BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003345
         (1283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321563.1| predicted protein [Populus trichocarpa] gi|2...   354   3e-95
ref|XP_002280597.1| PREDICTED: U-box domain-containing protein 4...   338   2e-90
ref|XP_002511457.1| ubiquitin-protein ligase, putative [Ricinus ...   338   2e-90
emb|CBI34978.3| unnamed protein product [Vitis vinifera]              335   1e-89
ref|XP_002318018.1| predicted protein [Populus trichocarpa] gi|2...   332   2e-88

>ref|XP_002321563.1| predicted protein [Populus trichocarpa] gi|222868559|gb|EEF05690.1|
            predicted protein [Populus trichocarpa]
          Length = 537

 Score =  354 bits (908), Expect = 3e-95
 Identities = 197/321 (61%), Positives = 239/321 (74%), Gaps = 2/321 (0%)
 Frame = -1

Query: 1274 EEEEIVMKLKSTQVFEQEEGVVSLRKLTRMREELRVLLCTPRLLSALRSLMXXXXXXXXX 1095
            EE+EIV KLKS  V +QE+G++SLRK+TR +EE RV LCTPRLLSALR+L          
Sbjct: 220  EEDEIVEKLKSLDVRDQEQGLISLRKITRTKEETRVSLCTPRLLSALRTLFPSRYFSVQT 279

Query: 1094 XXXXXXXNISLEKSNKVKIVRCGIVPVLIDVLKGGFNEAQEHAAGALFSLALDDDNKMAI 915
                   N+SLEK NKVKIVR G +P+LIDVLKGGF+EAQEHAAGALFSLAL+D+NKMAI
Sbjct: 280  NAIASLVNLSLEKVNKVKIVRSGFIPLLIDVLKGGFDEAQEHAAGALFSLALEDENKMAI 339

Query: 914  GVLGALEPLVHMLRCDSERARNDSALALYHLSLVNSNRVKLVKLGAVSVLLSLVKVGELA 735
            GVLGAL+PL+HMLR +SERAR+DS+LALYHLSL+ SNRVKLVKLGAVS+LLS+VK G+LA
Sbjct: 340  GVLGALQPLMHMLRAESERARHDSSLALYHLSLIQSNRVKLVKLGAVSMLLSMVKSGDLA 399

Query: 734  SRALLILCNLAVCDEGRSVMLDENAVECFFGMLKDGDLKSASSVRENCVAALYSLSLGSL 555
            SR LL+LCNLA C+EGRS MLD NAV    G+L++G    +  +RENCVAAL++LS GS+
Sbjct: 400  SRLLLVLCNLAACNEGRSAMLDANAVAILVGILREGGGGDSEVIRENCVAALFALSHGSM 459

Query: 554  RFKSLAKDAGAREVLVEVAEKGSDRXXXXXXXXXXXXXERTGREGDEEIDWESVMNSGVV 375
            RFK LAK+A A EVL E+ E+GS+R              R   E DE+I WE V+ SG +
Sbjct: 460  RFKGLAKEARAVEVLREIEERGSNRAREKAKRILMMMRGRD--EEDEDICWEEVLESGGI 517

Query: 374  SRIHQYRLGVGDC--ANSTGF 318
            SR  +YR G  +    NST F
Sbjct: 518  SRT-RYRAGGRNLPGPNSTNF 537


>ref|XP_002280597.1| PREDICTED: U-box domain-containing protein 40 [Vitis vinifera]
          Length = 519

 Score =  338 bits (867), Expect = 2e-90
 Identities = 190/322 (59%), Positives = 228/322 (70%)
 Frame = -1

Query: 1283 SCSEEEEIVMKLKSTQVFEQEEGVVSLRKLTRMREELRVLLCTPRLLSALRSLMXXXXXX 1104
            S  E+E I+ KLKS QVFEQEE +VSLRK+TR  EE RV LC+PRLLS LRSL+      
Sbjct: 203  SPEEDEGIIAKLKSPQVFEQEEALVSLRKITRTGEETRVSLCSPRLLSMLRSLIISRYSG 262

Query: 1103 XXXXXXXXXXNISLEKSNKVKIVRCGIVPVLIDVLKGGFNEAQEHAAGALFSLALDDDNK 924
                      N+SLEK NKVKIVR GIVP LIDVLKGGF EAQ+HAAGALFSLAL+D NK
Sbjct: 263  IQVNAVAVLVNLSLEKINKVKIVRSGIVPPLIDVLKGGFPEAQDHAAGALFSLALEDANK 322

