BLASTX nr result

ID: Coptis25_contig00003320 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003320
         (1388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272463.2| PREDICTED: uncharacterized protein LOC100261...   328   3e-87
ref|XP_004158919.1| PREDICTED: uncharacterized protein LOC101229...   286   7e-75
ref|XP_003521244.1| PREDICTED: uncharacterized protein LOC100795...   266   9e-69
ref|XP_002889442.1| hypothetical protein ARALYDRAFT_470297 [Arab...   263   1e-67
ref|NP_171817.2| uncharacterized protein [Arabidopsis thaliana] ...   258   2e-66

>ref|XP_002272463.2| PREDICTED: uncharacterized protein LOC100261429 [Vitis vinifera]
            gi|296086737|emb|CBI32372.3| unnamed protein product
            [Vitis vinifera]
          Length = 276

 Score =  328 bits (840), Expect = 3e-87
 Identities = 168/276 (60%), Positives = 216/276 (78%), Gaps = 6/276 (2%)
 Frame = -2

Query: 1300 MGEGRS---ITEIKTSLEKLDGAVIYHVVKDLIGFILYMHQQIPSILQDLSDEFHALQIE 1130
            M  GRS   +TEI T ++ +D ++++HVVKD++GF+LYMHQQIPSILQD+S EF AL  E
Sbjct: 1    MEGGRSEMGVTEIVTPVDSMDCSLVFHVVKDVLGFVLYMHQQIPSILQDISVEFDALHTE 60

Query: 1129 RKDLELISTQSEVKASSRRNQIGRMREVKQGLKRMEKLMNTLASLNTAIQLMLNESHNIE 950
             K+LE++ T++EV ASSRR +IGRMREV+QG++R++K M+  + L TA+QLML+E  +I+
Sbjct: 61   FKELEVVPTETEV-ASSRRKRIGRMREVRQGIRRLQKFMDAFSGLQTALQLMLSEVPDIQ 119

Query: 949  GVMLVLGSSPIRPQQVYEMFFSHGSFVAEHTIDYNKSKAAETLSRKAIRALVSDGAGSVS 770
            G++LVLG+SPIRPQ VYE  FSHG  V     ++ KS+AAE LSRKAIRAL+S GAGS S
Sbjct: 120  GIILVLGASPIRPQHVYEFRFSHGRVVPGGACNFIKSRAAEGLSRKAIRALISKGAGSAS 179

Query: 769  YAGPTKLFLLAKAPATFNLPLHFLPKRDFRYSKKIVPFKLCIKCKVREQDMDT---SECC 599
            Y GPTKLFLL +A ++FNLPLHFLPKRDFRYSKKI+PF+L +KC+ R Q+MDT       
Sbjct: 180  YTGPTKLFLLVRASSSFNLPLHFLPKRDFRYSKKIIPFRLQLKCRTRNQEMDTPHHDSQT 239

Query: 598  ASSSSIGLPVATSNDSIWFQCRHAIKGLTLKIPSPE 491
            A+SSSI L  ++S+D IWFQCRH IKGL  K PS E
Sbjct: 240  ANSSSINLTDSSSDDLIWFQCRHVIKGLASKAPSME 275


>ref|XP_004158919.1| PREDICTED: uncharacterized protein LOC101229071 [Cucumis sativus]
          Length = 269

 Score =  286 bits (733), Expect = 7e-75
 Identities = 145/266 (54%), Positives = 190/266 (71%), Gaps = 3/266 (1%)
 Frame = -2

Query: 1279 TEIKTSLEKLDGAVIYHVVKDLIGFILYMHQQIPSILQDLSDEFHALQIERKDLELISTQ 1100
            TEI++S +  D +++++++ D+  F+LYMHQQ+PS LQD+S EF  L  E K+L     Q
Sbjct: 4    TEIESSTDCFDSSILFNIINDVSAFVLYMHQQVPSTLQDMSIEFDTLHEEYKELGSELEQ 63

Query: 1099 SEVKASSRRNQIGRMREVKQGLKRMEKLMNTLASLNTAIQLMLNESHNIEGVMLVLGSSP 920
            +E+KASSRR   GRMREV+QG+KRMEKLMN+++    AI+ +++E+ NIE V+L+LG++P
Sbjct: 64   NELKASSRRKHTGRMREVRQGIKRMEKLMNSVSGFQVAIKSLISEAPNIEEVLLILGATP 123

