BLASTX nr result

ID: Coptis25_contig00003487 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003487
         (849 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAQ08018.1| endo-1,4-beta-glucanase [Gossypium hirsutum] gi|3...   244   2e-62
gb|AEN70816.1| endo-1,4-beta-glucanase [Gossypium gossypioides]       244   2e-62
gb|AEN70798.1| endo-1,4-beta-glucanase [Gossypium turneri] gi|34...   244   2e-62
gb|ADY68791.1| membrane-anchored endo-1,4-beta-glucanase [Gossyp...   243   4e-62
ref|XP_002299405.1| endo-1,4-beta-glucanase [Populus trichocarpa...   243   4e-62

>gb|AAQ08018.1| endo-1,4-beta-glucanase [Gossypium hirsutum]
           gi|324984021|gb|ADY68793.1| membrane-anchored
           endo-1,4-beta-glucanase [Gossypium raimondii]
           gi|324984025|gb|ADY68795.1| membrane-anchored
           endo-1,4-beta-glucanase [Gossypium hirsutum]
           gi|345103947|gb|AEN70795.1| endo-1,4-beta-glucanase
           [Gossypium thurberi] gi|345103949|gb|AEN70796.1|
           endo-1,4-beta-glucanase [Gossypium laxum]
           gi|345103957|gb|AEN70800.1| endo-1,4-beta-glucanase
           [Gossypium mustelinum] gi|345103983|gb|AEN70813.1|
           endo-1,4-beta-glucanase [Gossypium davidsonii]
           gi|345103985|gb|AEN70814.1| endo-1,4-beta-glucanase
           [Gossypium klotzschianum] gi|345103987|gb|AEN70815.1|
           endo-1,4-beta-glucanase [Gossypium aridum]
           gi|345103991|gb|AEN70817.1| endo-1,4-beta-glucanase
           [Gossypium lobatum] gi|345103993|gb|AEN70818.1|
           endo-1,4-beta-glucanase [Gossypium trilobum]
          Length = 619

 Score =  244 bits (623), Expect = 2e-62
 Identities = 112/141 (79%), Positives = 122/141 (86%), Gaps = 1/141 (0%)
 Frame = +1

Query: 1   DTPGWYCGPNFYSIEVLREFAKTQINYILGENPRKMSYVVGFGNLYPKHVHHRGASIPKN 180
           DTPGWYCGPNFYS +VLREFAKTQI+YILG+NPRKMSYVVGFGN YPKHVHHRGASIPKN
Sbjct: 463 DTPGWYCGPNFYSTDVLREFAKTQIDYILGKNPRKMSYVVGFGNHYPKHVHHRGASIPKN 522

Query: 181 RVRYNCKGGWKWRDSPKPNPNIVVGAMVAGPDKNDGFRDVRTNYNYTEPTXXXXXXXXXX 360
           +++YNCKGGWKWRD+ KPNPN +VGAMVAGPDK+DGFRDVRTNYNYTEPT          
Sbjct: 523 KIKYNCKGGWKWRDTSKPNPNTLVGAMVAGPDKHDGFRDVRTNYNYTEPTLAGNAGLVAA 582

Query: 361 XXXXSGDR-TGIDKNTIFSAV 420
               SGD+ TGIDKNTIFSAV
Sbjct: 583 LVALSGDKATGIDKNTIFSAV 603


>gb|AEN70816.1| endo-1,4-beta-glucanase [Gossypium gossypioides]
          Length = 619

 Score =  244 bits (623), Expect = 2e-62
 Identities = 112/141 (79%), Positives = 122/141 (86%), Gaps = 1/141 (0%)
 Frame = +1

Query: 1   DTPGWYCGPNFYSIEVLREFAKTQINYILGENPRKMSYVVGFGNLYPKHVHHRGASIPKN 180
           DTPGWYCGPNFYS +VLREFAKTQI+YILG+NPRKMSYVVGFGN YPKHVHHRGASIPKN
Sbjct: 463 DTPGWYCGPNFYSTDVLREFAKTQIDYILGKNPRKMSYVVGFGNHYPKHVHHRGASIPKN 522

Query: 181 RVRYNCKGGWKWRDSPKPNPNIVVGAMVAGPDKNDGFRDVRTNYNYTEPTXXXXXXXXXX 360
           +++YNCKGGWKWRD+ KPNPN +VGAMVAGPDK+DGFRDVRTNYNYTEPT          
Sbjct: 523 KIKYNCKGGWKWRDTSKPNPNTLVGAMVAGPDKHDGFRDVRTNYNYTEPTLAGNAGLVAA 582

Query: 361 XXXXSGDR-TGIDKNTIFSAV 420
               SGD+ TGIDKNTIFSAV
Sbjct: 583 LVALSGDKATGIDKNTIFSAV 603


>gb|AEN70798.1| endo-1,4-beta-glucanase [Gossypium turneri]
           gi|345103979|gb|AEN70811.1| endo-1,4-beta-glucanase
           [Gossypium armourianum] gi|345103981|gb|AEN70812.1|
           endo-1,4-beta-glucanase [Gossypium harknessii]
          Length = 619

