BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003350
         (901 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA11766.1| high mobility group protein [Canavalia gladiata]...   123   5e-26
dbj|BAA11767.1| high mobility group protein [Canavalia gladiata]...   122   1e-25
ref|XP_004145857.1| PREDICTED: HMG-Y-related protein A-like [Cuc...   115   1e-23
ref|XP_002302948.1| high mobility group family [Populus trichoca...   112   1e-22
emb|CAA61747.1| HMGI/Y [Pisum sativum] gi|1435175|emb|CAA67752.1...   111   3e-22

>dbj|BAA11766.1| high mobility group protein [Canavalia gladiata]
           gi|1483173|dbj|BAA13133.1| high mobility group protein
           [Canavalia gladiata]
          Length = 178

 Score =  123 bits (309), Expect = 5e-26
 Identities = 55/77 (71%), Positives = 67/77 (87%)
 Frame = -1

Query: 790 MATEEVNKPPSLPPYSEMIFAAIDSLNDKNGSNRSAISTYIESTYGDLPEAHFNIMTEHL 611
           MATEEVNKPPSLPPY EM+  A+D+LN+ +GSN+SAIS YIESTYG+LP+ H  ++  HL
Sbjct: 1   MATEEVNKPPSLPPYPEMVMKALDALNEPSGSNKSAISKYIESTYGELPDGHATLLAHHL 60

Query: 610 NKLKDSGEVVFLKNNYM 560
           NK+KDSGE+VFLKNNYM
Sbjct: 61  NKMKDSGELVFLKNNYM 77


>dbj|BAA11767.1| high mobility group protein [Canavalia gladiata]
           gi|1483175|dbj|BAA13134.1| high mobility group protein
           [Canavalia gladiata]
          Length = 178

 Score =  122 bits (305), Expect = 1e-25
 Identities = 56/77 (72%), Positives = 67/77 (87%)
 Frame = -1

Query: 790 MATEEVNKPPSLPPYSEMIFAAIDSLNDKNGSNRSAISTYIESTYGDLPEAHFNIMTEHL 611
           MATEEVNKPPSLPPY+EMI  A+DSLN+ NGSN+SAIS YIEST G+LP+ H  ++  HL
Sbjct: 1   MATEEVNKPPSLPPYTEMITKALDSLNEPNGSNKSAISKYIESTCGELPDGHSTLLAHHL 60

Query: 610 NKLKDSGEVVFLKNNYM 560
           NK+K+SGE+VFLKNNYM
Sbjct: 61  NKMKESGELVFLKNNYM 77


>ref|XP_004145857.1| PREDICTED: HMG-Y-related protein A-like [Cucumis sativus]
           gi|449484561|ref|XP_004156916.1| PREDICTED:
           HMG-Y-related protein A-like [Cucumis sativus]
          Length = 180

 Score =  115 bits (289), Expect = 1e-23
 Identities = 53/77 (68%), Positives = 64/77 (83%)
 Frame = -1

Query: 790 MATEEVNKPPSLPPYSEMIFAAIDSLNDKNGSNRSAISTYIESTYGDLPEAHFNIMTEHL 611
           MAT+EVNKPPSLPPY EMIF AI++LN  NGSN+S IS YIESTYG+LP  H +++T HL
Sbjct: 1   MATQEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHL 60

Query: 610 NKLKDSGEVVFLKNNYM 560
           N +K SG++VF KNNYM
Sbjct: 61  NMMKASGDLVFWKNNYM 77


>ref|XP_002302948.1| high mobility group family [Populus trichocarpa]
           gi|222844674|gb|EEE82221.1| high mobility group family
           [Populus trichocarpa]
          Length = 190

 Score =  112 bits (280), Expect = 1e-22
 Identities = 49/77 (63%), Positives = 64/77 (83%)
 Frame = -1

Query: 790 MATEEVNKPPSLPPYSEMIFAAIDSLNDKNGSNRSAISTYIESTYGDLPEAHFNIMTEHL 611
           MA EE+NKPPSLPPY EMI +AI++LN+ NG N+++IS YIES YGDLP  H  +++ HL
Sbjct: 1   MAAEEINKPPSLPPYPEMILSAIEALNEANGCNKTSISKYIESKYGDLPAGHTALLSHHL 60

Query: 610 NKLKDSGEVVFLKNNYM 560
           N++KD+GE+VF KNNYM
Sbjct: 61  NRMKDTGELVFWKNNYM 77


>emb|CAA61747.1| HMGI/Y [Pisum sativum] gi|1435175|emb|CAA67752.1| HMG-I/Y [Pisum
           sativum]
          Length = 197

 Score =  111 bits (277), Expect = 3e-22
 Identities = 51/77 (66%), Positives = 63/77 (81%)
 Frame = -1

Query: 790 MATEEVNKPPSLPPYSEMIFAAIDSLNDKNGSNRSAISTYIESTYGDLPEAHFNIMTEHL 611
           MAT EVNKP SLPPY E+I  AIDSLN+ NGSN+SAIS YIES YG+LPE H  ++  HL
Sbjct: 1   MATREVNKPLSLPPYPELILKAIDSLNEPNGSNKSAISNYIESVYGELPEGHSVVLLYHL 60

Query: 610 NKLKDSGEVVFLKNNYM 560
           N++K+SG++VF KNNY+
Sbjct: 61  NQMKESGDLVFAKNNYL 77