BLASTX nr result

ID: Coptis25_contig00003456 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003456
         (1123 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280458.1| PREDICTED: protein C20orf11 homolog [Vitis v...   342   8e-92
ref|NP_001239946.1| uncharacterized protein LOC100801338 [Glycin...   340   3e-91
emb|CBI19773.3| unnamed protein product [Vitis vinifera]              340   3e-91
dbj|BAJ53170.1| JHL18I08.4 [Jatropha curcas]                          339   6e-91
ref|XP_003527884.1| PREDICTED: UPF0559 protein v1g247787-like [G...   332   1e-88

>ref|XP_002280458.1| PREDICTED: protein C20orf11 homolog [Vitis vinifera]
          Length = 216

 Score =  342 bits (878), Expect = 8e-92
 Identities = 173/220 (78%), Positives = 190/220 (86%), Gaps = 1/220 (0%)
 Frame = -1

Query: 1051 MMDIDTDPPPRQFDQVAINDNDVRNIVLSYLVHNCFKETAESFIACTGMKQPADFPVGID 872
            MMD+D    PRQ++  AIND+D+ NIVLSYLVHNCFKET ESFI+CTGMKQPAD+   ++
Sbjct: 1    MMDVD----PRQYENAAINDSDIHNIVLSYLVHNCFKETVESFISCTGMKQPADYQEDME 56

Query: 871  KRKPIFHFALEGNALKAIELTEQLAHNLLEENKDLHFDLLGLHFVELVCSRKCTEALEFA 692
            KRK IFHFALEGNALKAIELTEQLA +LLE+NKDLHFDLL LHFV+LVCSRKCTEALEFA
Sbjct: 57   KRKRIFHFALEGNALKAIELTEQLADDLLEKNKDLHFDLLSLHFVKLVCSRKCTEALEFA 116

Query: 691  QNKLTPFGKVHKYVEKLEDFMALLAYEEPEKSPMFHLLTQEYRQHVADSLNRAILAHANQ 512
            Q KLTPFGKV  YVEKLEDFM LLAYEEPEKSPMFHLL+ EYRQ VADSLNRA+LAHAN 
Sbjct: 117  QTKLTPFGKVQNYVEKLEDFMTLLAYEEPEKSPMFHLLSLEYRQQVADSLNRALLAHANL 176

Query: 511  PSYSAMERLIQQATLVRQCLHQDFGKD-GAPFCLKAFLKS 395
            PS SAMERLIQQ T+VRQCL+Q+  KD   PF LK FLKS
Sbjct: 177  PSCSAMERLIQQTTVVRQCLNQELSKDPPPPFSLKDFLKS 216


>ref|NP_001239946.1| uncharacterized protein LOC100801338 [Glycine max]
            gi|255636536|gb|ACU18606.1| unknown [Glycine max]
          Length = 214

 Score =  340 bits (873), Expect = 3e-91
 Identities = 169/218 (77%), Positives = 188/218 (86%)
 Frame = -1

Query: 1048 MDIDTDPPPRQFDQVAINDNDVRNIVLSYLVHNCFKETAESFIACTGMKQPADFPVGIDK 869
            MD+D    PRQ++ +A+NDND+ NIVLSYL+HNC+KE+ ESFIACTG KQP D+   +DK
Sbjct: 1    MDLD----PRQYENLAVNDNDIHNIVLSYLIHNCYKESVESFIACTGAKQPTDYLEDMDK 56

Query: 868  RKPIFHFALEGNALKAIELTEQLAHNLLEENKDLHFDLLGLHFVELVCSRKCTEALEFAQ 689
            RK IFHFALEGNALKAIELTEQLA ++LE NKDL FDLL LHFVELVCSRKCTEALEFAQ
Sbjct: 57   RKRIFHFALEGNALKAIELTEQLAKDILENNKDLQFDLLSLHFVELVCSRKCTEALEFAQ 116

Query: 688  NKLTPFGKVHKYVEKLEDFMALLAYEEPEKSPMFHLLTQEYRQHVADSLNRAILAHANQP 509
             KL PFGK  KY+EKLEDFMALLAY+EPEKSPMFHLL+ EYRQ VADSLNRAILAH N P
Sbjct: 117  TKLGPFGKEPKYMEKLEDFMALLAYKEPEKSPMFHLLSLEYRQQVADSLNRAILAHLNLP 176

Query: 508  SYSAMERLIQQATLVRQCLHQDFGKDGAPFCLKAFLKS 395
            SY+AMERLIQQAT+VRQCL Q+ GKDG PF LK FLKS
Sbjct: 177  SYTAMERLIQQATVVRQCLSQEAGKDGPPFSLKDFLKS 214


>emb|CBI19773.3| unnamed protein product [Vitis vinifera]
          Length = 215

 Score =  340 bits (873), Expect = 3e-91
 Identities = 172/219 (78%), Positives = 189/219 (86%), Gaps = 1/219 (0%)
 Frame = -1

Query: 1048 MDIDTDPPPRQFDQVAINDNDVRNIVLSYLVHNCFKETAESFIACTGMKQPADFPVGIDK 869
            MD+D    PRQ++  AIND+D+ NIVLSYLVHNCFKET ESFI+CTGMKQPAD+   ++K
Sbjct: 1    MDVD----PRQYENAAINDSDIHNIVLSYLVHNCFKETVESFISCTGMKQPADYQEDMEK 56

