BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003461
         (465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16056.3| unnamed protein product [Vitis vinifera]              190   1e-46
ref|XP_002282278.1| PREDICTED: eukaryotic translation initiation...   190   1e-46
ref|NP_001048347.1| Os02g0788400 [Oryza sativa Japonica Group] g...   189   2e-46
ref|NP_001131267.1| uncharacterized protein LOC100192580 [Zea ma...   189   3e-46
ref|XP_002444962.1| hypothetical protein SORBIDRAFT_07g001980 [S...   188   3e-46

>emb|CBI16056.3| unnamed protein product [Vitis vinifera]
          Length = 193

 Score =  190 bits (482), Expect = 1e-46
 Identities = 90/109 (82%), Positives = 99/109 (90%)
 Frame = -3

Query: 463 SKGAYVPPSQRAGADRSGQDMRRRNDENSVRVTNLSEDTREPDLQDLFSTFGPVSRVYIA 284
           SKG YVPP  RAGA+R+G +MRRRN+ENSVRVTNLSEDTREPDL +LF TFGPVSRVY+A
Sbjct: 85  SKGTYVPPGMRAGAERTGTEMRRRNEENSVRVTNLSEDTREPDLHELFRTFGPVSRVYVA 144

Query: 283 YDQKTGMSRGFGFVNFVHKGDAEKAIAKLNGYGYDNLILRVEWAAPRTN 137
            DQKTGMSRGFGFVNFV+K DAE+AI KLNGYGYDNLILRVEWA PR+N
Sbjct: 145 VDQKTGMSRGFGFVNFVNKEDAERAINKLNGYGYDNLILRVEWATPRSN 193


>ref|XP_002282278.1| PREDICTED: eukaryotic translation initiation factor 3 subunit G-B
           [Vitis vinifera]
          Length = 296

 Score =  190 bits (482), Expect = 1e-46
 Identities = 90/109 (82%), Positives = 99/109 (90%)
 Frame = -3

Query: 463 SKGAYVPPSQRAGADRSGQDMRRRNDENSVRVTNLSEDTREPDLQDLFSTFGPVSRVYIA 284
           SKG YVPP  RAGA+R+G +MRRRN+ENSVRVTNLSEDTREPDL +LF TFGPVSRVY+A
Sbjct: 188 SKGTYVPPGMRAGAERTGTEMRRRNEENSVRVTNLSEDTREPDLHELFRTFGPVSRVYVA 247

Query: 283 YDQKTGMSRGFGFVNFVHKGDAEKAIAKLNGYGYDNLILRVEWAAPRTN 137
            DQKTGMSRGFGFVNFV+K DAE+AI KLNGYGYDNLILRVEWA PR+N
Sbjct: 248 VDQKTGMSRGFGFVNFVNKEDAERAINKLNGYGYDNLILRVEWATPRSN 296


>ref|NP_001048347.1| Os02g0788400 [Oryza sativa Japonica Group]
           gi|47497762|dbj|BAD19862.1| putative initiation factor
           3g [Oryza sativa Japonica Group]
           gi|113537878|dbj|BAF10261.1| Os02g0788400 [Oryza sativa
           Japonica Group] gi|125583954|gb|EAZ24885.1| hypothetical
           protein OsJ_08663 [Oryza sativa Japonica Group]
           gi|215737185|dbj|BAG96114.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215765721|dbj|BAG87418.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218191717|gb|EEC74144.1| hypothetical protein
           OsI_09223 [Oryza sativa Indica Group]
          Length = 289

 Score =  189 bits (481), Expect = 2e-46
 Identities = 93/109 (85%), Positives = 98/109 (89%), Gaps = 1/109 (0%)
 Frame = -3

Query: 460 KGAYVPPSQRAGA-DRSGQDMRRRNDENSVRVTNLSEDTREPDLQDLFSTFGPVSRVYIA 284
           KGAYVPPS R+GA DR G DMRRRNDENSVRVTNLSEDTREPDL +LF TFGPVSRVY+A
Sbjct: 181 KGAYVPPSMRSGAVDRVGHDMRRRNDENSVRVTNLSEDTREPDLLELFRTFGPVSRVYVA 240

Query: 283 YDQKTGMSRGFGFVNFVHKGDAEKAIAKLNGYGYDNLILRVEWAAPRTN 137
            DQKTG SRGFGFVNFVH+ DAEKAI+KLNGYGYDNLILRVEWA PR N
Sbjct: 241 VDQKTGASRGFGFVNFVHREDAEKAISKLNGYGYDNLILRVEWATPRPN 289


>ref|NP_001131267.1| uncharacterized protein LOC100192580 [Zea mays]
           gi|194691034|gb|ACF79601.1| unknown [Zea mays]
           gi|195655121|gb|ACG47028.1| eukaryotic translation
           initiation factor 3 subunit 4 [Zea mays]
           gi|413921416|gb|AFW61348.1| eukaryotic translation
           initiation factor 3 subunit 4 [Zea mays]
          Length = 287

 Score =  189 bits (479), Expect = 3e-46
 Identities = 90/109 (82%), Positives = 96/109 (88%)
 Frame = -3

Query: 463 SKGAYVPPSQRAGADRSGQDMRRRNDENSVRVTNLSEDTREPDLQDLFSTFGPVSRVYIA 284
           +KGAYVPP+ R GADR+G  MRRRNDENSVRVTNLSEDTREPDL +LF  FGPVSRVY+A
Sbjct: 179 AKGAYVPPTMRGGADRTGDSMRRRNDENSVRVTNLSEDTREPDLLELFRAFGPVSRVYVA 238

Query: 283 YDQKTGMSRGFGFVNFVHKGDAEKAIAKLNGYGYDNLILRVEWAAPRTN 137
            DQKTG SRGFGFVNFVH+ DAEKAI KLNGYGYDNLILRVEWA PR N
Sbjct: 239 VDQKTGSSRGFGFVNFVHREDAEKAINKLNGYGYDNLILRVEWATPRPN 287


>ref|XP_002444962.1| hypothetical protein SORBIDRAFT_07g001980 [Sorghum bicolor]
           gi|241941312|gb|EES14457.1| hypothetical protein
           SORBIDRAFT_07g001980 [Sorghum bicolor]
          Length = 290

 Score =  188 bits (478), Expect = 3e-46
 Identities = 90/108 (83%), Positives = 96/108 (88%)
 Frame = -3

Query: 460 KGAYVPPSQRAGADRSGQDMRRRNDENSVRVTNLSEDTREPDLQDLFSTFGPVSRVYIAY 281
           KGAYVPP+ R GADR+G  MRRRNDENSVRVTNLSEDTREPDL +LF  FGPVSRVY+A 
Sbjct: 183 KGAYVPPTMRGGADRTGDVMRRRNDENSVRVTNLSEDTREPDLLELFRAFGPVSRVYVAV 242

Query: 280 DQKTGMSRGFGFVNFVHKGDAEKAIAKLNGYGYDNLILRVEWAAPRTN 137
           DQKTG SRGFGFVNFVH+ DAEKAI+KLNGYGYDNLILRVEWA PR N
Sbjct: 243 DQKTGSSRGFGFVNFVHREDAEKAISKLNGYGYDNLILRVEWATPRPN 290