BLASTX nr result

ID: Coptis25_contig00003398 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003398
         (1418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272712.1| PREDICTED: uncharacterized protein C20orf4 h...   521   e-145
ref|XP_002301711.1| predicted protein [Populus trichocarpa] gi|2...   485   e-134
ref|XP_002534269.1| Protein C20orf4, putative [Ricinus communis]...   485   e-134
ref|XP_003544236.1| PREDICTED: uncharacterized protein C20orf4 h...   482   e-133
ref|XP_003616397.1| hypothetical protein MTR_5g079770 [Medicago ...   480   e-133

>ref|XP_002272712.1| PREDICTED: uncharacterized protein C20orf4 homolog [Vitis vinifera]
            gi|296087181|emb|CBI33555.3| unnamed protein product
            [Vitis vinifera]
          Length = 394

 Score =  521 bits (1343), Expect = e-145
 Identities = 261/387 (67%), Positives = 297/387 (76%)
 Frame = -3

Query: 1410 ETARELVKKGGTLLLLDVPQFTLFGIDTQVFSTGPNFKGVKMIPPGPHFVYYSSSTRDGS 1231
            ETA  LV+ G TLLLLDVPQFTL GIDT +FS GP FKG+KMIPPGPHFVYYSSS RDGS
Sbjct: 4    ETALGLVRNGATLLLLDVPQFTLIGIDTLMFSVGPVFKGIKMIPPGPHFVYYSSSNRDGS 63

Query: 1230 EFSPIVGFFIYTYPSQVIVRKWDQQXXXXXXXXXXXXXRYWAAVKNFKFDSHLGPYALNH 1051
            +FSPIVGFFI T PS+VIVRKWDQQ             RY  +VK+ +FD  LGPY L+ 
Sbjct: 64   KFSPIVGFFIDTCPSEVIVRKWDQQDERLVKLSEEEEERYCQSVKSLEFDRELGPYTLSQ 123

Query: 1050 FGDWKNMFNYITKSTIERIEPIGGEIAVTHESELADTVHKTAMEKALVEQLRNSKFSKSS 871
            +GDWK + N ITK+TIERIEPIGGEI V HESE+     KT+MEKAL +QLRNSKFSKS+
Sbjct: 124  YGDWKRLSNSITKTTIERIEPIGGEITVAHESEMVGNTPKTSMEKALDQQLRNSKFSKSA 183

Query: 870  EKVNNRNCYYTPIPRDVKRKGISGEELTSLNLDKTQLLETILTKHYGGVEDLLLGELQFA 691
            +K   R CYYT IPR +KRKGI G+ELTSLNLDKTQLLE+IL K YGG EDLLLGELQFA
Sbjct: 184  DKSQKRGCYYTSIPRVIKRKGIHGQELTSLNLDKTQLLESILMKDYGGSEDLLLGELQFA 243

Query: 690  FVAFLMGQSLQAFLQWKAIVTLLFSCTEAPFSTRSHLFTKFVKVIYHQMKFGLQNDHTSI 511
            F+AFLMGQSL+ FLQWK++V+LLF C EAPF TRS LFTKF++VIY+Q+KFG Q D T  
Sbjct: 244  FIAFLMGQSLEGFLQWKSLVSLLFGCNEAPFHTRSLLFTKFIRVIYYQLKFGFQKDQTGS 303

Query: 510  SGHEKGTVFFLDDSWFSKDNFLHHLCKEFFLLVLEASVVDGDLLSWXXXXXXXXXXXLGW 331
            S  EK +   LD+SW S D+FLHHLCK+FF LV EASVVDGDLLSW           LGW
Sbjct: 304  SNVEKESSLLLDESWLSADSFLHHLCKDFFSLVQEASVVDGDLLSWTRKLRDLLENTLGW 363

Query: 330  DFQQNSAACDFYGEDDEYAPVVEMLDD 250
            DFQQ S     Y E+DE+APVVEML+D
Sbjct: 364  DFQQTSTVDGLYCEEDEFAPVVEMLED 390


>ref|XP_002301711.1| predicted protein [Populus trichocarpa] gi|222843437|gb|EEE80984.1|
            predicted protein [Populus trichocarpa]
          Length = 402

 Score =  485 bits (1249), Expect = e-134
 Identities = 241/396 (60%), Positives = 301/396 (76%), Gaps = 3/396 (0%)
 Frame = -3

