BLASTX nr result

ID: Coptis25_contig00003366 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003366
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67132.1| hypothetical protein VITISV_040173 [Vitis vinifera]   192   2e-47
emb|CBI37064.3| unnamed protein product [Vitis vinifera]              191   7e-47
ref|XP_002274039.1| PREDICTED: probable calcium-activated outwar...   191   7e-47
ref|XP_002320260.1| outward rectifying potassium channel [Populu...   185   3e-45
ref|XP_002302805.1| outward rectifying potassium channel [Populu...   182   2e-44

>emb|CAN67132.1| hypothetical protein VITISV_040173 [Vitis vinifera]
          Length = 390

 Score =  192 bits (488), Expect = 2e-47
 Identities = 96/113 (84%), Positives = 102/113 (90%)
 Frame = +2

Query: 2   KVGFALGVVVLCIGSGIMILCFVEKLSWIDSVYLSVMSVTTVGYGDRAFKTLAGRLFASI 181
           KVG ALGVVVLCIG G M+L FVE L WID+VYLSVMSVTTVGYGDRAFKTL GRLFA+I
Sbjct: 229 KVGLALGVVVLCIGMGTMVLYFVENLDWIDAVYLSVMSVTTVGYGDRAFKTLPGRLFAAI 288

Query: 182 WLLFSTLAVARAFLYLAEARIGKRQRRIVKWVLQRDITVQDLLAADVNNNGFI 340
           WLLFSTLAVARAFLYLAEARI KR RRI KWVL R+ITV+DLLAAD+NNNGFI
Sbjct: 289 WLLFSTLAVARAFLYLAEARIDKRHRRITKWVLHREITVEDLLAADINNNGFI 341


>emb|CBI37064.3| unnamed protein product [Vitis vinifera]
          Length = 215

 Score =  191 bits (484), Expect = 7e-47
 Identities = 95/113 (84%), Positives = 102/113 (90%)
 Frame = +2

Query: 2   KVGFALGVVVLCIGSGIMILCFVEKLSWIDSVYLSVMSVTTVGYGDRAFKTLAGRLFASI 181
           KVG ALGVVVLCIG G M+L FVE L WID+VYLSVMSVT+VGYGDRAFKTL GRLFA+I
Sbjct: 54  KVGLALGVVVLCIGMGTMVLYFVENLDWIDAVYLSVMSVTSVGYGDRAFKTLPGRLFAAI 113

Query: 182 WLLFSTLAVARAFLYLAEARIGKRQRRIVKWVLQRDITVQDLLAADVNNNGFI 340
           WLLFSTLAVARAFLYLAEARI KR RRI KWVL R+ITV+DLLAAD+NNNGFI
Sbjct: 114 WLLFSTLAVARAFLYLAEARIDKRHRRITKWVLHREITVEDLLAADINNNGFI 166


>ref|XP_002274039.1| PREDICTED: probable calcium-activated outward-rectifying potassium
           channel 5, chloroplastic [Vitis vinifera]
          Length = 390

 Score =  191 bits (484), Expect = 7e-47
 Identities = 95/113 (84%), Positives = 102/113 (90%)
 Frame = +2

Query: 2   KVGFALGVVVLCIGSGIMILCFVEKLSWIDSVYLSVMSVTTVGYGDRAFKTLAGRLFASI 181
           KVG ALGVVVLCIG G M+L FVE L WID+VYLSVMSVT+VGYGDRAFKTL GRLFA+I
Sbjct: 229 KVGLALGVVVLCIGMGTMVLYFVENLDWIDAVYLSVMSVTSVGYGDRAFKTLPGRLFAAI 288

Query: 182 WLLFSTLAVARAFLYLAEARIGKRQRRIVKWVLQRDITVQDLLAADVNNNGFI 340
           WLLFSTLAVARAFLYLAEARI KR RRI KWVL R+ITV+DLLAAD+NNNGFI
Sbjct: 289 WLLFSTLAVARAFLYLAEARIDKRHRRITKWVLHREITVEDLLAADINNNGFI 341


>ref|XP_002320260.1| outward rectifying potassium channel [Populus trichocarpa]
           gi|222861033|gb|EEE98575.1| outward rectifying potassium
           channel [Populus trichocarpa]
          Length = 318

 Score =  185 bits (470), Expect = 3e-45
 Identities = 93/113 (82%), Positives = 100/113 (88%)
 Frame = +2

Query: 2   KVGFALGVVVLCIGSGIMILCFVEKLSWIDSVYLSVMSVTTVGYGDRAFKTLAGRLFASI 181
           KVG ALGVVVLCIG G ++L F+E L WIDSVYL+VMSVTTVGYGDRAFKTL GRLFA+I
Sbjct: 161 KVGLALGVVVLCIGIGTLVLYFLEDLDWIDSVYLAVMSVTTVGYGDRAFKTLPGRLFAAI 220

Query: 182 WLLFSTLAVARAFLYLAEARIGKRQRRIVKWVLQRDITVQDLLAADVNNNGFI 340
           WLL STLAVARAFLYLAEARI KR RRI  WVL RDITV+DLLAAD+NNNGFI
Sbjct: 221 WLLVSTLAVARAFLYLAEARIDKRHRRITNWVLHRDITVEDLLAADMNNNGFI 273


>ref|XP_002302805.1| outward rectifying potassium channel [Populus trichocarpa]
           gi|222844531|gb|EEE82078.1| outward rectifying potassium
           channel [Populus trichocarpa]
          Length = 379

 Score =  182 bits (463), Expect = 2e-44
 Identities = 91/113 (80%), Positives = 100/113 (88%)
 Frame = +2

Query: 2   KVGFALGVVVLCIGSGIMILCFVEKLSWIDSVYLSVMSVTTVGYGDRAFKTLAGRLFASI 181
           KVG ALGVV+LCIG G ++L F+E L WIDSVYL+VMSVTTVGYGDRAFK+L GRLFA+I
Sbjct: 218 KVGLALGVVILCIGIGTLVLYFLEDLDWIDSVYLAVMSVTTVGYGDRAFKSLPGRLFAAI 277

Query: 182 WLLFSTLAVARAFLYLAEARIGKRQRRIVKWVLQRDITVQDLLAADVNNNGFI 340
           WLL STLAVARAFLYLAEARI KR RRI  WVL RDITV+DLLAAD+NNNGFI
Sbjct: 278 WLLVSTLAVARAFLYLAEARIDKRHRRISNWVLHRDITVEDLLAADMNNNGFI 330


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