BLASTX nr result
ID: Coptis25_contig00003466
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00003466
(1408 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN68249.1| hypothetical protein VITISV_020126 [Vitis vinifera] 726 0.0
ref|XP_002281199.1| PREDICTED: protein COBRA isoform 1 [Vitis vi... 726 0.0
emb|CBI16946.3| unnamed protein product [Vitis vinifera] 726 0.0
ref|XP_002264600.1| PREDICTED: protein COBRA [Vitis vinifera] gi... 719 0.0
ref|XP_004138217.1| PREDICTED: protein COBRA-like [Cucumis sativ... 695 0.0
>emb|CAN68249.1| hypothetical protein VITISV_020126 [Vitis vinifera]
Length = 469
Score = 726 bits (1874), Expect(2) = 0.0
Identities = 326/371 (87%), Positives = 348/371 (93%)
Frame = +3
Query: 294 IKWDIMSWTPDGYVATVTMYNFQQYRHIQAPGWALGWTWAKKEVIWSMVGSQTTEQGDCS 473
IKWDIMSWTPDGYVA VTMYNFQQYRHIQ+PGW+L WTWAKKEVIWSM+G QTTEQGDCS
Sbjct: 48 IKWDIMSWTPDGYVAVVTMYNFQQYRHIQSPGWSLQWTWAKKEVIWSMLGGQTTEQGDCS 107
Query: 474 RFKGNIPHCCKKDPMVVDLWPGTPYNQQIANCCKGGVLNSWAQDPGNAASSFQISVGAAG 653
RFKGN+PHCCKKDP VVDL PGTPYNQQIANCCKGGV++SW QDP NAASSFQ+SVG+AG
Sbjct: 108 RFKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVVSSWVQDPANAASSFQVSVGSAG 167
Query: 654 TTNKTVKVPKNFTLKAPGPGYTCGPAKVVKSSKFVTADLRRVTQALMTWNITCTYSQFLS 833
TTNKTV+VPKNFTLKAPGPGYTCGPAK+VK ++FVT D RRVTQALMTWN+TCTYSQFLS
Sbjct: 168 TTNKTVRVPKNFTLKAPGPGYTCGPAKIVKPTRFVTQDGRRVTQALMTWNVTCTYSQFLS 227
Query: 834 QKTPTCCVSLSSFYNDTIVDCPTCTCGCQNNITQPGSCVMGDSPYLESAIAGQGKNSYTP 1013
QKTPTCCVSLSSFYNDTIV CPTCTCGCQNNITQPGSCV DSPYL S ++G GKNSYTP
Sbjct: 228 QKTPTCCVSLSSFYNDTIVPCPTCTCGCQNNITQPGSCVEEDSPYLASVVSGSGKNSYTP 287
Query: 1014 LVQCTNHMCPIRVHWHVKLNYKEYWRVKITITNFNYRMNYTQWNLVVQHPNLNNLTKIFS 1193
LVQCT HMCPIRVHWHVKL+YKEYWRVK+TITNFNYRMNYTQWNLVVQHPN +NLT+IFS
Sbjct: 288 LVQCTKHMCPIRVHWHVKLSYKEYWRVKVTITNFNYRMNYTQWNLVVQHPNFDNLTQIFS 347
Query: 1194 FNYKSLMPYASINDTAMLWGVKFYNDLLMQAGRLGNVQSEFLFRKDPETFTFDKGWAFPR 1373
FNYKSL PYA+INDTAMLWGVKFYNDLL+QAG LGNVQSE LFRKD TFTF+KGWAFPR
Sbjct: 348 FNYKSLTPYAAINDTAMLWGVKFYNDLLVQAGPLGNVQSELLFRKDKSTFTFEKGWAFPR 407
Query: 1374 RIYFNGDNCVM 1406
RIYFNGDNCVM
Sbjct: 408 RIYFNGDNCVM 418
Score = 34.3 bits (77), Expect(2) = 0.0
Identities = 20/46 (43%), Positives = 21/46 (45%)
Frame = +1
Query: 82 MGFSLFSITRSIXXXXXXXXXXXXXXXXXXXXXXEAYDALDPNGNI 219
MGF L I+RSI EAYDALDPNGNI
Sbjct: 1 MGFCLSLISRSISSFCGCTILLLFLLSCSCFTSTEAYDALDPNGNI 46
>ref|XP_002281199.1| PREDICTED: protein COBRA isoform 1 [Vitis vinifera]
