BLASTX nr result

ID: Coptis25_contig00003402 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003402
         (1397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263263.1| PREDICTED: glyceraldehyde-3-phosphate dehydr...   640   0.0  
ref|XP_002312235.1| predicted protein [Populus trichocarpa] gi|2...   629   e-178
gb|ABK95756.1| unknown [Populus trichocarpa]                          625   e-177
ref|XP_002315071.1| predicted protein [Populus trichocarpa] gi|2...   622   e-176
ref|XP_004139839.1| PREDICTED: glyceraldehyde-3-phosphate dehydr...   621   e-175

>ref|XP_002263263.1| PREDICTED: glyceraldehyde-3-phosphate dehydrogenase, cytosolic [Vitis
            vinifera] gi|297736130|emb|CBI24168.3| unnamed protein
            product [Vitis vinifera]
          Length = 429

 Score =  640 bits (1650), Expect = 0.0
 Identities = 316/370 (85%), Positives = 339/370 (91%)
 Frame = +1

Query: 1    DSLSLQKYSGRSIQPIKATATETPPTIPKSWSGGKTKIGINGFGRIGRLVLRIATSRDDI 180
            +S SLQK S RS+QPIKATATE PPT+ KSWS G+TKIGINGFGRIGRLVLR+ATSRDDI
Sbjct: 59   NSSSLQKCSARSLQPIKATATELPPTVQKSWSSGQTKIGINGFGRIGRLVLRVATSRDDI 118

Query: 181  DVVAVNDPFIDASYMAYMFKYDSTHGVFKGTINVIDASTLEINGKKVVVTSKRDPAEIPW 360
            DVVAVNDPF+DA YMAYMFKYDSTHGVFKGTI V+D STLEINGK++ VTSKRDP+EIPW
Sbjct: 119  DVVAVNDPFVDAKYMAYMFKYDSTHGVFKGTIKVLDESTLEINGKQIKVTSKRDPSEIPW 178

Query: 361  GELGADYVVESSGVFTTLEKGSLHIKGGAKKVIISAPSADAPMFVVGVNERTYKPSMNVV 540
            G+ G DYVVESSGVFTT EK S HIKGGAKKV+ISAPSADAPMFVVGVNE +YKPSMN+V
Sbjct: 179  GDYGIDYVVESSGVFTTTEKASAHIKGGAKKVVISAPSADAPMFVVGVNETSYKPSMNIV 238

Query: 541  SNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXXXXXXXXDGPSMKDWRGGRGAAQNII 720
            SNASCTTNCLAPLAKVVHEEFGI+EGLM             DGPSMKDWRGGRGA+QNII
Sbjct: 239  SNASCTTNCLAPLAKVVHEEFGIVEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNII 298

Query: 721  PSSTGAAKAVGKVLPELNGKLTGMAFRVPTSNVSVVDLTCRLEKSASYEDVKAAIKYASE 900
            PSSTGAAKAVGKVLPELNGKLTGMAFRVPT NVSVVDLTCRL+KSA+YEDVKAA+KYASE
Sbjct: 299  PSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTCRLKKSATYEDVKAAVKYASE 358

Query: 901  GPLKGILGYTDEDVVSNDFVGDARSSIFDAKAGIGLSSSFMKLVSWYDNEWGYSNRVLDL 1080
            GPLKGILGYTDEDVVSNDFVGD+RSSIFDAKAGIGLS+SFMKLV+WYDNEWGYSNRVLDL
Sbjct: 359  GPLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIGLSASFMKLVAWYDNEWGYSNRVLDL 418

Query: 1081 IEHMALVAVN 1110
            IEHMALVA +
Sbjct: 419  IEHMALVAAS 428


>ref|XP_002312235.1| predicted protein [Populus trichocarpa] gi|222852055|gb|EEE89602.1|
            predicted protein [Populus trichocarpa]
          Length = 422

 Score =  629 bits (1622), Expect = e-178
 Identities = 315/370 (85%), Positives = 336/370 (90%)
 Frame = +1

