BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003427
         (1542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276286.2| PREDICTED: katanin p60 ATPase-containing sub...   603   e-170
ref|XP_002519683.1| Katanin p60 ATPase-containing subunit, putat...   595   e-168
ref|XP_003531097.1| PREDICTED: katanin p60 ATPase-containing sub...   592   e-167
ref|XP_003524802.1| PREDICTED: katanin p60 ATPase-containing sub...   589   e-166
ref|XP_002305703.1| predicted protein [Populus trichocarpa] gi|2...   589   e-166

>ref|XP_002276286.2| PREDICTED: katanin p60 ATPase-containing subunit A-like 2 [Vitis
            vinifera]
          Length = 406

 Score =  603 bits (1555), Expect = e-170
 Identities = 312/404 (77%), Positives = 336/404 (83%), Gaps = 24/404 (5%)
 Frame = -2

Query: 1424 DEPMPTRWSFQDFKMFYDAKFGRKKEAEQKE----------NVLVSNVHTNGTNVVN--- 1284
            DEP  TRWSFQDFKMFYD KFGRKKE E+ +          N   SN   NG   V    
Sbjct: 3    DEPFLTRWSFQDFKMFYDVKFGRKKEPEKHDAAESSGKPVSNGNSSNGTANGGGHVKNTS 62

Query: 1283 -----EEFRNQ------ANGISSETTNGKPQKSLLPPFDSAETRALGESLCRDIIRGNPD 1137
                 E++R Q       NG+ S+  + KPQKSLLP F+SA+ RALGESL RDIIRG+PD
Sbjct: 63   DLAIYEQYRTQERGSANGNGVLSDRYDEKPQKSLLPSFESADMRALGESLSRDIIRGSPD 122

Query: 1136 VKWENIKGLETAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATE 957
            VKW++IKGLE AKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATE
Sbjct: 123  VKWDSIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATE 182

Query: 956  CNTTFFNISASSIVSKWRGDSEKLVKVLFELARHHAPSTIFLDEIDAIISQRGEGRSEHE 777
            C TTFFNISASS+VSKWRGDSEKLVKVLFELARHHAPSTIFLDEIDA+ISQRGEGRSEHE
Sbjct: 183  CKTTFFNISASSVVSKWRGDSEKLVKVLFELARHHAPSTIFLDEIDALISQRGEGRSEHE 242

Query: 776  ASRRLKTELLVQMDGLTKTNDLVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRAM 597
            ASRRLKTELLVQMDGLTKT++LVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRAM
Sbjct: 243  ASRRLKTELLVQMDGLTKTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRAM 302

Query: 596  FEELLPSIPGEEKLPYELLVERTEGYSGSDIRLVCKEAAMQPLRRVMXXXXXXXXXXXXX 417
            FEELLPS+PGEEKLPY+L+VERTEGYSGSDIRL+CKEAAMQPLRR+M             
Sbjct: 303  FEELLPSVPGEEKLPYDLMVERTEGYSGSDIRLLCKEAAMQPLRRLMAHLEDKAEVVPEE 362

Query: 416  XXPKVGPIKHEDIETALRNTRPSAHLHAHRYDKFNADYGSHIVQ 285
              PKVGPIKH+DIETAL+NTRPSAHLH HRYDKFN DYGS I+Q
Sbjct: 363  ELPKVGPIKHDDIETALKNTRPSAHLHVHRYDKFNTDYGSQILQ 406


>ref|XP_002519683.1| Katanin p60 ATPase-containing subunit, putative [Ricinus communis]
            gi|223541100|gb|EEF42656.1| Katanin p60 ATPase-containing
            subunit, putative [Ricinus communis]
          Length = 408

 Score =  595 bits (1535), Expect = e-168
 Identities = 306/406 (75%), Positives = 333/406 (82%), Gaps = 26/406 (6%)
 Frame = -2

Query: 1424 DEPMPTRWSFQDFKMFYDAKFGRKKEAEQKENVL------------VSNVHTNGTNVVN- 1284
            DEP  TRWSFQDFK+FYDAKFGRKK +E +  V              SN  +NG   V  
Sbjct: 3    DEPSVTRWSFQDFKLFYDAKFGRKKMSETQNGVAGPAVANGIGNSSTSNATSNGNGHVKN 62

Query: 1283 -------EEFRNQ------ANGISSETTNGKPQKSLLPPFDSAETRALGESLCRDIIRGN 1143
                   E++RNQ      +NG+     + +PQKSLLP FDSAETRAL E LCRDI+RGN
Sbjct: 63   TSDMAIYEQYRNQDRSSNHSNGVLPNGIDDRPQKSLLPAFDSAETRALAEGLCRDIVRGN 122

Query: 1142 PDVKWENIKGLETAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVA 963
            PDVKWE+IKGLE AKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVA
Sbjct: 123  PDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVA 182

