BLASTX nr result

ID: Coptis25_contig00003396 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003396
         (610 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001242220.1| uncharacterized protein LOC100790612 [Glycin...   105   8e-21
gb|ACU13535.1| unknown [Glycine max]                                  105   8e-21
ref|XP_003549915.1| PREDICTED: protein CWC15 homolog [Glycine max]    101   9e-20
ref|XP_002298880.1| predicted protein [Populus trichocarpa] gi|2...   101   9e-20
gb|AFK49379.1| unknown [Medicago truncatula]                          100   3e-19

>ref|NP_001242220.1| uncharacterized protein LOC100790612 [Glycine max]
           gi|255639321|gb|ACU19958.1| unknown [Glycine max]
          Length = 213

 Score =  105 bits (261), Expect = 8e-21
 Identities = 47/59 (79%), Positives = 54/59 (91%)
 Frame = -3

Query: 272 VRGNPLLNNNTSAHIVKKRWDEDVVFKNQTRGETKATKRFINDTIRSDFHRKFLHKYMK 96
           +RGNPLLNN T++  VK+RWD+DVVFKNQ+RGETK  KRFINDTIR+DFHRKFLHKYMK
Sbjct: 155 LRGNPLLNNPTASFNVKRRWDDDVVFKNQSRGETKTAKRFINDTIRNDFHRKFLHKYMK 213


>gb|ACU13535.1| unknown [Glycine max]
          Length = 228

 Score =  105 bits (261), Expect = 8e-21
 Identities = 47/59 (79%), Positives = 54/59 (91%)
 Frame = -3

Query: 272 VRGNPLLNNNTSAHIVKKRWDEDVVFKNQTRGETKATKRFINDTIRSDFHRKFLHKYMK 96
           +RGNPLLNN T++  VK+RWD+DVVFKNQ+RGETK  KRFINDTIR+DFHRKFLHKYMK
Sbjct: 170 LRGNPLLNNPTASFNVKRRWDDDVVFKNQSRGETKTAKRFINDTIRNDFHRKFLHKYMK 228


>ref|XP_003549915.1| PREDICTED: protein CWC15 homolog [Glycine max]
          Length = 228

 Score =  101 bits (252), Expect = 9e-20
 Identities = 46/59 (77%), Positives = 52/59 (88%)
 Frame = -3

Query: 272 VRGNPLLNNNTSAHIVKKRWDEDVVFKNQTRGETKATKRFINDTIRSDFHRKFLHKYMK 96
           +RGNPLLNN T++  VK+RWD+DVVFKNQ RGETK  KRFINDTIR+DFHRKFL KYMK
Sbjct: 170 LRGNPLLNNPTASFNVKRRWDDDVVFKNQARGETKTAKRFINDTIRNDFHRKFLQKYMK 228


>ref|XP_002298880.1| predicted protein [Populus trichocarpa] gi|222846138|gb|EEE83685.1|
           predicted protein [Populus trichocarpa]
          Length = 230

 Score =  101 bits (252), Expect = 9e-20
 Identities = 46/59 (77%), Positives = 51/59 (86%)
 Frame = -3

Query: 272 VRGNPLLNNNTSAHIVKKRWDEDVVFKNQTRGETKATKRFINDTIRSDFHRKFLHKYMK 96
           +RGNPLLNN T+   VK+RWD+DVVFKNQ RGETK  KRFINDTIR+DFHRKFL KYMK
Sbjct: 172 LRGNPLLNNTTTTFNVKRRWDDDVVFKNQARGETKTPKRFINDTIRNDFHRKFLQKYMK 230


>gb|AFK49379.1| unknown [Medicago truncatula]
          Length = 227

 Score =  100 bits (248), Expect = 3e-19
 Identities = 47/59 (79%), Positives = 52/59 (88%)
 Frame = -3

Query: 272 VRGNPLLNNNTSAHIVKKRWDEDVVFKNQTRGETKATKRFINDTIRSDFHRKFLHKYMK 96
           +RGNPL+NN TS   VK+RWD+DVVFKNQ RGETK  KRFINDTIR+DFHRKFLHKYMK
Sbjct: 170 MRGNPLINNPTSFS-VKRRWDDDVVFKNQARGETKLAKRFINDTIRNDFHRKFLHKYMK 227


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