BLASTX nr result

ID: Coptis25_contig00003360 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003360
         (1029 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17930.3| unnamed protein product [Vitis vinifera]              343   5e-92
ref|XP_002275197.2| PREDICTED: protein OSB2, chloroplastic [Viti...   342   9e-92
ref|XP_002302076.1| predicted protein [Populus trichocarpa] gi|2...   329   6e-88
ref|XP_004146958.1| PREDICTED: protein OSB2, chloroplastic-like ...   325   8e-87
ref|XP_002306816.1| predicted protein [Populus trichocarpa] gi|2...   325   1e-86

>emb|CBI17930.3| unnamed protein product [Vitis vinifera]
          Length = 286

 Score =  343 bits (879), Expect = 5e-92
 Identities = 161/228 (70%), Positives = 191/228 (83%)
 Frame = -2

Query: 869 LAYPKPTEIPWNKELCNSVHLIGVVGTPVQVKHLTSGKVLAWTRLAVKKSATDTSWINLT 690
           ++YP+P+E+PW KELCNSV LIG+VG PV++KHL+SGKVLAWTRLAV+KSA+DT+WINLT
Sbjct: 63  VSYPRPSEVPWKKELCNSVSLIGIVGAPVEIKHLSSGKVLAWTRLAVRKSASDTTWINLT 122

Query: 689 FWNELAHVASQHVEKGQRVYVSGRLVSDTVEGDDEKTQTYYKVVVQQLNFVEKSFSPVPL 510
           FW+ELAHVASQHVEKGQ++YVSGRLVSDTVE D+ K QTYYKVVVQQLNFVE+SFS    
Sbjct: 123 FWDELAHVASQHVEKGQQIYVSGRLVSDTVENDEGKQQTYYKVVVQQLNFVERSFSSA-- 180

Query: 509 YEQEKNSTISGVRGGSYSNNNTGSTQELWQAFFANPVEWWDNRKNKRNLKYPDFKHKDTG 330
              E NS  +G + GS + N+TGS +ELWQAFFANPV+WWDNRK K+N KYPDFKHKDTG
Sbjct: 181 --DESNSLAAGRKLGSPATNSTGSIEELWQAFFANPVDWWDNRKTKKNPKYPDFKHKDTG 238

Query: 329 ESLWVDAKYNPPWVKSQLAILDSRMESFHASEGGRPVSNMSSDDLTLF 186
           E+LWV+ +YNP WVKSQLAILDSRMESF   +    V+ M+ DD   F
Sbjct: 239 EALWVEGRYNPSWVKSQLAILDSRMESFRDQDARMHVNLMAGDDFMPF 286


>ref|XP_002275197.2| PREDICTED: protein OSB2, chloroplastic [Vitis vinifera]
          Length = 292

 Score =  342 bits (877), Expect = 9e-92
 Identities = 162/230 (70%), Positives = 191/230 (83%), Gaps = 2/230 (0%)
 Frame = -2

Query: 869 LAYPKPTEIPWNKELCNSVHLIGVVGTPVQVKHLTSGKVLAWTRLAVKKSATDTSWINLT 690
           ++YP+P+E+PW KELCNSV LIG+VG PV++KHL+SGKVLAWTRLAV+KSA+DT+WINLT
Sbjct: 63  VSYPRPSEVPWKKELCNSVSLIGIVGAPVEIKHLSSGKVLAWTRLAVRKSASDTTWINLT 122

Query: 689 FWNELAHVASQHVEKGQRVYVSGRLVSDTVEGDDEKTQTYYKVVVQQLNFVEKSFSPVPL 510
           FW+ELAHVASQHVEKGQ++YVSGRLVSDTVE D+ K QTYYKVVVQQLNFVE+SFS    
Sbjct: 123 FWDELAHVASQHVEKGQQIYVSGRLVSDTVENDEGKQQTYYKVVVQQLNFVERSFSSADE 182

Query: 509 YEQ--EKNSTISGVRGGSYSNNNTGSTQELWQAFFANPVEWWDNRKNKRNLKYPDFKHKD 336
                  NST SG + GS + N+TGS +ELWQAFFANPV+WWDNRK K+N KYPDFKHKD
Sbjct: 183 SNSLAAGNSTFSGRKLGSPATNSTGSIEELWQAFFANPVDWWDNRKTKKNPKYPDFKHKD 242

Query: 335 TGESLWVDAKYNPPWVKSQLAILDSRMESFHASEGGRPVSNMSSDDLTLF 186
           TGE+LWV+ +YNP WVKSQLAILDSRMESF   +    V+ M+ DD   F
Sbjct: 243 TGEALWVEGRYNPSWVKSQLAILDSRMESFRDQDARMHVNLMAGDDFMPF 292


>ref|XP_002302076.1| predicted protein [Populus trichocarpa] gi|222843802|gb|EEE81349.1|
           predicted protein [Populus trichocarpa]
          Length = 292

 Score =  329 bits (844), Expect = 6e-88
 Identities = 155/224 (69%), Positives = 186/224 (83%)
 Frame = -2

Query: 869 LAYPKPTEIPWNKELCNSVHLIGVVGTPVQVKHLTSGKVLAWTRLAVKKSATDTSWINLT 690
           + + KP EI WNKELCNSVHLIG+VG PV++KHL SGKV+AWTRLAVKKSATDTSWINLT
Sbjct: 65  VTHAKPAEIQWNKELCNSVHLIGIVGIPVEIKHLPSGKVVAWTRLAVKKSATDTSWINLT 124