Query: 919  IRPQQVYEMFFSHGSFVAEHTIDYNKSKAAETLSRKAIRALVSDGAGSVSYAGPTKLFLL 740
            +RPQ VYEM FSH  F      ++ K KAAE LSRKAIR L+S  AGSVSY GPTKLFLL
Sbjct: 124  LRPQYVYEMCFSHKRFALRGADNFAKHKAAEVLSRKAIRTLISKDAGSVSYPGPTKLFLL 183

Query: 739  AKAPATFNLPLHFLPKRDFRYSKKIVPFKLCIKCKVREQDM---DTSECCASSSSIGLPV 569
             KAP++FNLPLHF+PKR+FRYS+KIVPFKL  KCK + Q M   D        +S  L  
Sbjct: 184  VKAPSSFNLPLHFIPKREFRYSRKIVPFKLRFKCKAQIQQMKHPDHDRESQVGNSDDLTN 243

Query: 568  ATSNDSIWFQCRHAIKGLTLKIPSPE 491
            ++  D IWFQCRHAIKGL    P  +
Sbjct: 244  SSVEDPIWFQCRHAIKGLAFNRPDED 269


>ref|XP_003521244.1| PREDICTED: uncharacterized protein LOC100795646 [Glycine max]
          Length = 259

 Score =  266 bits (680), Expect = 9e-69
 Identities = 131/262 (50%), Positives = 187/262 (71%)
 Frame = -2

Query: 1276 EIKTSLEKLDGAVIYHVVKDLIGFILYMHQQIPSILQDLSDEFHALQIERKDLELISTQS 1097
            EI T+ +  DG+ ++H + D++GF+LYMHQQIPS +QD+S EF A+  E K LE+    +
Sbjct: 14   EIYTASDTFDGSAVFHTIYDVVGFVLYMHQQIPSTVQDMSVEFDAMHSEYKQLEM-ELGT 72

Query: 1096 EVKASSRRNQIGRMREVKQGLKRMEKLMNTLASLNTAIQLMLNESHNIEGVMLVLGSSPI 917
            EVK S RR  + +MR++K G+KR++KLMN+L ++ TA ++M++E   I+GV+L LG+SP+
Sbjct: 73   EVKPSFRRKHVSKMRDIKVGIKRLDKLMNSLLNVQTAFKIMISEIPTIDGVVLALGASPL 132

Query: 916  RPQQVYEMFFSHGSFVAEHTIDYNKSKAAETLSRKAIRALVSDGAGSVSYAGPTKLFLLA 737
            RP+ +Y + FSH S V++   D+ +SKAA+TLSRKAIR L+S  AGSV+Y GP KLF+L 
Sbjct: 133  RPKHIYVLNFSHESGVSKVDDDFARSKAADTLSRKAIRTLISKDAGSVTYPGPIKLFVLI 192

Query: 736  KAPATFNLPLHFLPKRDFRYSKKIVPFKLCIKCKVREQDMDTSECCASSSSIGLPVATSN 557
            KAP++FN P+HFLPKRDFRY++K+VP  L  KC+ ++Q++                AT+ 
Sbjct: 193  KAPSSFNQPMHFLPKRDFRYNRKVVPLGLLFKCRNQDQEV---------------TATTE 237

Query: 556  DSIWFQCRHAIKGLTLKIPSPE 491
            D IWFQCRH IKGL +  P PE
Sbjct: 238  DLIWFQCRHVIKGLAMN-PMPE 258


>ref|XP_002889442.1| hypothetical protein ARALYDRAFT_470297 [Arabidopsis lyrata subsp.
            lyrata] gi|297335284|gb|EFH65701.1| hypothetical protein
            ARALYDRAFT_470297 [Arabidopsis lyrata subsp. lyrata]
          Length = 263

 Score =  263 bits (671), Expect = 1e-67
 Identities = 139/277 (50%), Positives = 181/277 (65%), Gaps = 7/277 (2%)
 Frame = -2

Query: 1300 MGEGRSITE------IKTSLEKLDGAVIYHVVKDLIGFILYMHQQIPSILQDLSDEFHAL 1139
            M EG   TE      I T+   L G+ ++H++ D++GF+LYMHQQIPS++QD+S EF  L
Sbjct: 1    MAEGEGTTEENYDVDIATTASSLGGSGVFHIINDIVGFVLYMHQQIPSVIQDMSLEFDGL 60

