BLASTX nr result

ID: Coptis25_contig00003358 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003358
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274189.1| PREDICTED: UPF0420 protein C16orf58 homolog ...   202   3e-50
ref|NP_172832.3| uncharacterized protein [Arabidopsis thaliana] ...   199   2e-49
ref|XP_002890020.1| hypothetical protein ARALYDRAFT_888749 [Arab...   198   3e-49
ref|XP_003614098.1| hypothetical protein MTR_5g044720 [Medicago ...   197   6e-49
ref|XP_004158245.1| PREDICTED: UPF0420 protein C16orf58 homolog ...   195   4e-48

>ref|XP_002274189.1| PREDICTED: UPF0420 protein C16orf58 homolog [Vitis vinifera]
           gi|297738087|emb|CBI27288.3| unnamed protein product
           [Vitis vinifera]
          Length = 437

 Score =  202 bits (513), Expect = 3e-50
 Identities = 100/114 (87%), Positives = 107/114 (93%)
 Frame = -3

Query: 382 SSLSLQRYGTRFNQVSSRILQAFVPEGFPTSVTPDYVTFQLWDSLQGLSTYIRTMLSTQA 203
           +SLS++R G+RF+ V  RILQAFVPEGFP+SVTPDY  FQLWDSLQGLSTYIRTMLSTQA
Sbjct: 33  TSLSIRRSGSRFSHVWRRILQAFVPEGFPSSVTPDYAPFQLWDSLQGLSTYIRTMLSTQA 92

Query: 202 LLSAIGVGEKSATVIGATFQWFLRDFTGMLGGILFTFYQGSSLDSNAKMWRLVA 41
           LLSAIGVGEKSATVIGATFQWFLRD TGMLGGILFTFYQGS+LDSNAKMWRLVA
Sbjct: 93  LLSAIGVGEKSATVIGATFQWFLRDLTGMLGGILFTFYQGSNLDSNAKMWRLVA 146


>ref|NP_172832.3| uncharacterized protein [Arabidopsis thaliana]
           gi|28393739|gb|AAO42280.1| unknown protein [Arabidopsis
           thaliana] gi|28973405|gb|AAO64027.1| unknown protein
           [Arabidopsis thaliana] gi|332190945|gb|AEE29066.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 440

 Score =  199 bits (506), Expect = 2e-49
 Identities = 99/114 (86%), Positives = 104/114 (91%)
 Frame = -3

Query: 382 SSLSLQRYGTRFNQVSSRILQAFVPEGFPTSVTPDYVTFQLWDSLQGLSTYIRTMLSTQA 203
           SSLS+QR   RFN V  R+LQAFVPEGFP SVTPDYV FQLWD+LQGLSTY + MLSTQA
Sbjct: 35  SSLSIQRSANRFNHVWRRVLQAFVPEGFPGSVTPDYVGFQLWDTLQGLSTYTKMMLSTQA 94

Query: 202 LLSAIGVGEKSATVIGATFQWFLRDFTGMLGGILFTFYQGSSLDSNAKMWRLVA 41
           LLSAIGVGEKSATVIGATFQWFLRDFTGMLGGILFTFYQGS+LDSNAKMWRLVA
Sbjct: 95  LLSAIGVGEKSATVIGATFQWFLRDFTGMLGGILFTFYQGSNLDSNAKMWRLVA 148


>ref|XP_002890020.1| hypothetical protein ARALYDRAFT_888749 [Arabidopsis lyrata subsp.
           lyrata] gi|297335862|gb|EFH66279.1| hypothetical protein
           ARALYDRAFT_888749 [Arabidopsis lyrata subsp. lyrata]
          Length = 440

 Score =  198 bits (504), Expect = 3e-49
 Identities = 98/114 (85%), Positives = 104/114 (91%)
 Frame = -3

Query: 382 SSLSLQRYGTRFNQVSSRILQAFVPEGFPTSVTPDYVTFQLWDSLQGLSTYIRTMLSTQA 203
           +SLS+QR   RFN V  R+LQAFVPEGFP SVTPDYV FQ WD+LQGLSTYI+ MLSTQA
Sbjct: 35  ASLSIQRSANRFNHVWRRVLQAFVPEGFPGSVTPDYVGFQFWDTLQGLSTYIKMMLSTQA 94

Query: 202 LLSAIGVGEKSATVIGATFQWFLRDFTGMLGGILFTFYQGSSLDSNAKMWRLVA 41
           LLSAIGVGEKSATVIGATFQWFLRDFTGMLGGILFTFYQGS+LDSNAKMWRLVA
Sbjct: 95  LLSAIGVGEKSATVIGATFQWFLRDFTGMLGGILFTFYQGSNLDSNAKMWRLVA 148


>ref|XP_003614098.1| hypothetical protein MTR_5g044720 [Medicago truncatula]
           gi|355515433|gb|AES97056.1| hypothetical protein
           MTR_5g044720 [Medicago truncatula]
          Length = 749

 Score =  197 bits (502), Expect = 6e-49
 Identities = 98/114 (85%), Positives = 103/114 (90%)
 Frame = -3

Query: 382 SSLSLQRYGTRFNQVSSRILQAFVPEGFPTSVTPDYVTFQLWDSLQGLSTYIRTMLSTQA 203
           SS S++R G RF  V  R LQAFVPEGFP+SVTPDYV FQ+WD LQGLSTYIRTMLSTQA
Sbjct: 345 SSFSIRRSGARFTHVWRRFLQAFVPEGFPSSVTPDYVPFQIWDLLQGLSTYIRTMLSTQA 404

Query: 202 LLSAIGVGEKSATVIGATFQWFLRDFTGMLGGILFTFYQGSSLDSNAKMWRLVA 41
           LLSAIGVGEKSATVIGATFQWFLRD TGMLGGILFTFYQGS+LDSNAKMWRLVA
Sbjct: 405 LLSAIGVGEKSATVIGATFQWFLRDLTGMLGGILFTFYQGSNLDSNAKMWRLVA 458


>ref|XP_004158245.1| PREDICTED: UPF0420 protein C16orf58 homolog [Cucumis sativus]
          Length = 435

 Score =  195 bits (495), Expect = 4e-48
 Identities = 96/113 (84%), Positives = 102/113 (90%)
 Frame = -3

Query: 379 SLSLQRYGTRFNQVSSRILQAFVPEGFPTSVTPDYVTFQLWDSLQGLSTYIRTMLSTQAL 200
           SL +QR G+RF  V  R   AFVPEGFP+SVTPDYV FQ+WDSLQGLSTYIRTMLSTQAL
Sbjct: 34  SLLIQRSGSRFRLVGRRFFDAFVPEGFPSSVTPDYVPFQIWDSLQGLSTYIRTMLSTQAL 93

Query: 199 LSAIGVGEKSATVIGATFQWFLRDFTGMLGGILFTFYQGSSLDSNAKMWRLVA 41
           LSAIGVGE+SATVIGATFQWFLRD TGMLGGILFTFYQGS+LDSNAKMWRLVA
Sbjct: 94  LSAIGVGEQSATVIGATFQWFLRDLTGMLGGILFTFYQGSNLDSNAKMWRLVA 146


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