BLASTX nr result

ID: Coptis25_contig00003432 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003432
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278553.1| PREDICTED: uncharacterized protein LOC100253...    57   1e-10
ref|XP_002520815.1| conserved hypothetical protein [Ricinus comm...    55   3e-09
gb|ABK26779.1| unknown [Picea sitchensis]                              49   3e-09
ref|XP_002265642.1| PREDICTED: uncharacterized protein LOC100243...    57   5e-09
ref|XP_002265673.1| PREDICTED: uncharacterized protein LOC100243...    57   5e-09

>ref|XP_002278553.1| PREDICTED: uncharacterized protein LOC100253518 isoform 1 [Vitis
           vinifera] gi|359486360|ref|XP_003633434.1| PREDICTED:
           uncharacterized protein LOC100253518 isoform 2 [Vitis
           vinifera]
          Length = 156

 Score = 56.6 bits (135), Expect(2) = 1e-10
 Identities = 25/35 (71%), Positives = 31/35 (88%)
 Frame = -2

Query: 106 FQDTLEEAKDGDSSMQILVGQMYYNCYGVSRDTSK 2
           FQDTL+EAK GD++MQ+LVGQMY++ YGVSRD  K
Sbjct: 82  FQDTLKEAKAGDTTMQVLVGQMYFSGYGVSRDAQK 116



 Score = 34.3 bits (77), Expect(2) = 1e-10
 Identities = 16/32 (50%), Positives = 22/32 (68%)
 Frame = -1

Query: 203 SKPSNLNMEYTDEQSRVSLSDVVSDYARRWFQ 108
           S+   L ME ++ Q R+ L+ VVSD A+RWFQ
Sbjct: 52  SERVRLKMESSEGQRRMPLAQVVSDCAKRWFQ 83


>ref|XP_002520815.1| conserved hypothetical protein [Ricinus communis]
           gi|223539946|gb|EEF41524.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 159

 Score = 55.5 bits (132), Expect(2) = 3e-09
 Identities = 24/35 (68%), Positives = 30/35 (85%)
 Frame = -2

Query: 106 FQDTLEEAKDGDSSMQILVGQMYYNCYGVSRDTSK 2
           FQDTL+EAK GD SMQ+LVGQMY+N YG+ +D+ K
Sbjct: 82  FQDTLKEAKAGDISMQVLVGQMYFNGYGIPKDSQK 116



 Score = 30.8 bits (68), Expect(2) = 3e-09
 Identities = 13/21 (61%), Positives = 17/21 (80%)
 Frame = -1

Query: 170 DEQSRVSLSDVVSDYARRWFQ 108
           D ++R+ LS+VVSD  RRWFQ
Sbjct: 63  DGKNRLPLSNVVSDCVRRWFQ 83


>gb|ABK26779.1| unknown [Picea sitchensis]
          Length = 144

 Score = 49.3 bits (116), Expect(2) = 3e-09
 Identities = 22/35 (62%), Positives = 28/35 (80%)
 Frame = -2

Query: 106 FQDTLEEAKDGDSSMQILVGQMYYNCYGVSRDTSK 2
           FQD+L+EAK GD+ MQ+LVGQMY + YGV RD  +
Sbjct: 70  FQDSLKEAKAGDTGMQVLVGQMYCSGYGVHRDIQR 104



 Score = 37.0 bits (84), Expect(2) = 3e-09
 Identities = 15/28 (53%), Positives = 22/28 (78%)
 Frame = -1

Query: 191 NLNMEYTDEQSRVSLSDVVSDYARRWFQ 108
           N+ M+  +EQ+R+ L +VV+D ARRWFQ
Sbjct: 44  NMKMQSGEEQNRLPLKEVVADCARRWFQ 71


>ref|XP_002265642.1| PREDICTED: uncharacterized protein LOC100243041 isoform 1 [Vitis
           vinifera] gi|359481191|ref|XP_003632590.1| PREDICTED:
           uncharacterized protein LOC100243041 [Vitis vinifera]
          Length = 100

 Score = 56.6 bits (135), Expect(2) = 5e-09
 Identities = 26/35 (74%), Positives = 28/35 (80%)
 Frame = -2

Query: 106 FQDTLEEAKDGDSSMQILVGQMYYNCYGVSRDTSK 2
           FQDTL EAK GD SMQ+LVGQMYY+ YGV RD  K
Sbjct: 27  FQDTLREAKSGDVSMQVLVGQMYYSGYGVPRDAQK 61



 Score = 28.9 bits (63), Expect(2) = 5e-09
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = -1

Query: 158 RVSLSDVVSDYARRWFQ 108
           RV LS+VVSD  +RWFQ
Sbjct: 12  RVPLSEVVSDCVKRWFQ 28


>ref|XP_002265673.1| PREDICTED: uncharacterized protein LOC100243041 isoform 2 [Vitis
           vinifera]
          Length = 99

 Score = 56.6 bits (135), Expect(2) = 5e-09
 Identities = 26/35 (74%), Positives = 28/35 (80%)
 Frame = -2

Query: 106 FQDTLEEAKDGDSSMQILVGQMYYNCYGVSRDTSK 2
           FQDTL EAK GD SMQ+LVGQMYY+ YGV RD  K
Sbjct: 27  FQDTLREAKSGDVSMQVLVGQMYYSGYGVPRDAQK 61



 Score = 28.9 bits (63), Expect(2) = 5e-09
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = -1

Query: 158 RVSLSDVVSDYARRWFQ 108
           RV LS+VVSD  +RWFQ
Sbjct: 12  RVPLSEVVSDCVKRWFQ 28


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