Query: 962  TECNTTFFNISASSIVSKWRGDSEKLVKVLFELARHHAPSTIFLDEIDAIISQRGEGRSE 783
            TEC TTFFNISASS+VSKWRGDSEKL+KVLFELARHHAPSTIF+DEIDAIISQRGEGRSE
Sbjct: 183  TECKTTFFNISASSVVSKWRGDSEKLIKVLFELARHHAPSTIFIDEIDAIISQRGEGRSE 242

Query: 782  HEASRRLKTELLVQMDGLTKTNDLVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARR 603
            HEASRRLKTELL+QMDGLT+T +LVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARR
Sbjct: 243  HEASRRLKTELLIQMDGLTRTEELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARR 302

Query: 602  AMFEELLPSIPGEEKLPYELLVERTEGYSGSDIRLVCKEAAMQPLRRVMXXXXXXXXXXX 423
            AM+EELLP  P E+KLPY+LLVERTEG+SGSDIRL+CKEAAMQPLRR+M           
Sbjct: 303  AMYEELLPPQPDEDKLPYDLLVERTEGFSGSDIRLLCKEAAMQPLRRLMALLEDRQEVVP 362

Query: 422  XXXXPKVGPIKHEDIETALRNTRPSAHLHAHRYDKFNADYGSHIVQ 285
                PKVGPI  EDIETAL+NTRPSAHLHAHRY+KFNADYGS I+Q
Sbjct: 363  DDELPKVGPITPEDIETALKNTRPSAHLHAHRYEKFNADYGSQILQ 408


>ref|XP_003531097.1| PREDICTED: katanin p60 ATPase-containing subunit A-like 2-like
            [Glycine max]
          Length = 405

 Score =  592 bits (1527), Expect = e-167
 Identities = 306/403 (75%), Positives = 333/403 (82%), Gaps = 23/403 (5%)
 Frame = -2

Query: 1424 DEPMPTRWSFQDFKMFYDAKFGRKKEAEQKENVL---VSNVHTNGTNV------------ 1290
            D+PMPTRWSFQDFK+ YDAKFGRKK AE  ++     VSN + N   V            
Sbjct: 3    DDPMPTRWSFQDFKLCYDAKFGRKKVAENGDDAAGKAVSNGNGNSVTVAIVSNGNKRASE 62

Query: 1289 --VNEEFRNQA------NGISSETTNGKPQKSLLPPFDSAETRALGESLCRDIIRGNPDV 1134
              V E+FR++       NG     T+ +PQKSLLPPF+SAE RAL ESL RDIIRG+PDV
Sbjct: 63   MAVYEQFRSEGQNQIHTNGFVPTLTDERPQKSLLPPFESAEMRALAESLSRDIIRGSPDV 122

Query: 1133 KWENIKGLETAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATEC 954
            KWE+IKGLE AKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATEC
Sbjct: 123  KWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATEC 182

Query: 953  NTTFFNISASSIVSKWRGDSEKLVKVLFELARHHAPSTIFLDEIDAIISQRGEGRSEHEA 774
            NTTFFNISASS+VSKWRGDSEKLVKVLFELARHHAPSTIFLDEIDAIISQRGE RSEHEA
Sbjct: 183  NTTFFNISASSVVSKWRGDSEKLVKVLFELARHHAPSTIFLDEIDAIISQRGEARSEHEA 242

Query: 773  SRRLKTELLVQMDGLTKTNDLVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRAMF 594
            SRRLKTELL+QMDGLTKT++LVFVLAATNLPWELDAAMLRRLEKRILVPLPEP ARRAMF
Sbjct: 243  SRRLKTELLIQMDGLTKTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPVARRAMF 302

Query: 593  EELLPSIPGEEKLPYELLVERTEGYSGSDIRLVCKEAAMQPLRRVMXXXXXXXXXXXXXX 414
            EELLP  PGEE +PY++L ++TEGYSGSDIRL+CKE AMQPLRR+M              
Sbjct: 303  EELLPQQPGEESIPYDILEDKTEGYSGSDIRLLCKETAMQPLRRLMSQLEQNQDVVPEEE 362

Query: 413  XPKVGPIKHEDIETALRNTRPSAHLHAHRYDKFNADYGSHIVQ 285
             PKVGPI+ EDIETALRNTRPSAHLHAH+YDKFNADYGS I+Q
Sbjct: 363  LPKVGPIRSEDIETALRNTRPSAHLHAHKYDKFNADYGSQILQ 405


>ref|XP_003524802.1| PREDICTED: katanin p60 ATPase-containing subunit A-like 2-like
            [Glycine max]
          Length = 403

 Score =  589 bits (1519), Expect = e-166
 Identities = 303/401 (75%), Positives = 330/401 (82%), Gaps = 21/401 (5%)
 Frame = -2

Query: 1424 DEPMPTRWSFQDFKMFYDAKFGRKKEAEQKE----------NVLVSNVHTNGTN-----V 1290
            D+PMPTRWSFQDFK++YDAKFGRKK AE  +          N +   + +NG        
Sbjct: 3    DDPMPTRWSFQDFKLYYDAKFGRKKVAENGDTATDKAVSNGNSVTVTIVSNGNKRASEMA 62