Query: 1416 DVETARELVKKGGTLLLLDVPQFTLFGIDTQVFSTGPNFKGVKMIPPGPHFVYYSSSTRD 1237
            D ETA ELVK+G TLLLLDVPQ+TL GIDTQ+F+ GP FKG+KMIPPGPHFVYYSSS++D
Sbjct: 2    DPETALELVKQGATLLLLDVPQYTLVGIDTQMFTVGPAFKGIKMIPPGPHFVYYSSSSKD 61

Query: 1236 GSEFSPIVGFFIYTYPSQVIVRKWDQQXXXXXXXXXXXXXRYWAAVKNFKFDSHLGPYAL 1057
            G +FSPIVGFF+   PS+VIVRKW+QQ             R+  AVK+ +FD +LGPY L
Sbjct: 62   GKQFSPIVGFFVDADPSEVIVRKWNQQEERLVKVPEDEEERFCQAVKSLEFDRYLGPYNL 121

Query: 1056 NHFGDWKNMFNYITKSTIERIEPIGGEIAVTHESELADTVHKTAMEKALVEQLRNSKFSK 877
            + +G+WK + +Y+TK+ I+RIEPIGGEI V  ESE+     KT++E+AL  QL   KFS 
Sbjct: 122  SQYGEWKQLSSYLTKTIIKRIEPIGGEITVACESEMDKNSPKTSIERALHAQLGTGKFSA 181

Query: 876  SS--EKVNNRNCYYTPIPRDVKRKGISGEELTSLNLDKTQLLETILTKHYGGVEDLLLGE 703
            S+  ++   R CYYT IPR +KR+G+ G+ELTSLNLDKT+LLE++L K YGG EDLLLGE
Sbjct: 182  STSVDRSKKRGCYYTTIPRVIKRRGMEGKELTSLNLDKTELLESVLIKDYGGSEDLLLGE 241

Query: 702  LQFAFVAFLMGQSLQAFLQWKAIVTLLFSCTEAPFSTRSHLFTKFVKVIYHQMKFGLQND 523
            LQFA++AFLMGQSL+AF QWK++V+LL SC EAPF TRSHLFTKF+KVI++Q+K+GLQ D
Sbjct: 242  LQFAYIAFLMGQSLEAFFQWKSLVSLLLSCIEAPFRTRSHLFTKFIKVIFYQLKYGLQKD 301

Query: 522  HTSISGHEKGTVFFLDDSWFSKDNFLHHLCKEFFLLVLEASVVDGDLLSWXXXXXXXXXX 343
                +G        LD+SWFS D+FLH LCK+FFLLVL+A+VVDGDLL+W          
Sbjct: 302  RKESNGAGIAVSSLLDESWFSADSFLHRLCKDFFLLVLDATVVDGDLLTWTRKLKELLEN 361

Query: 342  XLGWDFQQNSAACDFY-GEDDEYAPVVEMLDDMNFH 238
             LGW+FQQNSA    Y  EDDE+APVVEMLD+ +F+
Sbjct: 362  ILGWEFQQNSAVDGIYFEEDDEFAPVVEMLDESSFN 397


>ref|XP_002534269.1| Protein C20orf4, putative [Ricinus communis]
            gi|223525600|gb|EEF28112.1| Protein C20orf4, putative
            [Ricinus communis]
          Length = 409

 Score =  485 bits (1248), Expect = e-134
 Identities = 246/399 (61%), Positives = 296/399 (74%), Gaps = 4/399 (1%)
 Frame = -3

Query: 1416 DVETARELVKKGGTLLLLDVPQFTLFGIDTQVFSTGPNFKGVKMIPPGPHFVYYSSSTRD 1237
            D ETA + VK+G TLLLLDVPQ+TLFGIDTQVF+ GP FKGVKMIPPG HFVYYSSS+RD
Sbjct: 5    DPETALDFVKQGATLLLLDVPQYTLFGIDTQVFTVGPAFKGVKMIPPGTHFVYYSSSSRD 64

Query: 1236 GSEFSPIVGFFIYTYPSQVIVRKWDQQXXXXXXXXXXXXXRYWAAVKNFKFDSHLGPYAL 1057
            G +FSPI+GFF+   PS+VIVRKW +Q             R+  AVK+ +FD +LGPY L
Sbjct: 65   GKDFSPIIGFFVDAGPSEVIVRKWVRQEERLVKVSEEEEERFSQAVKSLEFDRNLGPYNL 124