Query: 4    SLSLQKYSGRSIQPIKATATETPPTIPKSWSGGKTKIGINGFGRIGRLVLRIATSRDDID 183
            S SL   SGRSIQPIKATATE PPT+ +S + GKTKIGINGFGRIGRLVLR+AT RDDID
Sbjct: 53   SSSLHTCSGRSIQPIKATATEMPPTVLRSRADGKTKIGINGFGRIGRLVLRVATFRDDID 112

Query: 184  VVAVNDPFIDASYMAYMFKYDSTHGVFKGTINVIDASTLEINGKKVVVTSKRDPAEIPWG 363
            VVAVNDPFIDA YMAYMF+YDSTHGVF GTI V+D STLEINGK++ +TSKRDPAEIPWG
Sbjct: 113  VVAVNDPFIDAEYMAYMFRYDSTHGVFNGTIKVLDDSTLEINGKQIKITSKRDPAEIPWG 172

Query: 364  ELGADYVVESSGVFTTLEKGSLHIKGGAKKVIISAPSADAPMFVVGVNERTYKPSMNVVS 543
            + GA++VVESSGVFTTLEK + H KGGAKKV+ISAPSADAPMFVVGVNE+TYKP+M+VVS
Sbjct: 173  DFGAEFVVESSGVFTTLEKAAAHKKGGAKKVVISAPSADAPMFVVGVNEKTYKPNMDVVS 232

Query: 544  NASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXXXXXXXXDGPSMKDWRGGRGAAQNIIP 723
            NASCTTNCLAPLAKVVHEEFGILEGLM             DGPSMKDWRGGRGAAQNIIP
Sbjct: 233  NASCTTNCLAPLAKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGAAQNIIP 292

Query: 724  SSTGAAKAVGKVLPELNGKLTGMAFRVPTSNVSVVDLTCRLEKSASYEDVKAAIKYASEG 903
            SSTGAAKAVGKVLPELNGKLTGMAFRVPT NVSVVDLTCRLEKSASYEDVKAAIKYASEG
Sbjct: 293  SSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTCRLEKSASYEDVKAAIKYASEG 352

Query: 904  PLKGILGYTDEDVVSNDFVGDARSSIFDAKAGIGLSSSFMKLVSWYDNEWGYSNRVLDLI 1083
            PL GILGYTD+DVVSNDFVGD+RSSIFDAKAGIGLS+SFMKLVSWYDNEWGYSNRVLDLI
Sbjct: 353  PLMGILGYTDDDVVSNDFVGDSRSSIFDAKAGIGLSASFMKLVSWYDNEWGYSNRVLDLI 412

Query: 1084 EHMALVAVNN 1113
            EHMALVA +N
Sbjct: 413  EHMALVAAHN 422


>gb|ABK95756.1| unknown [Populus trichocarpa]
          Length = 422

 Score =  625 bits (1612), Expect = e-177
 Identities = 310/370 (83%), Positives = 336/370 (90%)
 Frame = +1

Query: 4    SLSLQKYSGRSIQPIKATATETPPTIPKSWSGGKTKIGINGFGRIGRLVLRIATSRDDID 183
            S S Q  SGRSIQPIKATATE PPT+ KS + GKTKIGINGFGRIGRLVLR+AT RDDID
Sbjct: 53   SSSSQTCSGRSIQPIKATATEMPPTVLKSRADGKTKIGINGFGRIGRLVLRVATFRDDID 112

Query: 184  VVAVNDPFIDASYMAYMFKYDSTHGVFKGTINVIDASTLEINGKKVVVTSKRDPAEIPWG 363
            VVAVNDPFIDA+YMAYMFKYDSTHGVF GTI V+D S LEINGK++ +TSKRDP EIPWG
Sbjct: 113  VVAVNDPFIDANYMAYMFKYDSTHGVFSGTIKVLDDSNLEINGKQIKITSKRDPTEIPWG 172

