BLASTX nr result

ID: Coptis25_contig00003383 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003383
         (1430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283371.1| PREDICTED: histone deacetylase 19-like [Viti...   802   0.0  
ref|XP_003633720.1| PREDICTED: histone deacetylase 19-like [Viti...   793   0.0  
ref|XP_002313564.1| histone deacetylase [Populus trichocarpa] gi...   783   0.0  
ref|XP_003543935.1| PREDICTED: histone deacetylase 19-like [Glyc...   783   0.0  
ref|XP_002328151.1| histone deacetylase [Populus trichocarpa] gi...   780   0.0  

>ref|XP_002283371.1| PREDICTED: histone deacetylase 19-like [Vitis vinifera]
          Length = 502

 Score =  802 bits (2071), Expect = 0.0
 Identities = 384/444 (86%), Positives = 401/444 (90%), Gaps = 1/444 (0%)
 Frame = -2

Query: 1330 MEIGGNSLPSGPDGVKRKISYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ 1151
            M+ GGNSLPSG DGVKRK+SYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ
Sbjct: 1    MDTGGNSLPSGADGVKRKVSYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ 60

Query: 1150 VLKPFPARDRDLCRFHADDYVTFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLYNYCQT 971
            VLKPFPARDRDLCRFHADDYV+FLR ITPETQQDQLRQLKRFNVGEDCPVFDGLY++CQT
Sbjct: 61   VLKPFPARDRDLCRFHADDYVSFLRGITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQT 120

Query: 970  YAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLY 791
            YAGGSVGGAVKLNHGLCDIA+NWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLY
Sbjct: 121  YAGGSVGGAVKLNHGLCDIAVNWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLY 180

Query: 790  VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDVRDVGHGKGKYYSLNVPLDDGI 611
            VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGD+RD+G GKGKYYSLNVPLDDGI
Sbjct: 181  VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGFGKGKYYSLNVPLDDGI 240

Query: 610  DDETYQSLFKPIVGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSFN 431
            DDE+Y  LFKPI+GKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSFN
Sbjct: 241  DDESYHFLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSFN 300

Query: 430  VPLLLVGGGGYTIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDYNLHVAPSNMEN 251
            VPLLL+GGGGYTIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDY LHVAPSNMEN
Sbjct: 301  VPLLLLGGGGYTIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDYTLHVAPSNMEN 360

Query: 250  KNSRQLLEEIRVKLLDNLTKLRHAPSVQFQERXXXXXXXXXXXXXXXXXXXXXXXXDME- 74
            KNS Q+L+EIR KLLDNL+KLRHAPSVQFQER                        DME 
Sbjct: 361  KNSHQILDEIRAKLLDNLSKLRHAPSVQFQERPPDTELPEADEDHDDGDERWDPESDMEV 420

Query: 73   DTERKPLSNNLQNANVKREVIEPE 2
            D E KPL      + VKRE++EPE
Sbjct: 421  DEEHKPLP-----SRVKREIVEPE 439


>ref|XP_003633720.1| PREDICTED: histone deacetylase 19-like [Vitis vinifera]
            gi|296087188|emb|CBI33562.3| unnamed protein product
            [Vitis vinifera]
          Length = 502

 Score =  793 bits (2048), Expect = 0.0
 Identities = 381/444 (85%), Positives = 397/444 (89%), Gaps = 1/444 (0%)
 Frame = -2

Query: 1330 MEIGGNSLPSGPDGVKRKISYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ 1151
            M+ GGNSLPSG DGVKRK+SYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ
Sbjct: 1    MDTGGNSLPSGADGVKRKVSYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ 60

Query: 1150 VLKPFPARDRDLCRFHADDYVTFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLYNYCQT 971
            VLKP PARDRDLCRFHADDYV+FLR ITPETQQDQLRQLKRFNVGEDCPVFDGLY++CQT
Sbjct: 61   VLKPCPARDRDLCRFHADDYVSFLRGITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQT 120

Query: 970  YAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLY 791
            YAGGSVGGAVKLNHG CDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLY
Sbjct: 121  YAGGSVGGAVKLNHGFCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLY 180

Query: 790  VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDVRDVGHGKGKYYSLNVPLDDGI 611
            VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGD+RD+G GKGKYYSLNVPLDDGI
Sbjct: 181  VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGFGKGKYYSLNVPLDDGI 240

Query: 610  DDETYQSLFKPIVGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSFN 431
            DDE+Y  LFKPI+GKVME+FRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVR+MRSFN
Sbjct: 241  DDESYHCLFKPIIGKVMEIFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRFMRSFN 300

Query: 430  VPLLLVGGGGYTIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDYNLHVAPSNMEN 251
            VPLLL+GGGGYTIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDY LHVAPSNMEN
Sbjct: 301  VPLLLLGGGGYTIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDYTLHVAPSNMEN 360

Query: 250  KNSRQLLEEIRVKLLDNLTKLRHAPSVQFQERXXXXXXXXXXXXXXXXXXXXXXXXDME- 74
            KNS QLL+EIR KLLDNL+ LRHAPSVQFQER                        DME 
Sbjct: 361  KNSHQLLDEIRAKLLDNLSTLRHAPSVQFQERPPDTELPEADEDHDDGDERWDPDSDMEI 420

Query: 73   DTERKPLSNNLQNANVKREVIEPE 2
            D ERK L        VKRE++EPE
Sbjct: 421  DDERKSLP-----GRVKREIVEPE 439


>ref|XP_002313564.1| histone deacetylase [Populus trichocarpa] gi|118486921|gb|ABK95294.1|
            unknown [Populus trichocarpa] gi|222849972|gb|EEE87519.1|
            histone deacetylase [Populus trichocarpa]
          Length = 499

 Score =  783 bits (2023), Expect = 0.0
 Identities = 378/445 (84%), Positives = 398/445 (89%), Gaps = 2/445 (0%)
 Frame = -2

Query: 1330 MEIGGNSLPSG-PDGVKRKISYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHM 1154
            M+ GGNSLPS  PDGVKRK+ YFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHM
Sbjct: 1    MDTGGNSLPSAAPDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHM 60

Query: 1153 QVLKPFPARDRDLCRFHADDYVTFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLYNYCQ 974
            QVLKPFPARDRDLCRFHADDYV+FLRSITPETQQDQLRQLKRFNVGEDCPVFDGLY++CQ
Sbjct: 61   QVLKPFPARDRDLCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQ 120

Query: 973  TYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVL 794
            TYAGGSVGGAVKLNH LCDIA+NWAGGLHHAKKCEASGFCYVNDIVLAILELLK HERVL
Sbjct: 121  TYAGGSVGGAVKLNHNLCDIAVNWAGGLHHAKKCEASGFCYVNDIVLAILELLKVHERVL 180

Query: 793  YVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDVRDVGHGKGKYYSLNVPLDDG 614
            YVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGD+RD+G  KGKYYSLNVPLDDG
Sbjct: 181  YVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGFSKGKYYSLNVPLDDG 240

Query: 613  IDDETYQSLFKPIVGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSF 434
            IDDE+Y  LFKP++GKVMEVF+PGAVVLQCGADSLSGDRLGCFNLSIKGHAECV+YMRSF
Sbjct: 241  IDDESYHFLFKPLIGKVMEVFKPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKYMRSF 300

Query: 433  NVPLLLVGGGGYTIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDYNLHVAPSNME 254
            NVPLLL+GGGGYTIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDY LHVAPSNME
Sbjct: 301  NVPLLLLGGGGYTIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDYTLHVAPSNME 360

Query: 253  NKNSRQLLEEIRVKLLDNLTKLRHAPSVQFQERXXXXXXXXXXXXXXXXXXXXXXXXDME 74
            NKNS QLLEEIR KLLDNL+KL+HAPSVQFQER                        DM+
Sbjct: 361  NKNSFQLLEEIRSKLLDNLSKLQHAPSVQFQERPPDTELLEAEEDQDDADERWDPDSDMD 420

Query: 73   -DTERKPLSNNLQNANVKREVIEPE 2
             D ERKPL      + VKRE++E E
Sbjct: 421  VDDERKPLP-----SRVKREIVEAE 440


>ref|XP_003543935.1| PREDICTED: histone deacetylase 19-like [Glycine max]
          Length = 497

 Score =  783 bits (2021), Expect = 0.0
 Identities = 375/444 (84%), Positives = 397/444 (89%), Gaps = 1/444 (0%)
 Frame = -2

Query: 1330 MEIGGNSLPSGPDGVKRKISYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ 1151
            M+ GGNSLPS PDGVKRK+ YFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ
Sbjct: 1    MDTGGNSLPSAPDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ 60

Query: 1150 VLKPFPARDRDLCRFHADDYVTFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLYNYCQT 971
            V KPFPARDRDLCRFHADDYV FLRSITPETQQD LRQLKRFNVGEDCPVFDGLY++CQT
Sbjct: 61   VHKPFPARDRDLCRFHADDYVAFLRSITPETQQDHLRQLKRFNVGEDCPVFDGLYSFCQT 120