Query: 1056 NHFGDWKNMFNYITKSTIERIEPIGGEIAVTHESELADTVHKTAMEKALVEQLRNSKFSK 877
            N +G+WK + NY+ K+ IERIEPIGGEI +  ES +  +  KTAMEKAL EQLRNSK S 
Sbjct: 125  NQYGEWKRLSNYVRKNVIERIEPIGGEITIESESGITRSSPKTAMEKALDEQLRNSKCSV 184

Query: 876  SS--EKVNNRNCYYTPIPRDVKRKGISGEELTSLNLDKTQLLETILTKHYGGVEDLLLGE 703
            S+  +K   R CYYT IP  +KR+GI   ELTSLNLDKT+LLE IL K YGG EDLL+GE
Sbjct: 185  SASVDKAEKRGCYYTSIPHVIKRRGIYSAELTSLNLDKTELLENILVKDYGGSEDLLIGE 244

Query: 702  LQFAFVAFLMGQSLQAFLQWKAIVTLLFSCTEAPFSTRSHLFTKFVKVIYHQMKFGLQND 523
            LQFAF+AFLMGQSL+AF QWK++V+LL  CTEAP  TRS LFTKF+KVIY+Q+K+GLQ D
Sbjct: 245  LQFAFIAFLMGQSLEAFFQWKSLVSLLLGCTEAPLRTRSRLFTKFIKVIYYQLKYGLQKD 304

Query: 522  HTSISGHEKGTVFFLDDSWFSKDNFLHHLCKEFFLLVLEASVVDGDLLSWXXXXXXXXXX 343
                +    G    LD+SWFS D+FLH LCK+FFLLV +ASVVDGDLL+W          
Sbjct: 305  KAETNDAGVGVSTLLDESWFSADSFLHQLCKDFFLLVQDASVVDGDLLTWTRKLKELLES 364

Query: 342  XLGWDFQQNSAACD--FYGEDDEYAPVVEMLDDMNFHEA 232
             LGW+FQQNSA  D  ++ ++DEYAPVV MLDD + +EA
Sbjct: 365  SLGWEFQQNSAMDDGIYFEDNDEYAPVVVMLDDTSNNEA 403


>ref|XP_003544236.1| PREDICTED: uncharacterized protein C20orf4 homolog [Glycine max]
          Length = 391

 Score =  482 bits (1240), Expect = e-133
 Identities = 248/390 (63%), Positives = 286/390 (73%), Gaps = 1/390 (0%)
 Frame = -3

Query: 1416 DVETARELVKKGGTLLLLDVPQFTLFGIDTQVFSTGPNFKGVKMIPPGPHFVYYSSSTRD 1237
            D ETA ELVK G TLLLLDVPQ+TL  +DTQ+FS GP FKG+KMIPPG HFVYYSSS+RD
Sbjct: 2    DPETALELVKHGVTLLLLDVPQYTLVAVDTQMFSVGPAFKGIKMIPPGVHFVYYSSSSRD 61

Query: 1236 GSEFSPIVGFFIYTYPSQVIVRKWDQQXXXXXXXXXXXXXRYWAAVKNFKFDSHLGPYAL 1057
            G EFS I+GFFI   PS+VIVRKWDQQ             RY  AVKN +FD  LGPY L
Sbjct: 62   GKEFSSIIGFFIDAGPSEVIVRKWDQQEERLIKLSEEEEERYSQAVKNLEFDRQLGPYNL 121

Query: 1056 NHFGDWKNMFNYITKSTIERIEPIGGEIAVTHESELADTVHKTAMEKALVEQLRNSKFSK 877
            +H+ DWK + N+ITKS IER+EPIGGEI V  E+E+     K  ME AL +QL+    + 
Sbjct: 122  SHYEDWKQLSNFITKSVIERLEPIGGEITVECENEIVRNATKMPMEDALGKQLKVGNSAT 181

Query: 876  SSEKVNNRNCYYTPIPRDVKRKGISGEELTSLNLDKTQLLETILTKHYGGVEDLLLGELQ 697
            S  K   + CYYT IP  VK KGISG+ELTSLNLDKTQLLET+L K YGG EDLLLGELQ
Sbjct: 182  SVGKSQRKGCYYTSIPHVVKCKGISGQELTSLNLDKTQLLETLLAKDYGGSEDLLLGELQ 241

