BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003475
         (1185 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281393.1| PREDICTED: UPF0405 protein C3orf75 homolog [...   296   7e-78
ref|XP_002312051.1| predicted protein [Populus trichocarpa] gi|2...   276   6e-72
ref|XP_002525052.1| conserved hypothetical protein [Ricinus comm...   249   1e-63
ref|XP_004163069.1| PREDICTED: elongator complex protein 6-like ...   247   5e-63
ref|NP_567351.1| elongator protein 6 [Arabidopsis thaliana] gi|7...   246   1e-62

>ref|XP_002281393.1| PREDICTED: UPF0405 protein C3orf75 homolog [Vitis vinifera]
           gi|297736457|emb|CBI25328.3| unnamed protein product
           [Vitis vinifera]
          Length = 256

 Score =  296 bits (758), Expect = 7e-78
 Identities = 151/250 (60%), Positives = 188/250 (75%), Gaps = 9/250 (3%)
 Frame = +1

Query: 178 SLLDEAXXXXXXXXXXX-IEDCVETSGAFILDHFIKRALS---STQGVVLLIALAHPFSH 345
           +LLDEA            IEDCVET+GAF+L H +KR+L+   S+   V+ +A + PFSH
Sbjct: 8   TLLDEALALDWTQPRVIVIEDCVETNGAFVLHHVLKRSLALHTSSTSAVIFLAFSQPFSH 67

Query: 346 YERILRKQGCNLVTQSENSRFFFFDMLKLDCPEG-----AGGLVELYQKIRKAVEVISSH 510
           Y+RILRK GCNLVT  +N RF FF++L L+CP+G     +GGL  LY++I+K +  I+ H
Sbjct: 68  YDRILRKLGCNLVTPKDNKRFVFFNLLTLECPDGDEGKTSGGLPSLYREIQKVI--IALH 125

Query: 511 KHNRSDITIMIDDISLMEVAACASFNYVSDFLHYCHTLTSEVGCSLVVLNHDDIYSSTIA 690
           + NR  ITIMIDDISLMEVAA  S N+V DFLHYCHTLT E GC LV +NH DIYSS   
Sbjct: 126 EENRKSITIMIDDISLMEVAANGSTNHVLDFLHYCHTLTLEFGCLLVTVNHGDIYSSMER 185

Query: 691 PSLMLEMEYLANLVIKVEPLATGLATDVHGQLTVLNKGIIDEHGTSRNRIHNFHFKIKES 870
           P+L+L+MEYLA+++IK EPL+TGLATDVHGQLTVLNKGI +  G SRNR HNFHFK+KE+
Sbjct: 186 PALLLQMEYLADILIKAEPLSTGLATDVHGQLTVLNKGICEGQGNSRNRTHNFHFKVKEN 245

Query: 871 SVDYFYPGSR 900
           SV+ FYPG+R
Sbjct: 246 SVECFYPGTR 255


>ref|XP_002312051.1| predicted protein [Populus trichocarpa] gi|222851871|gb|EEE89418.1|
           predicted protein [Populus trichocarpa]
          Length = 261

 Score =  276 bits (707), Expect = 6e-72
 Identities = 136/232 (58%), Positives = 174/232 (75%), Gaps = 8/232 (3%)
 Frame = +1

Query: 229 IEDCVETSGAFILDHFIKRALSSTQ--GVVLLIALAHPFSHYERILRKQGCNLVTQSENS 402
           IEDCVETSG F+L   +KR LSS      V+ +A +HP SHY+RILRK GCNLV Q EN 
Sbjct: 31  IEDCVETSGCFVLHQLLKRTLSSQSPNNTVIFLAFSHPLSHYDRILRKLGCNLVAQRENG 90

Query: 403 RFFFFDMLKLDCPE------GAGGLVELYQKIRKAVEVISSHKHNRSDITIMIDDISLME 564
           RFFFFDMLKL CP+      G GG   LY KI+  +  +   ++N++  TIMIDD+SLME
Sbjct: 91  RFFFFDMLKLLCPDEKEGKTGKGGFTALYWKIQNTICALP--ENNKNHATIMIDDMSLME 148