Query: 689 FWNELAHVASQHVEKGQRVYVSGRLVSDTVEGDDEKTQTYYKVVVQQLNFVEKSFSPVPL 510
           FW+ELA V SQHVEKGQ++YVSGRL+SD+VE DD K QTYYKVVVQQLNF+E+S SP  L
Sbjct: 125 FWDELAQVVSQHVEKGQQIYVSGRLISDSVENDDGKLQTYYKVVVQQLNFIERS-SPTGL 183

Query: 509 YEQEKNSTISGVRGGSYSNNNTGSTQELWQAFFANPVEWWDNRKNKRNLKYPDFKHKDTG 330
           Y++  N+  +G + G+ + N+ GST+E WQAFFA+P+EWWDNRK+KRN KYPDFKHKDTG
Sbjct: 184 YDRGFNNMEAGRKFGNNTANDMGSTEERWQAFFASPLEWWDNRKDKRNPKYPDFKHKDTG 243

Query: 329 ESLWVDAKYNPPWVKSQLAILDSRMESFHASEGGRPVSNMSSDD 198
           E+LWV+ +YNP WVKSQLAILD RM S    +    +S+MS DD
Sbjct: 244 EALWVEGRYNPSWVKSQLAILDERMGSLRDQDSKLRLSSMSGDD 287


>ref|XP_004146958.1| PREDICTED: protein OSB2, chloroplastic-like [Cucumis sativus]
           gi|449527159|ref|XP_004170580.1| PREDICTED: protein
           OSB2, chloroplastic-like [Cucumis sativus]
          Length = 294

 Score =  325 bits (834), Expect = 8e-87
 Identities = 150/212 (70%), Positives = 179/212 (84%)
 Frame = -2

Query: 869 LAYPKPTEIPWNKELCNSVHLIGVVGTPVQVKHLTSGKVLAWTRLAVKKSATDTSWINLT 690
           + YPKP++IPW KEL NSV LIG VG PV++KHL SGK +AWTRLAV KS+T+TSWI LT
Sbjct: 68  VTYPKPSQIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTETSWIGLT 127

Query: 689 FWNELAHVASQHVEKGQRVYVSGRLVSDTVEGDDEKTQTYYKVVVQQLNFVEKSFSPVPL 510
           FW+ELAH+ASQHV+KG ++YVSGRLV+D VE DD K QTYYKVVVQQLNF+E+S S  P 
Sbjct: 128 FWDELAHIASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIERSNSTAPH 187

Query: 509 YEQEKNSTISGVRGGSYSNNNTGSTQELWQAFFANPVEWWDNRKNKRNLKYPDFKHKDTG 330
           Y+Q+ NS ++G + GS + +NTGSTQELWQAFFANPV+WWDNRKNK+N KYPDFKHKDTG
Sbjct: 188 YDQDSNSIMAGRKPGSGAVDNTGSTQELWQAFFANPVDWWDNRKNKKNPKYPDFKHKDTG 247

Query: 329 ESLWVDAKYNPPWVKSQLAILDSRMESFHASE 234
           E+LWV+ +YNPPWVKSQLA+LD RM S    E
Sbjct: 248 EALWVEGRYNPPWVKSQLALLDMRMGSLDDQE 279


>ref|XP_002306816.1| predicted protein [Populus trichocarpa] gi|222856265|gb|EEE93812.1|
           predicted protein [Populus trichocarpa]
          Length = 292

 Score =  325 bits (832), Expect = 1e-86
 Identities = 151/224 (67%), Positives = 185/224 (82%)
 Frame = -2

Query: 869 LAYPKPTEIPWNKELCNSVHLIGVVGTPVQVKHLTSGKVLAWTRLAVKKSATDTSWINLT 690
           + + KP EI WNKELCNSVHLIG+VGTPV++KHL SGKV+AWTRLAVKKSA DTSWINLT
Sbjct: 65  VTHAKPAEIQWNKELCNSVHLIGIVGTPVEIKHLPSGKVVAWTRLAVKKSANDTSWINLT 124

Query: 689 FWNELAHVASQHVEKGQRVYVSGRLVSDTVEGDDEKTQTYYKVVVQQLNFVEKSFSPVPL 510
           FW++LA V+SQHVEKG ++YVSGRL++D+VE D+ K QTYYKVVVQQLNF+E+S S   L
Sbjct: 125 FWDDLAQVSSQHVEKGHQIYVSGRLITDSVENDEGKLQTYYKVVVQQLNFIERS-SSRGL 183

Query: 509 YEQEKNSTISGVRGGSYSNNNTGSTQELWQAFFANPVEWWDNRKNKRNLKYPDFKHKDTG 330
           Y+ + N+T +G + G+ + N+ GS +E WQAFFANP+EWWDNRK+KRN KYPDFKHKDTG
Sbjct: 184 YDSDFNNTAAGSKFGNNTANDMGSMEERWQAFFANPLEWWDNRKDKRNPKYPDFKHKDTG 243

Query: 329 ESLWVDAKYNPPWVKSQLAILDSRMESFHASEGGRPVSNMSSDD 198
           E+LWV+ +YNPPWVKSQLAILD +M S    +     S+MS DD
Sbjct: 244 EALWVEGRYNPPWVKSQLAILDGQMGSLQDQDSRLHESSMSGDD 287


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