Query: 364  ELGADYVVESSGVFTTLEKGSLHIKGGAKKVIISAPSADAPMFVVGVNERTYKPSMNVVS 543
            + GA+YVVESSG+FTT+EK + H+KGGAKKV+ISAPSADAPMFVVGVNE+TYKP+M++VS
Sbjct: 173  DFGAEYVVESSGIFTTVEKAAAHMKGGAKKVVISAPSADAPMFVVGVNEKTYKPNMDIVS 232

Query: 544  NASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXXXXXXXXDGPSMKDWRGGRGAAQNIIP 723
            NASCTTNCLAPLAKVVHEEFGI+EGLM             DGPS KDWRGGRGAAQNIIP
Sbjct: 233  NASCTTNCLAPLAKVVHEEFGIIEGLMTTVHATTATQKTVDGPSRKDWRGGRGAAQNIIP 292

Query: 724  SSTGAAKAVGKVLPELNGKLTGMAFRVPTSNVSVVDLTCRLEKSASYEDVKAAIKYASEG 903
            SSTGAAKAVGKVLPELNGKLTGMAFRVPT NVSVVDLTCRLEKSASYEDVKAAIKYASEG
Sbjct: 293  SSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTCRLEKSASYEDVKAAIKYASEG 352

Query: 904  PLKGILGYTDEDVVSNDFVGDARSSIFDAKAGIGLSSSFMKLVSWYDNEWGYSNRVLDLI 1083
            PLKGILGYTD+DVVS+DF+GD+RSSIFDAKAGIGLS+SFMKLVSWYDNEWGYSNRVLDLI
Sbjct: 353  PLKGILGYTDDDVVSSDFLGDSRSSIFDAKAGIGLSASFMKLVSWYDNEWGYSNRVLDLI 412

Query: 1084 EHMALVAVNN 1113
            EHMALVA +N
Sbjct: 413  EHMALVAAHN 422


>ref|XP_002315071.1| predicted protein [Populus trichocarpa] gi|222864111|gb|EEF01242.1|
            predicted protein [Populus trichocarpa]
          Length = 422

 Score =  622 bits (1603), Expect = e-176
 Identities = 309/370 (83%), Positives = 335/370 (90%)
 Frame = +1

Query: 4    SLSLQKYSGRSIQPIKATATETPPTIPKSWSGGKTKIGINGFGRIGRLVLRIATSRDDID 183
            S S Q  SGRSIQPIKATATE PPT+ KS + GKTKIGINGFGRIGRLVLR+AT RDDID
Sbjct: 53   SSSSQTCSGRSIQPIKATATEMPPTVLKSRADGKTKIGINGFGRIGRLVLRVATFRDDID 112

Query: 184  VVAVNDPFIDASYMAYMFKYDSTHGVFKGTINVIDASTLEINGKKVVVTSKRDPAEIPWG 363
            VVAVNDPFIDA+YMAYMFKYDSTHGVF GTI V+D S LEINGK++ +TSKRDP EIPWG
Sbjct: 113  VVAVNDPFIDANYMAYMFKYDSTHGVFSGTIKVLDDSNLEINGKQIKITSKRDPTEIPWG 172

Query: 364  ELGADYVVESSGVFTTLEKGSLHIKGGAKKVIISAPSADAPMFVVGVNERTYKPSMNVVS 543
            + GA+YVVESSG+FTT+EK + H+K GAKKV+ISAPSADAPMFVVGVNE+TYKP+M++VS
Sbjct: 173  DFGAEYVVESSGIFTTVEKAAAHMKVGAKKVVISAPSADAPMFVVGVNEKTYKPNMDIVS 232

Query: 544  NASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXXXXXXXXDGPSMKDWRGGRGAAQNIIP 723
            NASCTTNCLAPLAKVVHEEFGI+EGLM             DGPS KDWRGGRGAAQNIIP
Sbjct: 233  NASCTTNCLAPLAKVVHEEFGIIEGLMTTVHATTATQKTVDGPSRKDWRGGRGAAQNIIP 292

Query: 724  SSTGAAKAVGKVLPELNGKLTGMAFRVPTSNVSVVDLTCRLEKSASYEDVKAAIKYASEG 903
            SSTGAAKAVGKVLPELNGKLTGMAFRVPT NVSVVDLTCRLEKSASYEDVKAAIKYASEG
Sbjct: 293  SSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTCRLEKSASYEDVKAAIKYASEG 352