Query: 868  RKPIFHFALEGNALKAIELTEQLAHNLLEENKDLHFDLLGLHFVELVCSRKCTEALEFAQ 689
            RK IFHFALEGNALKAIELTEQLA +LLE+NKDLHFDLL LHFV+LVCSRKCTEALEFAQ
Sbjct: 57   RKRIFHFALEGNALKAIELTEQLADDLLEKNKDLHFDLLSLHFVKLVCSRKCTEALEFAQ 116

Query: 688  NKLTPFGKVHKYVEKLEDFMALLAYEEPEKSPMFHLLTQEYRQHVADSLNRAILAHANQP 509
             KLTPFGKV  YVEKLEDFM LLAYEEPEKSPMFHLL+ EYRQ VADSLNRA+LAHAN P
Sbjct: 117  TKLTPFGKVQNYVEKLEDFMTLLAYEEPEKSPMFHLLSLEYRQQVADSLNRALLAHANLP 176

Query: 508  SYSAMERLIQQATLVRQCLHQDFGKD-GAPFCLKAFLKS 395
            S SAMERLIQQ T+VRQCL+Q+  KD   PF LK FLKS
Sbjct: 177  SCSAMERLIQQTTVVRQCLNQELSKDPPPPFSLKDFLKS 215


>dbj|BAJ53170.1| JHL18I08.4 [Jatropha curcas]
          Length = 215

 Score =  339 bits (870), Expect = 6e-91
 Identities = 169/218 (77%), Positives = 189/218 (86%), Gaps = 1/218 (0%)
 Frame = -1

Query: 1048 MDIDTDPPPRQFDQVAINDNDVRNIVLSYLVHNCFKETAESFIACTGMKQPADFPVGIDK 869
            MD+D    PR ++QVAI DND+ N+VLSYLVHNC+KET ESFI+CTGMKQPAD    ++K
Sbjct: 1    MDVD----PRHYEQVAIKDNDIHNVVLSYLVHNCYKETVESFISCTGMKQPADCVQDMEK 56

Query: 868  RKPIFHFALEGNALKAIELTEQLAHNLLEENKDLHFDLLGLHFVELVCSRKCTEALEFAQ 689
            RK IF +ALEGN LKAIELTE+LAH+LLE NKDLHFDLL LHF+ELVC+RKCTEALEFAQ
Sbjct: 57   RKRIFRYALEGNVLKAIELTEELAHDLLEINKDLHFDLLSLHFIELVCTRKCTEALEFAQ 116

Query: 688  NKLTPFGKVHKYVEKLEDFMALLAYEEPEKSPMFHLLTQEYRQHVADSLNRAILAHANQP 509
             KLTPFGKV KYVEKLEDFMALLAYEEPEKSPMFHLL+ EYRQ V D+LNRAILAHAN+P
Sbjct: 117  TKLTPFGKVQKYVEKLEDFMALLAYEEPEKSPMFHLLSMEYRQQVVDNLNRAILAHANRP 176

Query: 508  SYSAMERLIQQATLVRQCLHQDFGKDG-APFCLKAFLK 398
            SY+AMERLIQQ T+VRQ L+QD GKDG  PF LK FLK
Sbjct: 177  SYTAMERLIQQMTVVRQSLNQDHGKDGLQPFSLKDFLK 214


>ref|XP_003527884.1| PREDICTED: UPF0559 protein v1g247787-like [Glycine max]
          Length = 215

 Score =  332 bits (850), Expect = 1e-88
 Identities = 167/219 (76%), Positives = 187/219 (85%), Gaps = 1/219 (0%)
 Frame = -1

Query: 1048 MDIDTDPPPRQFDQVAINDNDVRNIVLSYLVHNCFKETAESFIACTGMKQPADFPVGIDK 869
            MD+D    PRQ++ +A+NDND+ NIVLSYL+HNC+KE+ ESFIACTG  QPAD+   +DK
Sbjct: 1    MDLD----PRQYENLAVNDNDIHNIVLSYLIHNCYKESVESFIACTGATQPADYLEDMDK 56

Query: 868  RKPIFHFALEGNALKAIELTEQLAHNLLEENKDLHFDLLGLHFVELVCSRKCTEALEFAQ 689
            RK IFHFALEGNALKAIELTEQLA ++LE NKDL FDLL LHFVELVCSRKCTEALEFAQ
Sbjct: 57   RKRIFHFALEGNALKAIELTEQLAKDILENNKDLQFDLLSLHFVELVCSRKCTEALEFAQ 116

Query: 688  NKLTPFGKVHKYVEKLEDFMALLAYEEPEKSPMFHLLTQEYRQHVADSLNRAILAHANQP 509
             KL PFGK  KY+EKLEDFMALLAY+EPEKSPMFHLL+ EYRQ VADSLNRAILAH N P
Sbjct: 117  TKLGPFGKEPKYMEKLEDFMALLAYKEPEKSPMFHLLSLEYRQQVADSLNRAILAHLNLP 176

Query: 508  SYSAMERLIQQATLVRQCLHQDFGKDG-APFCLKAFLKS 395
            SY+AMERLIQQAT+VRQCL Q+ GKD   PF LK FL+S
Sbjct: 177  SYTAMERLIQQATVVRQCLSQEAGKDAPPPFSLKDFLRS 215


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