Length = 456
Score = 726 bits (1874), Expect(2) = 0.0
Identities = 326/371 (87%), Positives = 348/371 (93%)
Frame = +3
Query: 294 IKWDIMSWTPDGYVATVTMYNFQQYRHIQAPGWALGWTWAKKEVIWSMVGSQTTEQGDCS 473
IKWDIMSWTPDGYVA VTMYNFQQYRHIQ+PGW+L WTWAKKEVIWSM+G QTTEQGDCS
Sbjct: 48 IKWDIMSWTPDGYVAVVTMYNFQQYRHIQSPGWSLQWTWAKKEVIWSMLGGQTTEQGDCS 107
Query: 474 RFKGNIPHCCKKDPMVVDLWPGTPYNQQIANCCKGGVLNSWAQDPGNAASSFQISVGAAG 653
RFKGN+PHCCKKDP VVDL PGTPYNQQIANCCKGGV++SW QDP NAASSFQ+SVG+AG
Sbjct: 108 RFKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVVSSWVQDPANAASSFQVSVGSAG 167
Query: 654 TTNKTVKVPKNFTLKAPGPGYTCGPAKVVKSSKFVTADLRRVTQALMTWNITCTYSQFLS 833
TTNKTV+VPKNFTLKAPGPGYTCGPAK+VK ++FVT D RRVTQALMTWN+TCTYSQFLS
Sbjct: 168 TTNKTVRVPKNFTLKAPGPGYTCGPAKIVKPTRFVTQDGRRVTQALMTWNVTCTYSQFLS 227
Query: 834 QKTPTCCVSLSSFYNDTIVDCPTCTCGCQNNITQPGSCVMGDSPYLESAIAGQGKNSYTP 1013
QKTPTCCVSLSSFYNDTIV CPTCTCGCQNNITQPGSCV DSPYL S ++G GKNSYTP
Sbjct: 228 QKTPTCCVSLSSFYNDTIVPCPTCTCGCQNNITQPGSCVEEDSPYLASVVSGSGKNSYTP 287
Query: 1014 LVQCTNHMCPIRVHWHVKLNYKEYWRVKITITNFNYRMNYTQWNLVVQHPNLNNLTKIFS 1193
LVQCT HMCPIRVHWHVKL+YKEYWRVK+TITNFNYRMNYTQWNLVVQHPN +NLT+IFS
Sbjct: 288 LVQCTKHMCPIRVHWHVKLSYKEYWRVKVTITNFNYRMNYTQWNLVVQHPNFDNLTQIFS 347
Query: 1194 FNYKSLMPYASINDTAMLWGVKFYNDLLMQAGRLGNVQSEFLFRKDPETFTFDKGWAFPR 1373
FNYKSL PYA+INDTAMLWGVKFYNDLL+QAG LGNVQSE LFRKD TFTF+KGWAFPR
Sbjct: 348 FNYKSLTPYAAINDTAMLWGVKFYNDLLVQAGPLGNVQSELLFRKDKSTFTFEKGWAFPR 407
Query: 1374 RIYFNGDNCVM 1406
RIYFNGDNCVM
Sbjct: 408 RIYFNGDNCVM 418
Score = 34.3 bits (77), Expect(2) = 0.0
Identities = 20/46 (43%), Positives = 21/46 (45%)
Frame = +1
Query: 82 MGFSLFSITRSIXXXXXXXXXXXXXXXXXXXXXXEAYDALDPNGNI 219
MGF L I+RSI EAYDALDPNGNI
Sbjct: 1 MGFCLSLISRSISSFCGCTILLLFLLSCSCFTSTEAYDALDPNGNI 46
>emb|CBI16946.3| unnamed protein product [Vitis vinifera]
Length = 436
Score = 726 bits (1874), Expect(2) = 0.0
Identities = 326/371 (87%), Positives = 348/371 (93%)
Frame = +3
Query: 294 IKWDIMSWTPDGYVATVTMYNFQQYRHIQAPGWALGWTWAKKEVIWSMVGSQTTEQGDCS 473
IKWDIMSWTPDGYVA VTMYNFQQYRHIQ+PGW+L WTWAKKEVIWSM+G QTTEQGDCS
Sbjct: 48 IKWDIMSWTPDGYVAVVTMYNFQQYRHIQSPGWSLQWTWAKKEVIWSMLGGQTTEQGDCS 107
Query: 474 RFKGNIPHCCKKDPMVVDLWPGTPYNQQIANCCKGGVLNSWAQDPGNAASSFQISVGAAG 653
RFKGN+PHCCKKDP VVDL PGTPYNQQIANCCKGGV++SW QDP NAASSFQ+SVG+AG
Sbjct: 108 RFKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVVSSWVQDPANAASSFQVSVGSAG 167
Query: 654 TTNKTVKVPKNFTLKAPGPGYTCGPAKVVKSSKFVTADLRRVTQALMTWNITCTYSQFLS 833