Query: 923  MAIGVLGALEPLVHMLRCDSERARNDSALALYHLSLVNSNRVKLVKLGAVSVLLSLVKVG 744
             AIGVLGAL PL+H LR +SERARNDSALALYHLSLV SNR KLVKLGAV +L+ +V  G
Sbjct: 323  TAIGVLGALPPLLHTLRSESERARNDSALALYHLSLVQSNRTKLVKLGAVQILMGMVNSG 382

Query: 743  ELASRALLILCNLAVCDEGRSVMLDENAVECFFGMLKDGDLKSASSVRENCVAALYSLSL 564
             L SRALL+LCNLA C +GR+ MLD  AVEC  G+L+  +L S  S+RE+C+AALY+LS 
Sbjct: 383  HLWSRALLVLCNLAACPDGRTAMLDAGAVECLVGLLRGNELDS-DSIRESCLAALYALSF 441

Query: 563  GSLRFKSLAKDAGAREVLVEVAEKGSDRXXXXXXXXXXXXXERTGREGDEEIDWESVMNS 384
            G  RFK LAK+AGA E L+ V + GS+R             E+T    +E +DWE++++S
Sbjct: 442  GGSRFKGLAKEAGAMETLMRVEKIGSERAREKAKKILEIMREKT----EEGLDWEALLDS 497

Query: 383  GVVSRIHQYRLGVGDCANSTGF 318
            G+VSR   + L      NS+ F
Sbjct: 498  GLVSRTRYWPLQDRSSVNSSEF 519


>ref|XP_002511457.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223550572|gb|EEF52059.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 518

 Score =  338 bits (866), Expect = 2e-90
 Identities = 192/314 (61%), Positives = 227/314 (72%)
 Frame = -1

Query: 1283 SCSEEEEIVMKLKSTQVFEQEEGVVSLRKLTRMREELRVLLCTPRLLSALRSLMXXXXXX 1104
            S  EEEEIV+KL S +V +QEEGV+ LRK+TR +EELRV L T RLLSALRSL+      
Sbjct: 202  SIPEEEEIVVKLSSLEVHQQEEGVIQLRKITRAKEELRVALATSRLLSALRSLIASRYSV 261

Query: 1103 XXXXXXXXXXNISLEKSNKVKIVRCGIVPVLIDVLKGGFNEAQEHAAGALFSLALDDDNK 924
                      N+SLEKSNKVKIVR G VP+LIDVLK G +E QEHAAGALFSLAL D+NK
Sbjct: 262  VQTNSIASLVNLSLEKSNKVKIVRSGFVPLLIDVLKAGSSEPQEHAAGALFSLALQDENK 321

Query: 923  MAIGVLGALEPLVHMLRCDSERARNDSALALYHLSLVNSNRVKLVKLGAVSVLLSLVKVG 744
            MAIGVLGAL+PL+H LR +SER R+DSALALYHL+L+ SNRVKLVKLGAV+ LLS++K G
Sbjct: 322  MAIGVLGALQPLMHALRSESERTRHDSALALYHLTLIQSNRVKLVKLGAVATLLSMLKSG 381

Query: 743  ELASRALLILCNLAVCDEGRSVMLDENAVECFFGMLKDGDLKSASSVRENCVAALYSLSL 564
            ELASR LLILCNLA C+EGRS MLD NAV    GML++     + + RENCVAAL++LS 
Sbjct: 382  ELASRLLLILCNLAACNEGRSAMLDGNAVGILVGMLRES--SDSEATRENCVAALFALSH 439

Query: 563  GSLRFKSLAKDAGAREVLVEVAEKGSDRXXXXXXXXXXXXXERTGREGDEEIDWESVMNS 384
            GSLRFK LAK+A A EVL  + E+GSDR                GR  +EE DWE V+ S
Sbjct: 440  GSLRFKGLAKEARAVEVLRAIEERGSDR---AREKAKKILQFMRGRNEEEEDDWEGVLES 496

Query: 383  GVVSRIHQYRLGVG 342
            G     ++YR+G G
Sbjct: 497  G----RNRYRVGGG 506


>emb|CBI34978.3| unnamed protein product [Vitis vinifera]
          Length = 683

 Score =  335 bits (860), Expect = 1e-89
 Identities = 187/311 (60%), Positives = 224/311 (72%)
 Frame = -1

Query: 1283 SCSEEEEIVMKLKSTQVFEQEEGVVSLRKLTRMREELRVLLCTPRLLSALRSLMXXXXXX 1104
            S  E+E I+ KLKS QVFEQEE +VSLRK+TR  EE RV LC+PRLLS LRSL+      
Sbjct: 164  SPEEDEGIIAKLKSPQVFEQEEALVSLRKITRTGEETRVSLCSPRLLSMLRSLIISRYSG 223

