BLASTX nr result

ID: Coptis25_contig00003311 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003311
         (946 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265147.1| PREDICTED: uncharacterized protein LOC100252...   164   2e-38
ref|XP_002271817.1| PREDICTED: uncharacterized protein LOC100241...   164   3e-38
ref|XP_002317195.1| predicted protein [Populus trichocarpa] gi|2...   162   1e-37
gb|ABK96787.1| unknown [Populus trichocarpa x Populus deltoides]      160   4e-37
ref|XP_003549610.1| PREDICTED: uncharacterized protein LOC100777...   154   2e-35

>ref|XP_002265147.1| PREDICTED: uncharacterized protein LOC100252669 [Vitis vinifera]
          Length = 195

 Score =  164 bits (416), Expect = 2e-38
 Identities = 101/205 (49%), Positives = 121/205 (59%), Gaps = 2/205 (0%)
 Frame = -2

Query: 783 MKKLGKKGKVHPSPL-LISD-HLAFLPATIFTLTAALSLEDKEVLAYLISCSNFPTNKKA 610
           MKKL +KG VHPSP  +ISD HLAFLP+ I TL AALS ED+EVLAYL+SCS   T    
Sbjct: 1   MKKLYRKGTVHPSPPPVISDQHLAFLPSAILTLAAALSPEDREVLAYLLSCSG--TYTSG 58

Query: 609 NHKNSFKSVCGGGGASGKEHPPLFYCNCFRCYTSYWVRWDASPNRQLIHDVIDAFEDELL 430
           N K + +        SG +HPPLF CNCFRCYTSYWV+WD+SPNRQLIH++IDA ED L+
Sbjct: 59  NRKTTTQK-------SG-DHPPLFNCNCFRCYTSYWVKWDSSPNRQLIHEIIDAVEDGLV 110

Query: 429 EXXXXXXXXXXXXKGCDNGSDDLKRFEDDSNRGKSSDQCEXXXXXXXXXXXXXXXXXXXX 250
           +            KGC  GSD+LK+ +  S + +   Q E                    
Sbjct: 111 QSKNPKSRKERRRKGC-TGSDELKQSKLSSGKDELG-QPESVAETSGNGGGDDYEGCGDD 168

Query: 249 XXXXXXXXSVRKLVSFIGETIWGVW 175
                   SVRK VSF+GE IWGVW
Sbjct: 169 GEEGSEKGSVRKFVSFLGERIWGVW 193


>ref|XP_002271817.1| PREDICTED: uncharacterized protein LOC100241366 [Vitis vinifera]
          Length = 208

 Score =  164 bits (415), Expect = 3e-38
 Identities = 104/217 (47%), Positives = 115/217 (52%), Gaps = 14/217 (6%)
 Frame = -2

Query: 783 MKKLGKKGKVHPSPLL-ISDHLAFLPATIFTLTAALSLEDKEVLAYLISCSNFPTNKKAN 607
           MKKL +KGKVHPSP   ISDHLA LPATI TLTAALS EDK+VLAYLISCS    N+K  
Sbjct: 1   MKKLYRKGKVHPSPPPPISDHLALLPATILTLTAALSPEDKQVLAYLISCSAASPNRKPT 60

Query: 606 HKNSFKSVCGGGGASGKEHPPLFYCNCFRCYTSYWVRWDASPNRQLIHDVIDAFEDELLE 427
            K S   V  GGG  G +H P+F C+CFRCY SYW RWD SPNRQLIH++IDA+ED L +
Sbjct: 61  QKTS---VSAGGG--GVDHQPIFNCDCFRCYMSYWARWDTSPNRQLIHEIIDAYEDGLFQ 115

Query: 426 XXXXXXXXXXXXKGCDNGSDDLK-------RFEDDSNRGKSSDQCE------XXXXXXXX 286
                       KG      D K          DDS  GK  +  E              
Sbjct: 116 ------EKKKKTKGAKTKRSDSKIKNRAAQELNDDSGFGKEGESGELESVEASCSGGGGG 169

Query: 285 XXXXXXXXXXXXXXXXXXXXSVRKLVSFIGETIWGVW 175
                               SVR LVSFIGE  WGVW
Sbjct: 170 EVGSCGEVGGGEGEMGLEKGSVRGLVSFIGERFWGVW 206


>ref|XP_002317195.1| predicted protein [Populus trichocarpa] gi|222860260|gb|EEE97807.1|
           predicted protein [Populus trichocarpa]
          Length = 205

 Score =  162 bits (410), Expect = 1e-37
 Identities = 100/216 (46%), Positives = 119/216 (55%), Gaps = 14/216 (6%)
 Frame = -2

Query: 783 MKKLGKKGKVHPSPLLISDHLAFLPATIFTLTAALSLEDKEVLAYLISCSNFPTNKKANH 604
           MKKL +KG VHPSP +ISDHL+FLPATI TLTAALS ED+EVLAYLISCS+         
Sbjct: 1   MKKLYRKGTVHPSPPIISDHLSFLPATILTLTAALSPEDREVLAYLISCSS--------- 51

