BLASTX nr result

ID: Coptis25_contig00003351 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003351
         (890 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE77505.1| unknown [Picea sitchensis]                             157   2e-36
gb|ADE77588.1| unknown [Picea sitchensis]                             155   1e-35
gb|ABK26521.1| unknown [Picea sitchensis]                             153   5e-35
ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containi...   152   1e-34
emb|CBI18900.3| unnamed protein product [Vitis vinifera]              152   1e-34

>gb|ADE77505.1| unknown [Picea sitchensis]
          Length = 514

 Score =  157 bits (398), Expect = 2e-36
 Identities = 79/157 (50%), Positives = 105/157 (66%)
 Frame = +1

Query: 1   GIEPNEVTFVSVLTSCSHCGLVEEGMKYFKMMTDKYGIVPRSDHYACVVDLLGRAGQLTE 180
           GI+PNE++FV VL++CSH GLV EG  YF +MT  YGIVP   HY C++DLLGRAG L E
Sbjct: 238 GIKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDE 297

Query: 181 ALSLLEKIEDEEASSELYGGSIWGALLGACRLYGNVEMGNRVAEKMLESNQQVSETYIAL 360
           A + +  +  E         S+WGALLGACR++GN E+  R+AE +L    Q++  Y+ L
Sbjct: 298 AENFINGMPVEP------DVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLL 351

Query: 361 SNVYAAAGMWDEACRVREKWSKRSGDVGKPGQSRIYI 471
           SN+YAAAG WD+A +VR K  K  G + +PG S I +
Sbjct: 352 SNIYAAAGQWDDAAKVR-KLMKDRGVMKQPGYSWIEV 387


>gb|ADE77588.1| unknown [Picea sitchensis]
          Length = 312

 Score =  155 bits (392), Expect = 1e-35
 Identities = 78/159 (49%), Positives = 108/159 (67%), Gaps = 1/159 (0%)
 Frame = +1

Query: 1   GIEPNEVTFVSVLTSCSHCGLVEEGMKYFKMMTDKYGIVPRSDHYACVVDLLGRAGQLTE 180
           G++PNE+TF+SVL++CSH GLV+EG K +  MT  Y I P  +HYAC+VDLLGRAG L E
Sbjct: 36  GVKPNEITFISVLSACSHAGLVDEGWKCYNCMTLDYAITPTVEHYACMVDLLGRAGHLNE 95

Query: 181 ALSLLEKIEDEEASSELYGGSIWGALLGACRLYGNVEMGNRVAEKMLESNQQVSETYIAL 360
           A   +EK+  E       G S+WGA LG+CR++ N+E+G RVAE +L  +   +  Y+ L
Sbjct: 96  AWDFIEKMPIEP------GASVWGAFLGSCRIHCNIELGERVAELLLNLDPDNAGYYVLL 149

Query: 361 SNVYAAAGMWDEACRVREKWSKRSGDVGK-PGQSRIYIH 474
           SN+YAAAG WD+  +VR+   ++  DV K PG S I ++
Sbjct: 150 SNIYAAAGRWDDVAKVRKMMKEK--DVKKSPGCSLIEVN 186


>gb|ABK26521.1| unknown [Picea sitchensis]
          Length = 370

 Score =  153 bits (387), Expect = 5e-35
 Identities = 70/144 (48%), Positives = 101/144 (70%)
 Frame = +1

Query: 1   GIEPNEVTFVSVLTSCSHCGLVEEGMKYFKMMTDKYGIVPRSDHYACVVDLLGRAGQLTE 180
           G++PN++TFV VL+ CSH GLV+EG  YF  MT  +GI P+++HY+C+VDL GRAG L E
Sbjct: 94  GVKPNQITFVVVLSGCSHAGLVDEGRNYFDSMTRDHGISPKAEHYSCMVDLFGRAGCLDE 153

Query: 181 ALSLLEKIEDEEASSELYGGSIWGALLGACRLYGNVEMGNRVAEKMLESNQQVSETYIAL 360
           AL+ + ++  E         S+WG+LLGACR++GN+E+  R  E+++E   +   TY+ L
Sbjct: 154 ALNFINQMPVEP------NASVWGSLLGACRVHGNIELAERAVEQLIELTPENPGTYVLL 207

Query: 361 SNVYAAAGMWDEACRVREKWSKRS 432
           SN+YAAAG WD+A +VR+    RS
Sbjct: 208 SNIYAAAGRWDDAGKVRKMMKDRS 231


>ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
           mitochondrial-like [Vitis vinifera]
          Length = 694

 Score =  152 bits (383), Expect = 1e-34
 Identities = 71/143 (49%), Positives = 102/143 (71%)
 Frame = +1

Query: 1   GIEPNEVTFVSVLTSCSHCGLVEEGMKYFKMMTDKYGIVPRSDHYACVVDLLGRAGQLTE 180
           G+E + VTF  +L++CSH GLVEEG KYF++M++ Y + PR DHY+C+VDLLGR+G+L +
Sbjct: 418 GVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLED 477

Query: 181 ALSLLEKIEDEEASSELYGGSIWGALLGACRLYGNVEMGNRVAEKMLESNQQVSETYIAL 360
           A  L++ +  E +S       +WGALLGACR+YGNVE+G  VAE++L  +      YI L
Sbjct: 478 AYELIKSMPMEPSS------GVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIML 531

Query: 361 SNVYAAAGMWDEACRVREKWSKR 429
           SN+Y+AAG+W +A +VR    +R
Sbjct: 532 SNIYSAAGLWRDASKVRALMKER 554


>emb|CBI18900.3| unnamed protein product [Vitis vinifera]
          Length = 637

 Score =  152 bits (383), Expect = 1e-34
 Identities = 71/143 (49%), Positives = 102/143 (71%)
 Frame = +1

Query: 1   GIEPNEVTFVSVLTSCSHCGLVEEGMKYFKMMTDKYGIVPRSDHYACVVDLLGRAGQLTE 180
           G+E + VTF  +L++CSH GLVEEG KYF++M++ Y + PR DHY+C+VDLLGR+G+L +
Sbjct: 361 GVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLED 420

Query: 181 ALSLLEKIEDEEASSELYGGSIWGALLGACRLYGNVEMGNRVAEKMLESNQQVSETYIAL 360
           A  L++ +  E +S       +WGALLGACR+YGNVE+G  VAE++L  +      YI L
Sbjct: 421 AYELIKSMPMEPSS------GVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIML 474

Query: 361 SNVYAAAGMWDEACRVREKWSKR 429
           SN+Y+AAG+W +A +VR    +R
Sbjct: 475 SNIYSAAGLWRDASKVRALMKER 497


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