BLASTX nr result

ID: Coptis25_contig00003337 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003337
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310160.1| predicted protein [Populus trichocarpa] gi|2...    69   3e-10
ref|XP_002337493.1| predicted protein [Populus trichocarpa] gi|2...    69   3e-10
emb|CAN70298.1| hypothetical protein VITISV_001396 [Vitis vinifera]    67   1e-09
emb|CAN82791.1| hypothetical protein VITISV_033795 [Vitis vinifera]    66   3e-09
emb|CAN78357.1| hypothetical protein VITISV_033647 [Vitis vinifera]    65   4e-09

>ref|XP_002310160.1| predicted protein [Populus trichocarpa] gi|222853063|gb|EEE90610.1|
           predicted protein [Populus trichocarpa]
          Length = 106

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 32/80 (40%), Positives = 54/80 (67%), Gaps = 4/80 (5%)
 Frame = -2

Query: 263 GRLIPSYYNELVAMFQEIDKRVTSQNNSVEAVVHETSTMSRMRVHMFLRGLD----QVRG 96
           GR + +YY +L+ +FQE+D R  ++    + V+    ++ R+RVH+FL GLD    Q++G
Sbjct: 2   GRPLSTYYGDLMEIFQELDHRDRTKMKDPDDVITYRRSVERLRVHVFLNGLDAEFEQIQG 61

Query: 95  EILRKEPKFSLEQSYAYIRK 36
           EILRK+P   LE+++ Y+R+
Sbjct: 62  EILRKDPVLDLEEAHTYVRR 81


>ref|XP_002337493.1| predicted protein [Populus trichocarpa] gi|222839466|gb|EEE77803.1|
           predicted protein [Populus trichocarpa]
          Length = 127

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 4/80 (5%)
 Frame = -2

Query: 281 FEAKQNGRLIPSYYNELVAMFQEIDKRVTSQNNSVEAVVHETSTMSRMRVHMFLRGLD-- 108
           F  KQ GRL+  YY +LV +FQE+D R  +     E V+    ++ R+RVH+FL GLD  
Sbjct: 38  FSLKQMGRLLSIYYGDLVEIFQELDHRDRTIMKDPEDVITYRKSVERLRVHIFLNGLDAE 97

Query: 107 --QVRGEILRKEPKFSLEQS 54
             Q++GEILRK+P   LE++
Sbjct: 98  FEQIQGEILRKDPILDLEEA 117


>emb|CAN70298.1| hypothetical protein VITISV_001396 [Vitis vinifera]
          Length = 1507

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 38/86 (44%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
 Frame = -2

Query: 281 FEAKQNGRLIPSYYNELVAMFQEIDKRVTSQNNSVEAVVHETSTMSRMRVHMFLRGL--- 111
           F AKQNGR +  YY EL  +F E+D R        + +     ++ R  VH+FL GL   
Sbjct: 122 FIAKQNGRSLSEYYGELTELFCELDHRDKVVMKDPKDIATYRKSIERQPVHIFLAGLGGD 181

Query: 110 -DQVRGEILRKEPKFSLEQSYAYIRK 36
            +QVRGEILRK+P   LE+ YA IR+
Sbjct: 182 FEQVRGEILRKDPLPDLEECYALIRR 207


>emb|CAN82791.1| hypothetical protein VITISV_033795 [Vitis vinifera]
          Length = 314

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 37/86 (43%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
 Frame = -2

Query: 281 FEAKQNGRLIPSYYNELVAMFQEIDKRVTSQNNSVEAVVHETSTMSRMRVHMFLRGL--- 111
           F AKQN + +  YY EL  +F E+D R        E +     ++ R RV++FL GL   
Sbjct: 120 FTAKQNDKSLSEYYGELTELFCELDHRDKVVMKDPEDIAAYRKSIERQRVNIFLAGLGGD 179

Query: 110 -DQVRGEILRKEPKFSLEQSYAYIRK 36
            +QVRGEILRK+P   LE+ YA IR+
Sbjct: 180 FEQVRGEILRKDPLPDLEECYALIRR 205


>emb|CAN78357.1| hypothetical protein VITISV_033647 [Vitis vinifera]
          Length = 1156

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 38/86 (44%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
 Frame = -2

Query: 281 FEAKQNGRLIPSYYNELVAMFQEIDKRVTSQNNSVEAVVHETSTMSRMRVHMFLRGLD-- 108
           F AKQ+GR +  YY EL   F E+D R        E +     ++ R RVH+FL  LD  
Sbjct: 220 FTAKQSGRSLFEYYGELTEFFCELDHRDKVVMKDPEDIAAYQKSIERQRVHIFLARLDGN 279

Query: 107 --QVRGEILRKEPKFSLEQSYAYIRK 36
             QVRGEILRK+P   LE+ YA I++
Sbjct: 280 IEQVRGEILRKDPLPDLEECYALIQR 305


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