Query: 904  PLKGILGYTDEDVVSNDFVGDARSSIFDAKAGIGLSSSFMKLVSWYDNEWGYSNRVLDLI 1083
            PLKGILGYTD+DVVS+DF+GD+RSSIFDAKAGIGLS+SFMKLVSWYDNEWGYSNRVLDLI
Sbjct: 353  PLKGILGYTDDDVVSSDFLGDSRSSIFDAKAGIGLSASFMKLVSWYDNEWGYSNRVLDLI 412

Query: 1084 EHMALVAVNN 1113
            EHMALVA +N
Sbjct: 413  EHMALVAAHN 422


>ref|XP_004139839.1| PREDICTED: glyceraldehyde-3-phosphate dehydrogenase, cytosolic-like
            [Cucumis sativus] gi|449492996|ref|XP_004159163.1|
            PREDICTED: glyceraldehyde-3-phosphate dehydrogenase,
            cytosolic-like [Cucumis sativus]
          Length = 422

 Score =  621 bits (1602), Expect = e-175
 Identities = 312/369 (84%), Positives = 328/369 (88%)
 Frame = +1

Query: 4    SLSLQKYSGRSIQPIKATATETPPTIPKSWSGGKTKIGINGFGRIGRLVLRIATSRDDID 183
            S SLQ     +IQPIKATATE PPT+ KS SGGKTK+GINGFGRIGRLVLRIATSRDDID
Sbjct: 53   SSSLQLRRSHNIQPIKATATELPPTVQKSRSGGKTKVGINGFGRIGRLVLRIATSRDDID 112

Query: 184  VVAVNDPFIDASYMAYMFKYDSTHGVFKGTINVIDASTLEINGKKVVVTSKRDPAEIPWG 363
            VVAVNDPF+DA YMAYMFK+DSTHG FKGTINV+D STLEINGK+V V SKRDP EIPWG
Sbjct: 113  VVAVNDPFVDAKYMAYMFKFDSTHGNFKGTINVVDDSTLEINGKQVKVLSKRDPEEIPWG 172

Query: 364  ELGADYVVESSGVFTTLEKGSLHIKGGAKKVIISAPSADAPMFVVGVNERTYKPSMNVVS 543
            E GA++VVESSGVFTT    S H+KGGA+KV+ISAPSADAPMFVVGVNE TYKPSM++VS
Sbjct: 173  EFGAEFVVESSGVFTTKNMASAHLKGGARKVVISAPSADAPMFVVGVNETTYKPSMDIVS 232

Query: 544  NASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXXXXXXXXDGPSMKDWRGGRGAAQNIIP 723
            NASCTTNCLAPLAKVVHE FGI EGLM             DGPSMKDWRGGRGAAQNIIP
Sbjct: 233  NASCTTNCLAPLAKVVHEVFGIAEGLMTTVHATTATQKTVDGPSMKDWRGGRGAAQNIIP 292

Query: 724  SSTGAAKAVGKVLPELNGKLTGMAFRVPTSNVSVVDLTCRLEKSASYEDVKAAIKYASEG 903
            SSTGAAKAVGKVLPELNGKLTGMAFRVPT NVSVVDLTCRLEKSASYEDVKA IKYASEG
Sbjct: 293  SSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTCRLEKSASYEDVKATIKYASEG 352

Query: 904  PLKGILGYTDEDVVSNDFVGDARSSIFDAKAGIGLSSSFMKLVSWYDNEWGYSNRVLDLI 1083
            PLKGILGYTDEDVVSNDFVGD+RSSIFDAKAGIGLS SFMKL+SWYDNEWGYSNRVLDLI
Sbjct: 353  PLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIGLSDSFMKLISWYDNEWGYSNRVLDLI 412

Query: 1084 EHMALVAVN 1110
            EHMALVA N
Sbjct: 413  EHMALVAAN 421


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