Query: 1289 VNEEFRNQA------NGISSETTNGKPQKSLLPPFDSAETRALGESLCRDIIRGNPDVKW 1128
            V E+FR +       NG      + +PQKSLLPPF+SAE RAL ESL RDIIRG+PDVKW
Sbjct: 63   VYEQFRGEGLNQIHTNGFVPTIVDERPQKSLLPPFESAEMRALAESLSRDIIRGSPDVKW 122

Query: 1127 ENIKGLETAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECNT 948
            E+IKGLE AKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATEC T
Sbjct: 123  ESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECKT 182

Query: 947  TFFNISASSIVSKWRGDSEKLVKVLFELARHHAPSTIFLDEIDAIISQRGEGRSEHEASR 768
            TFFNISASS+VSKWRGDSEKLVKVLFELARHHAPSTIFLDEIDAIISQRGE RSEHEASR
Sbjct: 183  TFFNISASSVVSKWRGDSEKLVKVLFELARHHAPSTIFLDEIDAIISQRGEARSEHEASR 242

Query: 767  RLKTELLVQMDGLTKTNDLVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRAMFEE 588
            RLKTELL+QMDGLTKT++LVFVLAATNLPWELDAAMLRRLEKRILVPLPEP ARRAMFEE
Sbjct: 243  RLKTELLIQMDGLTKTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPVARRAMFEE 302

Query: 587  LLPSIPGEEKLPYELLVERTEGYSGSDIRLVCKEAAMQPLRRVMXXXXXXXXXXXXXXXP 408
            LLP  P EE +PY++LV++TEGYSGSDIRL+CKE AMQPLRR+M               P
Sbjct: 303  LLPQQPDEEPIPYDILVDKTEGYSGSDIRLLCKETAMQPLRRLMSQLEQSQDVVPEEELP 362

Query: 407  KVGPIKHEDIETALRNTRPSAHLHAHRYDKFNADYGSHIVQ 285
            KVGPIK EDIETALRNTRPSAHLHAH+YDKFNADYGS I+Q
Sbjct: 363  KVGPIKSEDIETALRNTRPSAHLHAHKYDKFNADYGSQILQ 403


>ref|XP_002305703.1| predicted protein [Populus trichocarpa] gi|222848667|gb|EEE86214.1|
            predicted protein [Populus trichocarpa]
          Length = 384

 Score =  589 bits (1519), Expect = e-166
 Identities = 304/382 (79%), Positives = 322/382 (84%), Gaps = 2/382 (0%)
 Frame = -2

Query: 1424 DEPMPTRWSFQDFKMFYDAKFGRKKEAEQK--ENVLVSNVHTNGTNVVNEEFRNQANGIS 1251
            DEP  TRWSFQDFK FYD KFGRKK A     E    S+   NG   V     N     S
Sbjct: 3    DEPSVTRWSFQDFKTFYDGKFGRKKAAAAAAAEAEAASDSQQNGQTTVVASNGNGHVNNS 62

Query: 1250 SETTNGKPQKSLLPPFDSAETRALGESLCRDIIRGNPDVKWENIKGLETAKRLLKEAVVM 1071
            S+    + +KSLLP FDSAETRAL ESLCRDIIRG+PDVKWE+IKGLE AKRLLKEAVVM
Sbjct: 63   SDMAIYEQKKSLLPAFDSAETRALAESLCRDIIRGSPDVKWESIKGLENAKRLLKEAVVM 122

Query: 1070 PIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECNTTFFNISASSIVSKWRGDSE 891
            PIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATEC TTFFNISASS+VSKWRGDSE
Sbjct: 123  PIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSE 182

Query: 890  KLVKVLFELARHHAPSTIFLDEIDAIISQRGEGRSEHEASRRLKTELLVQMDGLTKTNDL 711
            KL+KVLFELARHHAPSTIFLDEIDAIISQRGE RSEHEASRRLKTELL+QMDGLT+TN+L
Sbjct: 183  KLIKVLFELARHHAPSTIFLDEIDAIISQRGEARSEHEASRRLKTELLIQMDGLTRTNEL 242

Query: 710  VFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRAMFEELLPSIPGEEKLPYELLVER 531
            VFVLAATNLPWELDAAMLRRLEKRILVPLPEPEAR AMFEELLPS P EEKLPY+LLVER
Sbjct: 243  VFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARAAMFEELLPSQPDEEKLPYDLLVER 302

Query: 530  TEGYSGSDIRLVCKEAAMQPLRRVMXXXXXXXXXXXXXXXPKVGPIKHEDIETALRNTRP 351
            TEG+SGSDIRL+CKEAAMQPLRR+M               PKVGPI+ EDIETAL+NTRP
Sbjct: 303  TEGFSGSDIRLLCKEAAMQPLRRIMTLLEDTEEVVPEDELPKVGPIRPEDIETALKNTRP 362

Query: 350  SAHLHAHRYDKFNADYGSHIVQ 285
            SAHLHAHRYDKFNADYGS I+Q
Sbjct: 363  SAHLHAHRYDKFNADYGSQILQ 384