Query: 696  FAFVAFLMGQSLQAFLQWKAIVTLLFSCTEAPFSTRSHLFTKFVKVIYHQMKFGLQNDHT 517
            FAFVAFLMGQSL+AFLQWK++V+LLF CTEAPF TR+HLFTKF+KVIY+Q+K+GLQ DH 
Sbjct: 242  FAFVAFLMGQSLEAFLQWKSLVSLLFGCTEAPFRTRTHLFTKFIKVIYNQLKYGLQKDHM 301

Query: 516  SISGHEKGTVFFLDDSWFSKDNFLHHLCKEFFLLVLEASVVDGDLLSWXXXXXXXXXXXL 337
              +G        LDDSW S D+FLHHLCK+FF  +L+ SVVDGDLL W           L
Sbjct: 302  GETGSA-----LLDDSWISADSFLHHLCKDFFSSLLDGSVVDGDLLKWTRKFKELLERNL 356

Query: 336  GWDFQQNSAACDFY-GEDDEYAPVVEMLDD 250
            GW+FQQ+SA    Y  E+DEYAPVVEMLDD
Sbjct: 357  GWEFQQSSAVDGMYFEENDEYAPVVEMLDD 386


>ref|XP_003616397.1| hypothetical protein MTR_5g079770 [Medicago truncatula]
            gi|355517732|gb|AES99355.1| hypothetical protein
            MTR_5g079770 [Medicago truncatula]
          Length = 391

 Score =  480 bits (1236), Expect = e-133
 Identities = 244/390 (62%), Positives = 287/390 (73%), Gaps = 1/390 (0%)
 Frame = -3

Query: 1416 DVETARELVKKGGTLLLLDVPQFTLFGIDTQVFSTGPNFKGVKMIPPGPHFVYYSSSTRD 1237
            D +TA ELVK G TLL LDVPQ+TL  IDTQVFS GP FKG+KMIPPG HFVYYSSSTRD
Sbjct: 2    DSQTALELVKNGVTLLFLDVPQYTLVAIDTQVFSVGPTFKGIKMIPPGTHFVYYSSSTRD 61

Query: 1236 GSEFSPIVGFFIYTYPSQVIVRKWDQQXXXXXXXXXXXXXRYWAAVKNFKFDSHLGPYAL 1057
            G EFSP++GFFI   PS+VIVRKWDQQ             RY  AVKN +FD  LGPY L
Sbjct: 62   GKEFSPMIGFFIDAGPSEVIVRKWDQQEERLVKVSEEEDERYRLAVKNMEFDRQLGPYNL 121

Query: 1056 NHFGDWKNMFNYITKSTIERIEPIGGEIAVTHESELADTVHKTAMEKALVEQLRNSKFSK 877
            +H+ DWK + ++ITKS IER+EPIGGE++V  E+++     KT MEKAL  QL+    + 
Sbjct: 122  SHYEDWKRLSDFITKSIIERLEPIGGEVSVECENDMFRNAPKTPMEKALDTQLKVDNSAT 181

Query: 876  SSEKVNNRNCYYTPIPRDVKRKGISGEELTSLNLDKTQLLETILTKHYGGVEDLLLGELQ 697
            S  K+  + CYYT IPR VK KGISG+ELTSLNLDKTQLLET+L K YGG EDLLLGELQ
Sbjct: 182  SVGKLQRKGCYYTSIPRVVKCKGISGQELTSLNLDKTQLLETLLVKDYGGSEDLLLGELQ 241

Query: 696  FAFVAFLMGQSLQAFLQWKAIVTLLFSCTEAPFSTRSHLFTKFVKVIYHQMKFGLQNDHT 517
            FAF+A +MGQSL+AFLQWK++V+LL  CTEAPF TR+ LFTKF+KVIY+Q+K+GLQ D  
Sbjct: 242  FAFIALMMGQSLEAFLQWKSLVSLLLGCTEAPFHTRTRLFTKFIKVIYYQLKYGLQKDRK 301

Query: 516  SISGHEKGTVFFLDDSWFSKDNFLHHLCKEFFLLVLEASVVDGDLLSWXXXXXXXXXXXL 337
              +G        LDDSWFS D+FLHH CKEFF LVL+ SV+DGDLL W           L
Sbjct: 302  DNTG-----PLLLDDSWFSTDSFLHHHCKEFFSLVLDGSVIDGDLLKWTRKFKKLLESNL 356

Query: 336  GWDFQQNSAACDFY-GEDDEYAPVVEMLDD 250
            GW+FQQN+A    Y  E+DE+APVVEMLDD
Sbjct: 357  GWEFQQNNAVDGLYFDENDEFAPVVEMLDD 386


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