 Score =  244 bits (623), Expect = 2e-62
 Identities = 112/141 (79%), Positives = 122/141 (86%), Gaps = 1/141 (0%)
 Frame = +1

Query: 1   DTPGWYCGPNFYSIEVLREFAKTQINYILGENPRKMSYVVGFGNLYPKHVHHRGASIPKN 180
           DTPGWYCGPNFYS +VLREFAKTQI+YILG+NPRKMSYVVGFGN YPKHVHHRGASIPKN
Sbjct: 463 DTPGWYCGPNFYSTDVLREFAKTQIDYILGKNPRKMSYVVGFGNHYPKHVHHRGASIPKN 522

Query: 181 RVRYNCKGGWKWRDSPKPNPNIVVGAMVAGPDKNDGFRDVRTNYNYTEPTXXXXXXXXXX 360
           +++YNCKGGWKWRD+ KPNPN +VGAMVAGPDK+DGFRDVRTNYNYTEPT          
Sbjct: 523 KIKYNCKGGWKWRDTSKPNPNTLVGAMVAGPDKHDGFRDVRTNYNYTEPTLAGNAGLVAA 582

Query: 361 XXXXSGDR-TGIDKNTIFSAV 420
               SGD+ TGIDKNTIFSAV
Sbjct: 583 LVALSGDKATGIDKNTIFSAV 603


>gb|ADY68791.1| membrane-anchored endo-1,4-beta-glucanase [Gossypium barbadense]
           gi|345103961|gb|AEN70802.1| endo-1,4-beta-glucanase
           [Gossypium darwinii] gi|345103963|gb|AEN70803.1|
           endo-1,4-beta-glucanase [Gossypium tomentosum]
           gi|345103965|gb|AEN70804.1| endo-1,4-beta-glucanase
           [Gossypium tomentosum] gi|345103969|gb|AEN70806.1|
           endo-1,4-beta-glucanase [Gossypium barbadense var.
           brasiliense] gi|345103973|gb|AEN70808.1|
           endo-1,4-beta-glucanase [Gossypium barbadense var.
           peruvianum]
          Length = 619

 Score =  243 bits (620), Expect = 4e-62
 Identities = 111/141 (78%), Positives = 122/141 (86%), Gaps = 1/141 (0%)
 Frame = +1

Query: 1   DTPGWYCGPNFYSIEVLREFAKTQINYILGENPRKMSYVVGFGNLYPKHVHHRGASIPKN 180
           DTPGWYCGPNFYS +VLREFAKTQI+YILG+NPRK+SYVVGFGN YPKHVHHRGASIPKN
Sbjct: 463 DTPGWYCGPNFYSTDVLREFAKTQIDYILGKNPRKLSYVVGFGNHYPKHVHHRGASIPKN 522

Query: 181 RVRYNCKGGWKWRDSPKPNPNIVVGAMVAGPDKNDGFRDVRTNYNYTEPTXXXXXXXXXX 360
           +++YNCKGGWKWRD+ KPNPN +VGAMVAGPDK+DGFRDVRTNYNYTEPT          
Sbjct: 523 KIKYNCKGGWKWRDTSKPNPNTLVGAMVAGPDKHDGFRDVRTNYNYTEPTLAGNAGLVAA 582

Query: 361 XXXXSGDR-TGIDKNTIFSAV 420
               SGD+ TGIDKNTIFSAV
Sbjct: 583 LVALSGDKATGIDKNTIFSAV 603


>ref|XP_002299405.1| endo-1,4-beta-glucanase [Populus trichocarpa]
           gi|222846663|gb|EEE84210.1| endo-1,4-beta-glucanase
           [Populus trichocarpa]
          Length = 619

 Score =  243 bits (620), Expect = 4e-62
 Identities = 111/141 (78%), Positives = 122/141 (86%), Gaps = 1/141 (0%)
 Frame = +1

Query: 1   DTPGWYCGPNFYSIEVLREFAKTQINYILGENPRKMSYVVGFGNLYPKHVHHRGASIPKN 180
           DTPGWYCGPNFYS +VLR+FAKTQI+YILG+NPRKMSYVVGFGN YPKHVHHRGASIPKN
Sbjct: 463 DTPGWYCGPNFYSTDVLRDFAKTQIDYILGKNPRKMSYVVGFGNHYPKHVHHRGASIPKN 522

Query: 181 RVRYNCKGGWKWRDSPKPNPNIVVGAMVAGPDKNDGFRDVRTNYNYTEPTXXXXXXXXXX 360
           ++RYNCKGGWKWRD+ KPNPN +VGAMVAGPD++DGFRDVRTNYNYTEPT          
Sbjct: 523 KIRYNCKGGWKWRDTTKPNPNTLVGAMVAGPDRHDGFRDVRTNYNYTEPTIAGNAGLVAA 582

Query: 361 XXXXSGDR-TGIDKNTIFSAV 420
               SGD+ TGIDKNTIFSAV
Sbjct: 583 LVALSGDKTTGIDKNTIFSAV 603


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