Query: 1103 XXXXXXXXXXNISLEKSNKVKIVRCGIVPVLIDVLKGGFNEAQEHAAGALFSLALDDDNK 924
                      N+SLEK NKVKIVR GIVP LIDVLKGGF EAQ+HAAGALFSLAL+D NK
Sbjct: 224  IQVNAVAVLVNLSLEKINKVKIVRSGIVPPLIDVLKGGFPEAQDHAAGALFSLALEDANK 283

Query: 923  MAIGVLGALEPLVHMLRCDSERARNDSALALYHLSLVNSNRVKLVKLGAVSVLLSLVKVG 744
             AIGVLGAL PL+H LR +SERARNDSALALYHLSLV SNR KLVKLGAV +L+ +V  G
Sbjct: 284  TAIGVLGALPPLLHTLRSESERARNDSALALYHLSLVQSNRTKLVKLGAVQILMGMVNSG 343

Query: 743  ELASRALLILCNLAVCDEGRSVMLDENAVECFFGMLKDGDLKSASSVRENCVAALYSLSL 564
             L SRALL+LCNLA C +GR+ MLD  AVEC  G+L+  +L S  S+RE+C+AALY+LS 
Sbjct: 344  HLWSRALLVLCNLAACPDGRTAMLDAGAVECLVGLLRGNELDS-DSIRESCLAALYALSF 402

Query: 563  GSLRFKSLAKDAGAREVLVEVAEKGSDRXXXXXXXXXXXXXERTGREGDEEIDWESVMNS 384
            G  RFK LAK+AGA E L+ V + GS+R             E+T    +E +DWE++++S
Sbjct: 403  GGSRFKGLAKEAGAMETLMRVEKIGSERAREKAKKILEIMREKT----EEGLDWEALLDS 458

Query: 383  GVVSRIHQYRL 351
            G+VSR   + L
Sbjct: 459  GLVSRTRYWPL 469


>ref|XP_002318018.1| predicted protein [Populus trichocarpa] gi|222858691|gb|EEE96238.1|
            predicted protein [Populus trichocarpa]
          Length = 477

 Score =  332 bits (850), Expect = 2e-88
 Identities = 180/304 (59%), Positives = 224/304 (73%), Gaps = 3/304 (0%)
 Frame = -1

Query: 1283 SCS-EEEEIVMKLKSTQVFEQEEGVVSLRKLTRMREELRVLLCTPRLLSALRSLMXXXXX 1107
            SCS EE+EIV KLKS  V +QEEGV+ LRK+TR + E+RV LCTPRLL ALR+L+     
Sbjct: 172  SCSREEDEIVEKLKSVDVRDQEEGVIWLRKITRTKVEIRVSLCTPRLLPALRALIASRHF 231

Query: 1106 XXXXXXXXXXXNISLEKSNKVKIVRCGIVPVLIDVLKGGFNEAQEHAAGALFSLALDDDN 927
                       N+SLEK+NKVKIVR G +P+LIDVLKGGF+EAQEHAAGA FSLAL+D N
Sbjct: 232  VVKTNAIASLVNLSLEKANKVKIVRSGFIPILIDVLKGGFSEAQEHAAGAFFSLALEDQN 291

Query: 926  KMAIGVLGALEPLVHMLRCDSERARNDSALALYHLSLVNSNRVKLVKLGAVSVLLSLVKV 747
            +MAIGVLGAL+PL+  L+ +SERAR+DSA+ALYHLSL+ SNRVKLVKLGAVS+LLS+V  
Sbjct: 292  RMAIGVLGALQPLMQALKAESERARHDSAMALYHLSLMQSNRVKLVKLGAVSMLLSMVNS 351

Query: 746  GELASRALLILCNLAVCDEGRSVMLDENAVECFFGMLKDGDLKSASSVRENCVAALYSLS 567
            G+LASR LL+LCNLA C+EGRS MLD NAV    G+L++G    +  ++E+CVAAL++LS
Sbjct: 352  GDLASRLLLVLCNLAACNEGRSAMLDSNAVAILVGILREGGGGHSEVIQESCVAALFALS 411

Query: 566  LGSLRFKSLAKDAGAREVLVEVAEKGSDRXXXXXXXXXXXXXERTGR--EGDEEIDWESV 393
             GS+RFK LAK+A A EVL E+ E+GS R               +    E +EE+DWE V
Sbjct: 412  HGSMRFKGLAKEARAEEVLREIEERGSKRAREKAKRILMMMMRGSNEEVEWEEEVDWEEV 471

Query: 392  MNSG 381
            +  G
Sbjct: 472  LGFG 475