BLASTX nr result
ID: Coptis25_contig00003400
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00003400 (274 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003631131.1| hypothetical protein MTR_8g107440 [Medicago ... 119 4e-27 ref|XP_003530965.1| PREDICTED: uncharacterized protein LOC100788... 117 7e-27 ref|XP_003524340.1| PREDICTED: uncharacterized protein LOC100800... 117 7e-27 ref|XP_002278916.2| PREDICTED: uncharacterized protein LOC100250... 114 3e-26 emb|CBI15593.3| unnamed protein product [Vitis vinifera] 114 3e-26 >ref|XP_003631131.1| hypothetical protein MTR_8g107440 [Medicago truncatula] gi|355525153|gb|AET05607.1| hypothetical protein MTR_8g107440 [Medicago truncatula] Length = 1238 Score = 119 bits (297), Expect(2) = 4e-27 Identities = 58/69 (84%), Positives = 60/69 (86%) Frame = +3 Query: 3 RLKVLELRGCDLSTSPAKGLLQLRHTLEKLILHNSTDALRHVFASRIVDIKDSAVWNRLF 182 RLKVLELRGCDLSTS AKGLL LRHTLEK+I HNSTDALRHVFASRI +IKDS WNRL Sbjct: 112 RLKVLELRGCDLSTSAAKGLLDLRHTLEKIICHNSTDALRHVFASRITEIKDSPQWNRLS 171 Query: 183 LVSCPCNGL 209 VSC CNGL Sbjct: 172 FVSCACNGL 180 Score = 27.3 bits (59), Expect(2) = 4e-27 Identities = 14/23 (60%), Positives = 18/23 (78%), Gaps = 4/23 (17%) Frame = +1 Query: 214 LLMDDSLQLLPNVE----SRNRF 270 +LMD+SL LLP+VE SRN+F Sbjct: 181 VLMDESLHLLPSVETLDLSRNKF 203 >ref|XP_003530965.1| PREDICTED: uncharacterized protein LOC100788364 [Glycine max] Length = 1091 Score = 117 bits (293), Expect(2) = 7e-27 Identities = 56/69 (81%), Positives = 61/69 (88%) Frame = +3 Query: 3 RLKVLELRGCDLSTSPAKGLLQLRHTLEKLILHNSTDALRHVFASRIVDIKDSAVWNRLF 182 RLKVLELRGCDLSTS AKGLL+LRHTLEK+I HNSTDALRHVFASRI ++K+S WNRL Sbjct: 112 RLKVLELRGCDLSTSAAKGLLELRHTLEKIICHNSTDALRHVFASRITEVKNSPQWNRLS 171 Query: 183 LVSCPCNGL 209 VSC CNGL Sbjct: 172 FVSCACNGL 180 Score = 28.1 bits (61), Expect(2) = 7e-27 Identities = 15/23 (65%), Positives = 18/23 (78%), Gaps = 4/23 (17%) Frame = +1 Query: 214 LLMDDSLQLLPNVE----SRNRF 270 +LMD+SLQLLP VE SRN+F Sbjct: 181 VLMDESLQLLPAVETLDLSRNKF 203 >ref|XP_003524340.1| PREDICTED: uncharacterized protein LOC100800812 [Glycine max] Length = 1026 Score = 117 bits (293), Expect(2) = 7e-27 Identities = 56/69 (81%), Positives = 61/69 (88%) Frame = +3 Query: 3 RLKVLELRGCDLSTSPAKGLLQLRHTLEKLILHNSTDALRHVFASRIVDIKDSAVWNRLF 182 RLKVLELRGCDLSTS AKGLL+LRHTLEK+I HNSTDALRHVFASRI ++K+S WNRL Sbjct: 112 RLKVLELRGCDLSTSAAKGLLELRHTLEKIICHNSTDALRHVFASRITEVKNSPQWNRLS 171 Query: 183 LVSCPCNGL 209 VSC CNGL Sbjct: 172 FVSCACNGL 180 Score = 28.1 bits (61), Expect(2) = 7e-27 Identities = 15/23 (65%), Positives = 18/23 (78%), Gaps = 4/23 (17%) Frame = +1 Query: 214 LLMDDSLQLLPNVE----SRNRF 270 +LMD+SLQLLP VE SRN+F Sbjct: 181 VLMDESLQLLPAVETLDLSRNKF 203 >ref|XP_002278916.2| PREDICTED: uncharacterized protein LOC100250985 [Vitis vinifera] Length = 1089 Score = 114 bits (284), Expect(2) = 3e-26 Identities = 55/69 (79%), Positives = 60/69 (86%) Frame = +3 Query: 3 RLKVLELRGCDLSTSPAKGLLQLRHTLEKLILHNSTDALRHVFASRIVDIKDSAVWNRLF 182 RL+VLELRGCDLSTS A+GLL+LRHTLEK+I HNSTDALRH+FASRIV IKDS W RL Sbjct: 112 RLRVLELRGCDLSTSAARGLLELRHTLEKIICHNSTDALRHLFASRIVAIKDSPQWKRLS 171 Query: 183 LVSCPCNGL 209 VSC CNGL Sbjct: 172 FVSCACNGL 180 Score = 29.3 bits (64), Expect(2) = 3e-26 Identities = 16/23 (69%), Positives = 18/23 (78%), Gaps = 4/23 (17%) Frame = +1 Query: 214 LLMDDSLQLLPNVE----SRNRF 270 LLMD+SLQLLP VE SRN+F Sbjct: 181 LLMDESLQLLPAVETLDLSRNKF 203 >emb|CBI15593.3| unnamed protein product [Vitis vinifera] Length = 992 Score = 114 bits (284), Expect(2) = 3e-26 Identities = 55/69 (79%), Positives = 60/69 (86%) Frame = +3 Query: 3 RLKVLELRGCDLSTSPAKGLLQLRHTLEKLILHNSTDALRHVFASRIVDIKDSAVWNRLF 182 RL+VLELRGCDLSTS A+GLL+LRHTLEK+I HNSTDALRH+FASRIV IKDS W RL Sbjct: 79 RLRVLELRGCDLSTSAARGLLELRHTLEKIICHNSTDALRHLFASRIVAIKDSPQWKRLS 138 Query: 183 LVSCPCNGL 209 VSC CNGL Sbjct: 139 FVSCACNGL 147 Score = 29.3 bits (64), Expect(2) = 3e-26 Identities = 16/23 (69%), Positives = 18/23 (78%), Gaps = 4/23 (17%) Frame = +1 Query: 214 LLMDDSLQLLPNVE----SRNRF 270 LLMD+SLQLLP VE SRN+F Sbjct: 148 LLMDESLQLLPAVETLDLSRNKF 170