Query: 565 VAACASFNYVSDFLHYCHTLTSEVGCSLVVLNHDDIYSSTIAPSLMLEMEYLANLVIKVE 744
           VAA  S ++V +F+HYCHTLTSE+GCSL+ LNH+DIY+S   P+ ML+ +YL +++IK E
Sbjct: 149 VAAHGSSDHVLNFMHYCHTLTSELGCSLITLNHEDIYTSMERPTFMLQTKYLVDVLIKAE 208

Query: 745 PLATGLATDVHGQLTVLNKGIIDEHGTSRNRIHNFHFKIKESSVDYFYPGSR 900
           PLATGLA DVHGQLTVLN+   +  G+S+N+I NFHFK+KE+SV+YFYPG+R
Sbjct: 209 PLATGLAADVHGQLTVLNRDFCNVKGSSKNKISNFHFKVKENSVEYFYPGTR 260


>ref|XP_002525052.1| conserved hypothetical protein [Ricinus communis]
           gi|223535633|gb|EEF37299.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 284

 Score =  249 bits (635), Expect = 1e-63
 Identities = 131/253 (51%), Positives = 166/253 (65%), Gaps = 26/253 (10%)
 Frame = +1

Query: 229 IEDCVETSGAFILDHFIKRALSSTQ-GVVLLIALAHPFSHYERILRKQGCNLVTQSENSR 405
           IED VETSG+F+L+H IKR LS     V++ +A ++PFSHY+RILRK GCNL    +  R
Sbjct: 32  IEDRVETSGSFLLNHLIKRILSPNSFKVIIFLAFSNPFSHYDRILRKLGCNLAAHKDCGR 91

Query: 406 FFFFDMLKLDCP-------------------------EGAGGLVELYQKIRKAVEVISSH 510
           FFFFDML L C                              G + L+ +I+K +  +  +
Sbjct: 92  FFFFDMLMLQCSGEKWLNLFDHKSFEFNSLLDRNEGNSNKAGFITLFGEIQKVICALPEN 151

Query: 511 KHNRSDITIMIDDISLMEVAACASFNYVSDFLHYCHTLTSEVGCSLVVLNHDDIYSSTIA 690
             N   +TIMIDD+SLMEVAA  S + V DFLHYCHTLTS+ GCSLV LNH+DIYS+   
Sbjct: 152 YKNH--VTIMIDDVSLMEVAAYGSSDRVLDFLHYCHTLTSDFGCSLVTLNHEDIYSTMER 209

Query: 691 PSLMLEMEYLANLVIKVEPLATGLATDVHGQLTVLNKGIIDEHGTSRNRIHNFHFKIKES 870
            + +L+MEYLA+++IK EPLATGLATDVHGQLTVL+ GI    G  +N+I NF F +KE+
Sbjct: 210 RAFILQMEYLADILIKAEPLATGLATDVHGQLTVLSTGICCRKGNLKNKISNFQFMVKEN 269

Query: 871 SVDYFYPGSRNLG 909
           SV+YFYPGSR  G
Sbjct: 270 SVEYFYPGSRTCG 282


>ref|XP_004163069.1| PREDICTED: elongator complex protein 6-like [Cucumis sativus]
          Length = 260

 Score =  247 bits (630), Expect = 5e-63
 Identities = 129/232 (55%), Positives = 164/232 (70%), Gaps = 8/232 (3%)
 Frame = +1

Query: 229 IEDCVETSGAFILDHFIKRALSS--TQGVVLLIALAHPFSHYERILRKQGCNLVTQSENS 402
           +EDCVETSGAF+L H +KRA SS  +  VV+ +A +  F HY+RILRK GCNL  Q ++ 
Sbjct: 31  VEDCVETSGAFVLHHLLKRAFSSPHSSNVVIFLAFSQSFIHYDRILRKLGCNLAAQRDSG 90

