS  YHGDTYHLIAKNCNHFT++VCKRLTGK IP
Sbjct: 62  GFIFRRSVLLGSTNMSRSEFRSFMEHLSAEYHGDTYHLIAKNCNHFTDEVCKRLTGKPIP 121

Query: 418 GWVNRLARLVSGSFCNCLLPESIQVTTAIRHLPDHAVY 305
           GW+NR+ARL  GSFCNCLLPESIQ+ TA+RHLPDH  Y
Sbjct: 122 GWINRMARL--GSFCNCLLPESIQI-TAVRHLPDHPTY 156


>ref|NP_001241211.1| uncharacterized protein LOC100797619 [Glycine max]
           gi|255639835|gb|ACU20210.1| unknown [Glycine max]
          Length = 224

 Score =  290 bits (742), Expect = 5e-76
 Identities = 142/225 (63%), Positives = 168/225 (74%), Gaps = 1/225 (0%)
 Frame = -1

Query: 838 MRFLPSLTISRDQSKNGASSNNRTQLFLNVYDLTPINNYLYWFGLGIFHSGIEVHGMEYA 659
           MR+ P  T S  + +    + +RT ++LNVYDLTPINNYLY FGLGIFHSGI+VH +EY 
Sbjct: 1   MRWFPLSTTSNSERERNRENTSRTSVYLNVYDLTPINNYLYMFGLGIFHSGIQVHDIEYG 60

Query: 658 FGAHEYPTSGVFEVEPKSCPGFTFRRSVPLGSTNMSRSEFRSFMEHLSGRYHGDTYHLIA 479
           FGAHEYP+SGVFEVEP+SCPGF FRRSV LGST+MS SEFR+F+EHLS +YHGDTYHLIA
Sbjct: 61  FGAHEYPSSGVFEVEPRSCPGFIFRRSVLLGSTDMSNSEFRAFIEHLSAKYHGDTYHLIA 120

Query: 478 KNCNHFTEDVCKRLTGKAIPGWVNRLARLVSGSFCNCLLPESIQVTTAIRHLPDHAVY-X 302
           KNCNHFT++VC+ LTG  IPGWVNR+AR+  GSFCNCLLPES+QV  A+RHLP+   +  
Sbjct: 121 KNCNHFTDEVCQHLTGSPIPGWVNRMARV--GSFCNCLLPESLQV-AAVRHLPERLAFDD 177

Query: 301 XXXXXXXXXXXXXXXXXXXXDHQLLTLPTNDVAFLKDKSVRLARE 167
                               +H LLT P  DVAFLK+K VRLARE
Sbjct: 178 DDGSASDGLSASLEGEEDESNHHLLTGPNGDVAFLKEKPVRLARE 222


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