BLASTX nr result

ID: Coptis25_contig00003400 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003400
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631131.1| hypothetical protein MTR_8g107440 [Medicago ...   119   4e-27
ref|XP_003530965.1| PREDICTED: uncharacterized protein LOC100788...   117   7e-27
ref|XP_003524340.1| PREDICTED: uncharacterized protein LOC100800...   117   7e-27
ref|XP_002278916.2| PREDICTED: uncharacterized protein LOC100250...   114   3e-26
emb|CBI15593.3| unnamed protein product [Vitis vinifera]              114   3e-26

>ref|XP_003631131.1| hypothetical protein MTR_8g107440 [Medicago truncatula]
           gi|355525153|gb|AET05607.1| hypothetical protein
           MTR_8g107440 [Medicago truncatula]
          Length = 1238

 Score =  119 bits (297), Expect(2) = 4e-27
 Identities = 58/69 (84%), Positives = 60/69 (86%)
 Frame = +3

Query: 3   RLKVLELRGCDLSTSPAKGLLQLRHTLEKLILHNSTDALRHVFASRIVDIKDSAVWNRLF 182
           RLKVLELRGCDLSTS AKGLL LRHTLEK+I HNSTDALRHVFASRI +IKDS  WNRL 
Sbjct: 112 RLKVLELRGCDLSTSAAKGLLDLRHTLEKIICHNSTDALRHVFASRITEIKDSPQWNRLS 171

Query: 183 LVSCPCNGL 209
            VSC CNGL
Sbjct: 172 FVSCACNGL 180



 Score = 27.3 bits (59), Expect(2) = 4e-27
 Identities = 14/23 (60%), Positives = 18/23 (78%), Gaps = 4/23 (17%)
 Frame = +1

Query: 214 LLMDDSLQLLPNVE----SRNRF 270
           +LMD+SL LLP+VE    SRN+F
Sbjct: 181 VLMDESLHLLPSVETLDLSRNKF 203


>ref|XP_003530965.1| PREDICTED: uncharacterized protein LOC100788364 [Glycine max]
          Length = 1091

 Score =  117 bits (293), Expect(2) = 7e-27
 Identities = 56/69 (81%), Positives = 61/69 (88%)
 Frame = +3

Query: 3   RLKVLELRGCDLSTSPAKGLLQLRHTLEKLILHNSTDALRHVFASRIVDIKDSAVWNRLF 182
           RLKVLELRGCDLSTS AKGLL+LRHTLEK+I HNSTDALRHVFASRI ++K+S  WNRL 
Sbjct: 112 RLKVLELRGCDLSTSAAKGLLELRHTLEKIICHNSTDALRHVFASRITEVKNSPQWNRLS 171

Query: 183 LVSCPCNGL 209
            VSC CNGL
Sbjct: 172 FVSCACNGL 180



 Score = 28.1 bits (61), Expect(2) = 7e-27
 Identities = 15/23 (65%), Positives = 18/23 (78%), Gaps = 4/23 (17%)
 Frame = +1

Query: 214 LLMDDSLQLLPNVE----SRNRF 270
           +LMD+SLQLLP VE    SRN+F
Sbjct: 181 VLMDESLQLLPAVETLDLSRNKF 203


>ref|XP_003524340.1| PREDICTED: uncharacterized protein LOC100800812 [Glycine max]
          Length = 1026

 Score =  117 bits (293), Expect(2) = 7e-27
 Identities = 56/69 (81%), Positives = 61/69 (88%)
 Frame = +3

Query: 3   RLKVLELRGCDLSTSPAKGLLQLRHTLEKLILHNSTDALRHVFASRIVDIKDSAVWNRLF 182
           RLKVLELRGCDLSTS AKGLL+LRHTLEK+I HNSTDALRHVFASRI ++K+S  WNRL 
Sbjct: 112 RLKVLELRGCDLSTSAAKGLLELRHTLEKIICHNSTDALRHVFASRITEVKNSPQWNRLS 171

Query: 183 LVSCPCNGL 209
            VSC CNGL
Sbjct: 172 FVSCACNGL 180



 Score = 28.1 bits (61), Expect(2) = 7e-27
 Identities = 15/23 (65%), Positives = 18/23 (78%), Gaps = 4/23 (17%)
 Frame = +1

Query: 214 LLMDDSLQLLPNVE----SRNRF 270
           +LMD+SLQLLP VE    SRN+F
Sbjct: 181 VLMDESLQLLPAVETLDLSRNKF 203


>ref|XP_002278916.2| PREDICTED: uncharacterized protein LOC100250985 [Vitis vinifera]
          Length = 1089

 Score =  114 bits (284), Expect(2) = 3e-26
 Identities = 55/69 (79%), Positives = 60/69 (86%)
 Frame = +3

Query: 3   RLKVLELRGCDLSTSPAKGLLQLRHTLEKLILHNSTDALRHVFASRIVDIKDSAVWNRLF 182
           RL+VLELRGCDLSTS A+GLL+LRHTLEK+I HNSTDALRH+FASRIV IKDS  W RL 
Sbjct: 112 RLRVLELRGCDLSTSAARGLLELRHTLEKIICHNSTDALRHLFASRIVAIKDSPQWKRLS 171

Query: 183 LVSCPCNGL 209
            VSC CNGL
Sbjct: 172 FVSCACNGL 180



 Score = 29.3 bits (64), Expect(2) = 3e-26
 Identities = 16/23 (69%), Positives = 18/23 (78%), Gaps = 4/23 (17%)
 Frame = +1

Query: 214 LLMDDSLQLLPNVE----SRNRF 270
           LLMD+SLQLLP VE    SRN+F
Sbjct: 181 LLMDESLQLLPAVETLDLSRNKF 203


>emb|CBI15593.3| unnamed protein product [Vitis vinifera]
          Length = 992

 Score =  114 bits (284), Expect(2) = 3e-26
 Identities = 55/69 (79%), Positives = 60/69 (86%)
 Frame = +3

Query: 3   RLKVLELRGCDLSTSPAKGLLQLRHTLEKLILHNSTDALRHVFASRIVDIKDSAVWNRLF 182
           RL+VLELRGCDLSTS A+GLL+LRHTLEK+I HNSTDALRH+FASRIV IKDS  W RL 
Sbjct: 79  RLRVLELRGCDLSTSAARGLLELRHTLEKIICHNSTDALRHLFASRIVAIKDSPQWKRLS 138

Query: 183 LVSCPCNGL 209
            VSC CNGL
Sbjct: 139 FVSCACNGL 147



 Score = 29.3 bits (64), Expect(2) = 3e-26
 Identities = 16/23 (69%), Positives = 18/23 (78%), Gaps = 4/23 (17%)
 Frame = +1

Query: 214 LLMDDSLQLLPNVE----SRNRF 270
           LLMD+SLQLLP VE    SRN+F
Sbjct: 148 LLMDESLQLLPAVETLDLSRNKF 170


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