TTNKTV+VPKNFTLKAPGPGYTCGPAK+VK ++FVT D RRVTQALMTWN+TCTYSQFLS
Sbjct: 168 TTNKTVRVPKNFTLKAPGPGYTCGPAKIVKPTRFVTQDGRRVTQALMTWNVTCTYSQFLS 227
Query: 834 QKTPTCCVSLSSFYNDTIVDCPTCTCGCQNNITQPGSCVMGDSPYLESAIAGQGKNSYTP 1013
QKTPTCCVSLSSFYNDTIV CPTCTCGCQNNITQPGSCV DSPYL S ++G GKNSYTP
Sbjct: 228 QKTPTCCVSLSSFYNDTIVPCPTCTCGCQNNITQPGSCVEEDSPYLASVVSGSGKNSYTP 287
Query: 1014 LVQCTNHMCPIRVHWHVKLNYKEYWRVKITITNFNYRMNYTQWNLVVQHPNLNNLTKIFS 1193
LVQCT HMCPIRVHWHVKL+YKEYWRVK+TITNFNYRMNYTQWNLVVQHPN +NLT+IFS
Sbjct: 288 LVQCTKHMCPIRVHWHVKLSYKEYWRVKVTITNFNYRMNYTQWNLVVQHPNFDNLTQIFS 347
Query: 1194 FNYKSLMPYASINDTAMLWGVKFYNDLLMQAGRLGNVQSEFLFRKDPETFTFDKGWAFPR 1373
FNYKSL PYA+INDTAMLWGVKFYNDLL+QAG LGNVQSE LFRKD TFTF+KGWAFPR
Sbjct: 348 FNYKSLTPYAAINDTAMLWGVKFYNDLLVQAGPLGNVQSELLFRKDKSTFTFEKGWAFPR 407
Query: 1374 RIYFNGDNCVM 1406
RIYFNGDNCVM
Sbjct: 408 RIYFNGDNCVM 418
Score = 34.3 bits (77), Expect(2) = 0.0
Identities = 20/46 (43%), Positives = 21/46 (45%)
Frame = +1
Query: 82 MGFSLFSITRSIXXXXXXXXXXXXXXXXXXXXXXEAYDALDPNGNI 219
MGF L I+RSI EAYDALDPNGNI
Sbjct: 1 MGFCLSLISRSISSFCGCTILLLFLLSCSCFTSTEAYDALDPNGNI 46
>ref|XP_002264600.1| PREDICTED: protein COBRA [Vitis vinifera]
gi|297734083|emb|CBI15330.3| unnamed protein product
[Vitis vinifera]
Length = 456
Score = 719 bits (1856), Expect(2) = 0.0
Identities = 321/371 (86%), Positives = 345/371 (92%)
Frame = +3
Query: 294 IKWDIMSWTPDGYVATVTMYNFQQYRHIQAPGWALGWTWAKKEVIWSMVGSQTTEQGDCS 473
IKWD+MSWTPDGYVA VTM+NFQQYRHIQAPGW+LGW+WAKKEVIWSM+G QTTEQGDCS
Sbjct: 48 IKWDVMSWTPDGYVAVVTMFNFQQYRHIQAPGWSLGWSWAKKEVIWSMMGGQTTEQGDCS 107
Query: 474 RFKGNIPHCCKKDPMVVDLWPGTPYNQQIANCCKGGVLNSWAQDPGNAASSFQISVGAAG 653
RFKGN+PHCCKKDP VVDL PGTPYNQQIANCCKGGV+NSW QDP NAASSFQ+SVGAAG
Sbjct: 108 RFKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVINSWVQDPANAASSFQVSVGAAG 167
Query: 654 TTNKTVKVPKNFTLKAPGPGYTCGPAKVVKSSKFVTADLRRVTQALMTWNITCTYSQFLS 833
TTNKTVK+PKNFTL+APGPGYTCGPAK+VK +KF TAD RRVTQALMTWN+TCTYSQFL+
Sbjct: 168 TTNKTVKLPKNFTLRAPGPGYTCGPAKIVKPTKFTTADQRRVTQALMTWNVTCTYSQFLA 227
Query: 834 QKTPTCCVSLSSFYNDTIVDCPTCTCGCQNNITQPGSCVMGDSPYLESAIAGQGKNSYTP 1013
QKTPTCCVSLSSFYN+TIV CPTCTCGCQNN+T PGSCV ++PYL S + G GK SY P
Sbjct: 228 QKTPTCCVSLSSFYNNTIVSCPTCTCGCQNNLTHPGSCVDPNNPYLASVVEGSGKTSYQP 287
Query: 1014 LVQCTNHMCPIRVHWHVKLNYKEYWRVKITITNFNYRMNYTQWNLVVQHPNLNNLTKIFS 1193
LVQCT+HMCPIRVHWHVKLNYK+YWRVKITITNFNYRMNYTQWNLVVQHPN +NLT+IFS