Query: 603 KNSFKSVCGGGGASGKEHPPLFYCNCFRCYTSYWVRWDASPNRQLIHDVIDAFEDELLE- 427
             S   +C    +S  +HPP+F C+CFRCY SYW+RWD+SPNRQLIH++IDAFED LL+ 
Sbjct: 52  --SNNILCSNCSSSNNDHPPMFNCDCFRCYMSYWIRWDSSPNRQLIHEIIDAFEDWLLKQ 109

Query: 426 -----XXXXXXXXXXXXKGCDNGSDDL-KRFE-------DDSNRGKSSDQCEXXXXXXXX 286
                            KG   GS +L KR E       D+SN     +           
Sbjct: 110 GKSSSSSGKKNKKDRKRKGNSQGSGELIKRVELRMKHRMDESN--SVDENRSGGGGGEVA 167

Query: 285 XXXXXXXXXXXXXXXXXXXXSVRKLVSFIGETIWGV 178
                               SVR+ VSFIGE IWGV
Sbjct: 168 AAAAAGGGGGCGEEEVTDKGSVRRFVSFIGERIWGV 203


>gb|ABK96787.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 222

 Score =  160 bits (405), Expect = 4e-37
 Identities = 100/221 (45%), Positives = 120/221 (54%), Gaps = 19/221 (8%)
 Frame = -2

Query: 783 MKKLGKKGKVHPSPLLISDHLAFLPATIFTLTAALSLEDKEVLAYLISCSNFPTNKKANH 604
           MKKL +KGKVHPS  +ISDHLAFLP TI  LTAALS ED+EVLAYLISCS       +N 
Sbjct: 1   MKKLYRKGKVHPSTPVISDHLAFLPVTILALTAALSPEDREVLAYLISCSGNNNIFYSNW 60

Query: 603 KN--SFKSVCG-----------GGGASGKEHPPLFYCNCFRCYTSYWVRWDASPNRQLIH 463
            N  S KS C               +S  +HPP+F C+CFRCY SYW+RWD+SPNRQLIH
Sbjct: 61  SNINSRKSSCNQKTTSYTKSSSSSSSSSHDHPPMFNCDCFRCYMSYWIRWDSSPNRQLIH 120

Query: 462 DVIDAFEDELLE------XXXXXXXXXXXXKGCDNGSDDLKRFEDDSNRGKSSDQCEXXX 301
           ++IDAFED LL+                  KG   GS +L +  +   + K  D+ +   
Sbjct: 121 EIIDAFEDWLLKQGKSGATSGNKNRKDRKRKGNSRGSGELIKRPELRMKDKQLDESD-SL 179

Query: 300 XXXXXXXXXXXXXXXXXXXXXXXXXSVRKLVSFIGETIWGV 178
                                    SVR+LVSFIGE IWGV
Sbjct: 180 VDGNSSGSGGSEGVGGGGEEGIEKGSVRRLVSFIGERIWGV 220


>ref|XP_003549610.1| PREDICTED: uncharacterized protein LOC100777525 [Glycine max]
          Length = 202

 Score =  154 bits (390), Expect = 2e-35
 Identities = 92/210 (43%), Positives = 113/210 (53%), Gaps = 7/210 (3%)
 Frame = -2

Query: 783 MKKLGKKGKVHPSPL----LISDHLAFLPATIFTLTAALSLEDKEVLAYLISCSNFP--- 625
           MKKL +KG VHPSP      ISDHL+FLPA I TLT +LS +D+EVLAYLISCS+     
Sbjct: 1   MKKLYRKGTVHPSPSPSPPTISDHLSFLPAAILTLTLSLSPKDQEVLAYLISCSSSSSST 60

Query: 624 TNKKANHKNSFKSVCGGGGASGKEHPPLFYCNCFRCYTSYWVRWDASPNRQLIHDVIDAF 445
           TN   NH+ + K V  G      +HPP+F C+CFRCY SYWVRW++SPN QLIH++ID F
Sbjct: 61  TNFSGNHRRNPKVVVDG------DHPPVFNCSCFRCYMSYWVRWNSSPNHQLIHEIIDTF 114

Query: 444 EDELLEXXXXXXXXXXXXKGCDNGSDDLKRFEDDSNRGKSSDQCEXXXXXXXXXXXXXXX 265
           ED L              +G      +L R E  S+  +S  +                 
Sbjct: 115 EDSLAHTTKPSRKDKRNKRGSKTKPSELTRSEFPSSPPESVPESS----SSSAGAGEVEA 170

Query: 264 XXXXXXXXXXXXXSVRKLVSFIGETIWGVW 175
                        SVR+ VSFIGE IWG W
Sbjct: 171 GQGGDGGGDEEKGSVRRFVSFIGERIWGAW 200


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