Query: 1138 QIERKDLELISTQSEVKASSRRNQIGRMREVKQGLKRMEKLMNTLASLNTAIQLMLNESH 959
            Q E  DLE   TQ +VK   RR  + R REVK  +K++EKLM T++SL +A+QLM+ E+ 
Sbjct: 61   QTELTDLEANLTQPQVKPLVRRKLVSRKREVKNEIKKLEKLMKTISSLRSALQLMIREAP 120

Query: 958  NIEGVMLVLGSSPIRPQQVYEMFFS-HGSFVAEHTIDYNKSKAAETLSRKAIRALVSDGA 782
            +I+ V+L+LG SP+RPQ+ YE+ F+ H   +  +  D+ KSKAAE LS+K IRAL+S GA
Sbjct: 121  DIQKVVLILGGSPLRPQKAYELLFTQHSDSLLGYEGDFAKSKAAEALSKKTIRALISAGA 180

Query: 781  GSVSYAGPTKLFLLAKAPATFNLPLHFLPKRDFRYSKKIVPFKLCIKCKVREQDMDTSEC 602
            GS SY GP +LF+L  AP T NLP HFLPKRDFRY++K VP KL  KC  R QD  T+  
Sbjct: 181  GSTSYPGPMRLFILVHAPPTLNLPQHFLPKRDFRYNRKFVPSKLRFKC--RTQDNATNS- 237

Query: 601  CASSSSIGLPVATSNDSIWFQCRHAIKGLTLKIPSPE 491
                         +ND IWFQCRH IKGL    P  E
Sbjct: 238  -----------PPTNDLIWFQCRHVIKGLAFHQPVEE 263


>ref|NP_171817.2| uncharacterized protein [Arabidopsis thaliana]
            gi|55978665|gb|AAV68794.1| hypothetical protein AT1G03180
            [Arabidopsis thaliana] gi|60547521|gb|AAX23724.1|
            hypothetical protein At1g03180 [Arabidopsis thaliana]
            gi|332189419|gb|AEE27540.1| uncharacterized protein
            [Arabidopsis thaliana]
          Length = 265

 Score =  258 bits (660), Expect = 2e-66
 Identities = 138/279 (49%), Positives = 179/279 (64%), Gaps = 7/279 (2%)
 Frame = -2

Query: 1306 LEMGEGRSITE------IKTSLEKLDGAVIYHVVKDLIGFILYMHQQIPSILQDLSDEFH 1145
            +EM EG   TE      I T+   L G+ ++H++ D++GF+LYMHQQIPS+LQD+S EF 
Sbjct: 1    MEMAEGEGTTEENYDVDIATTASSLGGSGVFHIINDIVGFVLYMHQQIPSVLQDMSLEFE 60

Query: 1144 ALQIERKDLELISTQSEVKASSRRNQIGRMREVKQGLKRMEKLMNTLASLNTAIQLMLNE 965
             LQ E  DLE    + +VK   RR  + R REVK  +K++EKLM T++SL +A+QLM+ E
Sbjct: 61   GLQTEFMDLETNLAEPQVKPLVRRKLMSRKREVKNEIKKLEKLMKTISSLRSALQLMIRE 120

Query: 964  SHNIEGVMLVLGSSPIRPQQVYEMFFS-HGSFVAEHTIDYNKSKAAETLSRKAIRALVSD 788
            +  I+ V+L+LG SP+RPQ  YE+ F+     V  +  D+ KSKAAE LS+K IRAL+S 
Sbjct: 121  APGIQKVVLILGGSPLRPQNAYELLFTQRRDHVLGYEGDFAKSKAAEALSKKTIRALIST 180

Query: 787  GAGSVSYAGPTKLFLLAKAPATFNLPLHFLPKRDFRYSKKIVPFKLCIKCKVREQDMDTS 608
            GAGS SY GP +LF+L  AP T NLP HFLPKRDFRY++K VP KL  KC  R QD  T+
Sbjct: 181  GAGSTSYPGPMRLFILVHAPPTLNLPQHFLPKRDFRYNRKFVPSKLRFKC--RTQDNATN 238

Query: 607  ECCASSSSIGLPVATSNDSIWFQCRHAIKGLTLKIPSPE 491
                           +ND IW+QCRH IKGL    P  E
Sbjct: 239  S------------PPTNDLIWYQCRHVIKGLAFHQPVEE 265


Top