Sbjct: 288 LVQCTSHMCPIRVHWHVKLNYKDYWRVKITITNFNYRMNYTQWNLVVQHPNFDNLTQIFS 347
Query: 1194 FNYKSLMPYASINDTAMLWGVKFYNDLLMQAGRLGNVQSEFLFRKDPETFTFDKGWAFPR 1373
FNYKSL PYA+INDTAMLWGVKFYNDLL QAG LGNVQSE LFRKD TFTFDKGWAFPR
Sbjct: 348 FNYKSLTPYAAINDTAMLWGVKFYNDLLSQAGPLGNVQSELLFRKDKATFTFDKGWAFPR 407
Query: 1374 RIYFNGDNCVM 1406
RIYFNGDNCVM
Sbjct: 408 RIYFNGDNCVM 418
Score = 27.7 bits (60), Expect(2) = 0.0
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = +1
Query: 82 MGFSLFSITRSIXXXXXXXXXXXXXXXXXXXXXXEAYDALDPNGNI 219
M F SI RSI EAYD+LDP GNI
Sbjct: 1 MEFFFTSIARSITKLSSYAILLVLLFSCSIFTSTEAYDSLDPEGNI 46
>ref|XP_004138217.1| PREDICTED: protein COBRA-like [Cucumis sativus]
gi|449529459|ref|XP_004171717.1| PREDICTED: protein
COBRA-like [Cucumis sativus]
Length = 455
Score = 695 bits (1794), Expect(2) = 0.0
Identities = 312/372 (83%), Positives = 339/372 (91%), Gaps = 1/372 (0%)
Frame = +3
Query: 294 IKWDIMSWTPDGYVATVTMYNFQQYRHIQAPGWALGWTWAKKEVIWSMVGSQTTEQGDCS 473
IKWD+MSWTPDGYVA VTMYNFQQYRHIQAPGW LGWTWAKKEVIWSM+GSQTTEQGDCS
Sbjct: 48 IKWDVMSWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCS 107
Query: 474 RFKGNIPHCCKKDPMVVDLWPGTPYNQQIANCCKGGVLNSWAQDPGNAASSFQISVGAAG 653
RFKGN PHCCKKDP VVDL PGTPYNQQIANCCKGGV+NSWAQDP NAASSFQ+SVG+AG
Sbjct: 108 RFKGNTPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVINSWAQDPANAASSFQVSVGSAG 167
Query: 654 TTNKTVKVPKNFTLKAPGPGYTCGPAKVVKSSKFVTADLRRVTQALMTWNITCTYSQFLS 833
T+NKTVK+PKNFTLKAPGPGYTCGPAK+V+ +KFV+ D RRVTQALMTWN+TCTYSQFL+
Sbjct: 168 TSNKTVKLPKNFTLKAPGPGYTCGPAKIVRPTKFVSGDKRRVTQALMTWNVTCTYSQFLA 227
Query: 834 QKTPTCCVSLSSFYNDTIVDCPTCTCGCQNNITQPGSCVMGDSPYLESAIAGQGKN-SYT 1010
QKTPTCCVSLSSFYNDTIV+CPTCTCGCQNN GSCV DSP+L S ++ K+ +
Sbjct: 228 QKTPTCCVSLSSFYNDTIVNCPTCTCGCQNNTAGSGSCVDPDSPFLASVVSAPDKSGNNP 287
Query: 1011 PLVQCTNHMCPIRVHWHVKLNYKEYWRVKITITNFNYRMNYTQWNLVVQHPNLNNLTKIF 1190
PLVQCT+HMCPIRVHWHVKLNYK+YWRVKITITNFNYRMNYT WNLVVQHPN +N+TK+F
Sbjct: 288 PLVQCTSHMCPIRVHWHVKLNYKDYWRVKITITNFNYRMNYTLWNLVVQHPNFDNITKLF 347
Query: 1191 SFNYKSLMPYASINDTAMLWGVKFYNDLLMQAGRLGNVQSEFLFRKDPETFTFDKGWAFP 1370
SFNYKSL PY +NDTAMLWGVKFYNDLL QAG LGNVQSE LF+KD TFTFDKGWAFP
Sbjct: 348 SFNYKSLSPYGDLNDTAMLWGVKFYNDLLNQAGPLGNVQSELLFQKDQNTFTFDKGWAFP 407
Query: 1371 RRIYFNGDNCVM 1406
RR+YFNGDNCVM
Sbjct: 408 RRVYFNGDNCVM 419
Score = 29.6 bits (65), Expect(2) = 0.0
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +1
Query: 184 EAYDALDPNGNI 219
EAYDALDPNGNI
Sbjct: 35 EAYDALDPNGNI 46