BLASTX nr result

ID: Coptis25_contig00003328 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003328
         (828 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADA79524.1| chloroplast acyl-ACP thioesterase [Macadamia tetr...   266   5e-69
gb|AEX99667.1| acyl-ACP-thioesterase B [Citrus sinensis]              251   1e-64
gb|ABU96744.1| chloroplast acyl-ACP thioesterase [Jatropha curca...   249   4e-64
emb|CAN81819.1| hypothetical protein VITISV_008781 [Vitis vinifera]   247   2e-63
ref|XP_002284850.1| PREDICTED: myristoyl-acyl carrier protein th...   247   3e-63

>gb|ADA79524.1| chloroplast acyl-ACP thioesterase [Macadamia tetraphylla]
          Length = 416

 Score =  266 bits (679), Expect = 5e-69
 Identities = 140/209 (66%), Positives = 161/209 (77%), Gaps = 2/209 (0%)
 Frame = -1

Query: 645 GGSDNLETRGINSSKPASLSGGLKVKANAQASPKINGTITYPPAK--NEEMSTSSVPART 472
           GGSDNL+++GI S K AS SGGL VK NAQA PKINGT      +   +E +TSS P RT
Sbjct: 27  GGSDNLDSQGIKS-KFASSSGGLHVKTNAQAPPKINGTSVGLATEVLKKEDATSSPPPRT 85

Query: 471 FINQLPDWSVLLTAITAMFLAAEN*WTLLDWKPRRSDMLVDPFGLGKIVQDGLVFQQNFS 292
           FINQLPDWSVLL AIT +FLAAE  WTL+DWKPRR DMLVDPFGLG+IV+DGLVF QNFS
Sbjct: 86  FINQLPDWSVLLAAITTIFLAAEKQWTLIDWKPRRPDMLVDPFGLGRIVEDGLVFSQNFS 145

Query: 291 IRSYEIGVDGTTSIESFMNHLQETALNHAKTVGLLGDGFGSTEAMTSRNLIWVVAKMQIS 112
           IRSYEIG D T SIE+ MNHLQETALNH ++ GLLGDGFGST  M+SRNLIWVV KMQ+ 
Sbjct: 146 IRSYEIGADQTASIETMMNHLQETALNHVRSAGLLGDGFGSTPEMSSRNLIWVVTKMQVL 205

Query: 111 VNRYPTCNTIRSL*WIW*ASNLRDGSRED 25
           VNRYPT   +  +   W  ++ ++G R D
Sbjct: 206 VNRYPTWGDLVQV-DTWVGASGKNGMRRD 233


>gb|AEX99667.1| acyl-ACP-thioesterase B [Citrus sinensis]
          Length = 418

 Score =  251 bits (641), Expect = 1e-64
 Identities = 130/208 (62%), Positives = 156/208 (75%), Gaps = 5/208 (2%)
 Frame = -1

Query: 633 NLETRGINSSKPASLSGGLKVKANAQASPKINGT---ITYPPA--KNEEMSTSSVPARTF 469
           NL +  +   K  S SG L+VKANAQA  KINGT   +T P    KN ++STSS P RTF
Sbjct: 26  NLGSANLGGIKSKSSSGSLQVKANAQAPSKINGTSVGLTTPAESLKNGDISTSSPPPRTF 85

Query: 468 INQLPDWSVLLTAITAMFLAAEN*WTLLDWKPRRSDMLVDPFGLGKIVQDGLVFQQNFSI 289
           INQLPDWS+LL AIT +FLAAE  W +LDWKPRRSDMLVDPFG+GKIVQDG +F+QNFSI
Sbjct: 86  INQLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRSDMLVDPFGIGKIVQDGFIFRQNFSI 145

Query: 288 RSYEIGVDGTTSIESFMNHLQETALNHAKTVGLLGDGFGSTEAMTSRNLIWVVAKMQISV 109
           RSYEIG DGT SIE+ MNHLQETALNH  T GLL  GFG+T AM  +NLIWVV +MQ+ V
Sbjct: 146 RSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVV 205

Query: 108 NRYPTCNTIRSL*WIW*ASNLRDGSRED 25
           +RYPT N + ++   W +++ ++G R D
Sbjct: 206 DRYPTWNDVVNV-ETWVSASGKNGMRRD 232


>gb|ABU96744.1| chloroplast acyl-ACP thioesterase [Jatropha curcas]
           gi|248570279|gb|ACT09366.1| stearoyl
           acyl-ACP-thioesterase [Jatropha curcas]
          Length = 418

 Score =  249 bits (637), Expect = 4e-64
 Identities = 136/213 (63%), Positives = 157/213 (73%), Gaps = 5/213 (2%)
 Frame = -1

Query: 648 KGGSDNLETRGINSSKPASLSGGLKVKANAQASPKING-----TITYPPAKNEEMSTSSV 484
           K GS +    GI S KPAS SGGL+VKANAQA PKING     T      KNE   T S 
Sbjct: 24  KIGSGSASLGGIKS-KPAS-SGGLQVKANAQAPPKINGSTVGYTTPVDSVKNEG-DTPSP 80