Query: 403 RFFFFDMLKLDCPE------GAGGLVELYQKIRKAVEVISSHKHNRSDITIMIDDISLME 564
           RF FFDML L C +      G G LV LY KI++AV  +   + N+  ITI+IDDISL+E
Sbjct: 91  RFVFFDMLTLGCSDRSGKETGEGVLVGLYCKIQRAVHALI--QENKKHITIVIDDISLLE 148

Query: 565 VAACASFNYVSDFLHYCHTLTSEVGCSLVVLNHDDIYSSTIAPSLMLEMEYLANLVIKVE 744
           VAA  S N+V DFLHYCHTL SEVGCS++ L+H+D+Y     P L L++EYLA+++IKV 
Sbjct: 149 VAANGSSNHVLDFLHYCHTLLSEVGCSIIALDHEDVYMDIERP-LSLQLEYLADVLIKVG 207

Query: 745 PLATGLATDVHGQLTVLNKGIIDEHGTSRNRIHNFHFKIKESSVDYFYPGSR 900
           PLATG+A DVHGQLTVLNK +       RNR+ NF F IKE+  ++FY GSR
Sbjct: 208 PLATGIAKDVHGQLTVLNKPVEGLQDKLRNRVQNFQFYIKENGTEFFYSGSR 259


>ref|NP_567351.1| elongator protein 6 [Arabidopsis thaliana]
           gi|75154680|sp|Q8L9Y2.1|ELP6_ARATH RecName:
           Full=Elongator complex protein 6; Short=AtELP6; AltName:
           Full=Elongator component 6; AltName: Full=UPF0405
           protein ELP6 gi|21593728|gb|AAM65695.1| unknown
           [Arabidopsis thaliana] gi|87116610|gb|ABD19669.1|
           At4g10090 [Arabidopsis thaliana]
           gi|110735719|dbj|BAE99839.1| hypothetical protein
           [Arabidopsis thaliana] gi|332657437|gb|AEE82837.1|
           elongator protein 6 [Arabidopsis thaliana]
          Length = 262

 Score =  246 bits (627), Expect = 1e-62
 Identities = 125/234 (53%), Positives = 168/234 (71%), Gaps = 9/234 (3%)
 Frame = +1

Query: 229 IEDCVETSGAFILDHFIKRALSSTQGVVLL-IALAHPFSHYERILRKQGCNLVTQSENSR 405
           IEDCVETSG+F+L   +KR LSS     L+ +A A PFSHY+RILRK GCNL T   N+R
Sbjct: 31  IEDCVETSGSFVLHQLMKRVLSSNSSDALIFLAFARPFSHYDRILRKLGCNLATHKSNNR 90

Query: 406 FFFFDMLKLDCPEG------AGGLVELYQKIRKAVEVISSHKHNRSDITIMIDDISLMEV 567
             FFDML + C +G         + +L+++I++ V  + S      +IT+M+DD+SL+E+
Sbjct: 91  LVFFDMLMVKCSDGDQMEDNVSAVAKLFREIQETVRKLQSV--TSGNITVMVDDMSLLEI 148

Query: 568 AACAS-FNYVSDFLHYCHTLTSEVGCSLVVLNHDDIYSSTIAPSLMLEMEYLANLVIKVE 744
           A   S  ++V DFLHYCHTL+SE  CSLV+LNH+DIY+S   P+ +L+M  LA++VIK E
Sbjct: 149 ATTGSNSDHVLDFLHYCHTLSSESNCSLVILNHEDIYASMERPAFLLQMVCLADVVIKAE 208

Query: 745 PLATGLATDVHGQLTVLNKGIIDE-HGTSRNRIHNFHFKIKESSVDYFYPGSRN 903
           PLA+GLA DVHGQLTVLNKGI +   G+SRN++ NF F+IKE+ +DYFYPG R+
Sbjct: 209 PLASGLANDVHGQLTVLNKGISNSGRGSSRNKLQNFQFRIKENGIDYFYPGCRS 262