Query: 970  YAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLY 791
            YAGGSVGGAVKLNH  CDIA+NWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLY
Sbjct: 121  YAGGSVGGAVKLNHDQCDIAVNWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLY 180

Query: 790  VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDVRDVGHGKGKYYSLNVPLDDGI 611
            VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDVRD+G+GKGKYYSLNVPLDDGI
Sbjct: 181  VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDVRDIGYGKGKYYSLNVPLDDGI 240

Query: 610  DDETYQSLFKPIVGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSFN 431
            DDE+Y  LFKPI+GKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSI+GHAECV+YMRSFN
Sbjct: 241  DDESYHFLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVKYMRSFN 300

Query: 430  VPLLLVGGGGYTIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDYNLHVAPSNMEN 251
            VPLLL+GGGGYTIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDY LHVAPSNMEN
Sbjct: 301  VPLLLLGGGGYTIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDYTLHVAPSNMEN 360

Query: 250  KNSRQLLEEIRVKLLDNLTKLRHAPSVQFQERXXXXXXXXXXXXXXXXXXXXXXXXDME- 74
            KNSR LLEEIR KLL+NL+KL+HAPSVQFQER                        DM+ 
Sbjct: 361  KNSRHLLEEIRSKLLENLSKLQHAPSVQFQERPPDSDLGEADEDHDDGDEPWDPDSDMDV 420

Query: 73   DTERKPLSNNLQNANVKREVIEPE 2
            D ER+     L ++ VK+E+ EP+
Sbjct: 421  DVERE-----LVSSKVKKEIAEPQ 439


>ref|XP_002328151.1| histone deacetylase [Populus trichocarpa] gi|222837666|gb|EEE76031.1|
            histone deacetylase [Populus trichocarpa]
          Length = 501

 Score =  780 bits (2014), Expect = 0.0
 Identities = 375/445 (84%), Positives = 397/445 (89%), Gaps = 2/445 (0%)
 Frame = -2

Query: 1330 MEIGGNSLPSG-PDGVKRKISYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHM 1154
            M+ GGNSL S  PDGVKRK+ YFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHM
Sbjct: 1    MDTGGNSLSSAAPDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHM 60

Query: 1153 QVLKPFPARDRDLCRFHADDYVTFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLYNYCQ 974
            QVLKPFPARDRDLCRFHADDYV+FLRSITPETQQDQLRQLKRFNVGEDCPVFDGLY++CQ
Sbjct: 61   QVLKPFPARDRDLCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQ 120

Query: 973  TYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVL 794
            TYAGGSVGGAVKLNH LCDIA+NWAGGLHHAKKCEASGFCYVNDIVLAILELLK HERVL
Sbjct: 121  TYAGGSVGGAVKLNHNLCDIAVNWAGGLHHAKKCEASGFCYVNDIVLAILELLKVHERVL 180

Query: 793  YVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDVRDVGHGKGKYYSLNVPLDDG 614
            YVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDVRD+G+ KGKYYSLNVPLDDG
Sbjct: 181  YVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDVRDIGYSKGKYYSLNVPLDDG 240

Query: 613  IDDETYQSLFKPIVGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSF 434
            IDDE+Y  LFKP++GKVMEVF+PGAV+LQCGADSLSGDRLGCFNLSIKGHAECV++MRSF
Sbjct: 241  IDDESYHFLFKPLIGKVMEVFKPGAVILQCGADSLSGDRLGCFNLSIKGHAECVKFMRSF 300

Query: 433  NVPLLLVGGGGYTIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDYNLHVAPSNME 254
            NVPLLL+GGGGYTIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDY LHVAPSNME
Sbjct: 301  NVPLLLLGGGGYTIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDYTLHVAPSNME 360

Query: 253  NKNSRQLLEEIRVKLLDNLTKLRHAPSVQFQERXXXXXXXXXXXXXXXXXXXXXXXXDME 74
            NKNS Q+LEEIR KLLDNL+KL+HAPSVQFQER                        DM+
Sbjct: 361  NKNSHQVLEEIRCKLLDNLSKLQHAPSVQFQERVPDTELPEAEEEQNEADERWDPDSDMD 420

Query: 73   -DTERKPLSNNLQNANVKREVIEPE 2
             D ERKPL        VKRE++E E
Sbjct: 421  VDEERKPLP-----GRVKREIVEAE 440


Top