Query: 483 PARTFINQLPDWSVLLTAITAMFLAAEN*WTLLDWKPRRSDMLVDPFGLGKIVQDGLVFQ 304
           P RTFINQLPDWS+LL AIT +FLAAE  W +LDWKPRR DML+DPFGLG+IVQDGLVF+
Sbjct: 81  PPRTFINQLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRPDMLIDPFGLGRIVQDGLVFR 140

Query: 303 QNFSIRSYEIGVDGTTSIESFMNHLQETALNHAKTVGLLGDGFGSTEAMTSRNLIWVVAK 124
           QNFSIRSYEIG D T SIE+ MNHLQETALNH KT GLLG+GFGST  M+ RNLIWVV +
Sbjct: 141 QNFSIRSYEIGADRTASIETLMNHLQETALNHVKTAGLLGEGFGSTPEMSKRNLIWVVTR 200

Query: 123 MQISVNRYPTCNTIRSL*WIW*ASNLRDGSRED 25
           MQ+ V+RYPT   +  +   W +++ ++G R D
Sbjct: 201 MQVLVDRYPTWGDVVEV-DTWVSASGKNGMRRD 232


>emb|CAN81819.1| hypothetical protein VITISV_008781 [Vitis vinifera]
          Length = 400

 Score =  247 bits (631), Expect = 2e-63
 Identities = 133/216 (61%), Positives = 154/216 (71%), Gaps = 4/216 (1%)
 Frame = -1

Query: 660 KAAMKGGSDNLETRGINSSKPASLSGGLKVKANAQASPKINGTITYPPAKNE----EMST 493
           K + K G  +   RGI S    S  G L+VKANAQA PKINGT     +  E    E   
Sbjct: 23  KPSTKPGXGSAILRGIKSRNAPS--GSLQVKANAQAPPKINGTTVGYTSSAEGVKIEDDM 80

Query: 492 SSVPARTFINQLPDWSVLLTAITAMFLAAEN*WTLLDWKPRRSDMLVDPFGLGKIVQDGL 313
           SS P RTFINQLPDWS+LL AIT +FLAAE  W +LDWKPRRSDML+DPFGLGKIVQDGL
Sbjct: 81  SSPPPRTFINQLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRSDMLIDPFGLGKIVQDGL 140

Query: 312 VFQQNFSIRSYEIGVDGTTSIESFMNHLQETALNHAKTVGLLGDGFGSTEAMTSRNLIWV 133
           VF+QNFSIRSYEIG D T SIE+ MNHLQETALNH +T GLLGDGFGST  M+ RNLIWV
Sbjct: 141 VFRQNFSIRSYEIGADRTASIETLMNHLQETALNHVRTAGLLGDGFGSTPEMSIRNLIWV 200

Query: 132 VAKMQISVNRYPTCNTIRSL*WIW*ASNLRDGSRED 25
           V +MQ+ V+RYPT   +  +   W  ++ ++G R D
Sbjct: 201 VTRMQVVVDRYPTWGDVVQV-DTWVCASGKNGMRRD 235


>ref|XP_002284850.1| PREDICTED: myristoyl-acyl carrier protein thioesterase,
           chloroplastic [Vitis vinifera]
          Length = 421

 Score =  247 bits (630), Expect = 3e-63
 Identities = 133/216 (61%), Positives = 154/216 (71%), Gaps = 4/216 (1%)
 Frame = -1

Query: 660 KAAMKGGSDNLETRGINSSKPASLSGGLKVKANAQASPKINGTITYPPAKNE----EMST 493
           K + K G  +   RGI S    S  G L+VKANAQA PKINGT     +  E    E   
Sbjct: 23  KPSTKPGVGSAILRGIKSRNAPS--GSLQVKANAQAPPKINGTTVGYTSSAEGVKIEDDM 80

Query: 492 SSVPARTFINQLPDWSVLLTAITAMFLAAEN*WTLLDWKPRRSDMLVDPFGLGKIVQDGL 313
           SS P RTFINQLPDWS+LL AIT +FLAAE  W +LDWKPRRSDML+DPFGLGKIVQDGL
Sbjct: 81  SSPPPRTFINQLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRSDMLIDPFGLGKIVQDGL 140

Query: 312 VFQQNFSIRSYEIGVDGTTSIESFMNHLQETALNHAKTVGLLGDGFGSTEAMTSRNLIWV 133
           VF+QNFSIRSYEIG D T SIE+ MNHLQETALNH +T GLLGDGFGST  M+ RNLIWV
Sbjct: 141 VFRQNFSIRSYEIGADRTASIETLMNHLQETALNHVRTAGLLGDGFGSTPEMSIRNLIWV 200

Query: 132 VAKMQISVNRYPTCNTIRSL*WIW*ASNLRDGSRED 25
           V +MQ+ V+RYPT   +  +   W  ++ ++G R D
Sbjct: 201 VTRMQVVVDRYPTWGDVVQV-DTWVCASGKNGMRRD 235


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